CircRNA Information

General Information
circRNA Basic Information
CircID chr10:72274020|72274320
Strand +
CircType exon
Host Gene ENSG00000168209.4;
Algorism CIRI2;
Sequence CCCCAGGCTGAGCGCGGCGGCCGATCTGGGGTGGGAGTTCGGGGCAAGGACGAGGGCGAAGAGGAGGTGGACGACGACGAGAAGCGGTCCCAAAGGCTAGGCATGGTGAGGACAGACGCCAGGGCGTTTGCTGATGAACTCAGAGTGCCGGAGCGTAGAAGCCGCTGTAAGACAAGAGGGGGACCGACCAGGCGTCAGTCTGGGGACCAGACCAGACCAGACCGCGAGCTCTAGGACCCACACACAGAAGGGACACTCACCAGCTAGCGCGGTCAGCGAGAACTGCTAAGACAAGTGCGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:72274020|72274320 hsa-miR-511-5p 0 0 1
chr10:72274020|72274320 hsa-miR-511-3p 0 0 1
chr10:72274020|72274320 hsa-miR-545-5p 0 0 1
chr10:72274020|72274320 hsa-miR-545-3p 0 0 1
chr10:72274020|72274320 hsa-miR-600 0 0 1
chr10:72274020|72274320 hsa-miR-661 1 0 1
chr10:72274020|72274320 hsa-miR-1237-5p 0 0 1
chr10:72274020|72274320 hsa-miR-1237-3p 0 0 1
chr10:72274020|72274320 hsa-miR-1249-5p 0 0 1
chr10:72274020|72274320 hsa-miR-1249-3p 0 0 1
chr10:72274020|72274320 hsa-miR-532-3p 1 1 1
chr10:72274020|72274320 hsa-miR-574-5p 0 0 1
chr10:72274020|72274320 hsa-miR-1224-3p 1 1 1
chr10:72274020|72274320 hsa-miR-502-5p 0 0 1
chr10:72274020|72274320 hsa-miR-1302 0 0 1
chr10:72274020|72274320 hsa-miR-574-3p 0 0 1
chr10:72274020|72274320 hsa-miR-521 0 1 1
chr10:72274020|72274320 hsa-miR-1260 0 0 1
chr10:72274020|72274320 hsa-miR-1280 0 0 1
chr10:72274020|72274320 hsa-miR-644 0 0 1
chr10:72274020|72274320 hsa-miR-138 0 0 1
chr10:72274020|72274320 hsa-miR-720 0 0 1
chr10:72274020|72274320 hsa-miR-147 0 0 1
chr10:72274020|72274320 hsa-miR-133b 1 0 0
chr10:72274020|72274320 hsa-miR-636 1 0 0
chr10:72274020|72274320 hsa-miR-638 1 0 0
chr10:72274020|72274320 hsa-miR-1181 1 0 0
chr10:72274020|72274320 hsa-miR-1281 1 0 0
chr10:72274020|72274320 hsa-miR-2117 1 0 0
chr10:72274020|72274320 hsa-miR-718 1 0 0
chr10:72274020|72274320 hsa-miR-3135a 1 0 0
chr10:72274020|72274320 hsa-miR-4325 0 1 0
chr10:72274020|72274320 hsa-miR-3657 0 1 0
chr10:72274020|72274320 hsa-miR-3911 1 0 0
chr10:72274020|72274320 hsa-miR-3921 0 1 0
chr10:72274020|72274320 hsa-miR-4494 0 1 0
chr10:72274020|72274320 hsa-miR-4513 1 1 0
chr10:72274020|72274320 hsa-miR-4658 1 1 0
chr10:72274020|72274320 hsa-miR-4682 0 1 0
chr10:72274020|72274320 hsa-miR-5193 1 1 0
chr10:72274020|72274320 hsa-miR-9899 1 0 0
chr10:72274020|72274320 hsa-miR-9901 1 1 0
chr10:72274020|72274320 hsa-miR-197-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6749-3p 1 0 0
chr10:72274020|72274320 hsa-miR-4665-3p 1 1 0
chr10:72274020|72274320 hsa-miR-6720-5p 1 0 0
chr10:72274020|72274320 hsa-miR-6881-3p 1 1 0
chr10:72274020|72274320 hsa-miR-125a-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6875-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6842-3p 1 0 0
chr10:72274020|72274320 hsa-miR-874-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6726-3p 1 0 0
chr10:72274020|72274320 hsa-miR-1915-5p 1 1 0
chr10:72274020|72274320 hsa-miR-6845-3p 1 0 0
chr10:72274020|72274320 hsa-miR-3663-5p 0 1 0
chr10:72274020|72274320 hsa-miR-6793-5p 1 1 0
chr10:72274020|72274320 hsa-miR-877-3p 1 1 0
chr10:72274020|72274320 hsa-miR-4655-3p 1 1 0
chr10:72274020|72274320 hsa-miR-7855-5p 1 0 0
chr10:72274020|72274320 hsa-miR-6716-3p 0 1 0
chr10:72274020|72274320 hsa-miR-4436b-5p 1 1 0
chr10:72274020|72274320 hsa-miR-6884-3p 1 0 0
chr10:72274020|72274320 hsa-miR-4707-3p 1 0 0
chr10:72274020|72274320 hsa-miR-1908-3p 1 1 0
chr10:72274020|72274320 hsa-miR-6803-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6809-3p 1 0 0
chr10:72274020|72274320 hsa-miR-7111-3p 1 0 0
chr10:72274020|72274320 hsa-miR-5196-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6736-3p 1 0 0
chr10:72274020|72274320 hsa-miR-1306-5p 1 1 0
chr10:72274020|72274320 hsa-miR-6825-3p 0 1 0
chr10:72274020|72274320 hsa-miR-4646-3p 1 0 0
chr10:72274020|72274320 hsa-miR-7152-3p 0 1 0
chr10:72274020|72274320 hsa-miR-1236-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6785-3p 1 0 0
chr10:72274020|72274320 hsa-miR-2114-5p 1 0 0
chr10:72274020|72274320 hsa-miR-1238-3p 1 0 0
chr10:72274020|72274320 hsa-miR-2355-3p 0 1 0
chr10:72274020|72274320 hsa-miR-6752-3p 1 0 0
chr10:72274020|72274320 hsa-miR-7848-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6865-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6886-3p 1 0 0
chr10:72274020|72274320 hsa-miR-5088-3p 1 1 0
chr10:72274020|72274320 hsa-miR-328-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6795-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6880-3p 1 0 0
chr10:72274020|72274320 hsa-miR-1199-3p 0 1 0
chr10:72274020|72274320 hsa-miR-6515-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6789-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6780b-3p 1 0 0
chr10:72274020|72274320 hsa-miR-3617-3p 0 1 0
chr10:72274020|72274320 hsa-miR-3156-3p 0 1 0
chr10:72274020|72274320 hsa-miR-133a-3p 1 0 0
chr10:72274020|72274320 hsa-miR-320a-5p 1 1 0
chr10:72274020|72274320 hsa-miR-6754-3p 1 0 0
chr10:72274020|72274320 hsa-miR-1238-5p 1 0 0
chr10:72274020|72274320 hsa-miR-4758-5p 1 0 0
chr10:72274020|72274320 hsa-miR-10396a-3p 1 0 0
chr10:72274020|72274320 hsa-miR-10396b-3p 1 0 0
chr10:72274020|72274320 hsa-miR-2682-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6753-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6511a-3p 0 1 0
chr10:72274020|72274320 hsa-miR-6756-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6784-3p 0 1 0
chr10:72274020|72274320 hsa-miR-6792-3p 1 0 0
chr10:72274020|72274320 hsa-miR-10401-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6829-3p 1 0 0
chr10:72274020|72274320 hsa-miR-3059-5p 1 0 0
chr10:72274020|72274320 hsa-miR-4723-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6511b-3p 0 1 0
chr10:72274020|72274320 hsa-miR-6769b-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6891-3p 1 0 0
chr10:72274020|72274320 hsa-miR-4701-5p 1 0 0
chr10:72274020|72274320 hsa-miR-1295b-5p 0 1 0
chr10:72274020|72274320 hsa-miR-323b-5p 1 0 0
chr10:72274020|72274320 hsa-miR-6827-3p 1 0 0
chr10:72274020|72274320 hsa-miR-6824-3p 1 0 0
chr10:72274020|72274320 hsa-miR-494-5p 1 0 0
chr10:72274020|72274320 hsa-miR-3913-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:72274020|72274320
ORF Type ORF1
Protein Length 43
Nucleotide Length 132
Protein Sequence MVRTDARAFADELRVPERRSRCKTRGGPTRRQSGDQTRPDREL
Nucleotide Sequence ATGGTGAGGACAGACGCCAGGGCGTTTGCTGATGAACTCAGAGTGCCGGAGCGTAGAAGCCGCTGTAAGACAAGAGGGGGACCGACCAGGCGTCAGTCTGGGGACCAGACCAGACCAGACCGCGAGCTCTAG
CircID chr10:72274020|72274320
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MSAAADLGWEFGARTRAKRRWTTTRSGPKG
Nucleotide Sequence CTGAGCGCGGCGGCCGATCTGGGGTGGGAGTTCGGGGCAAGGACGAGGGCGAAGAGGAGGTGGACGACGACGAGAAGCGGTCCCAAAGGCTAG
CircID chr10:72274020|72274320
ORF Type ORF3
Protein Length 53
Nucleotide Length 162
Protein Sequence MLMNSECRSVEAAVRQEGDRPGVSLGTRPDQTASSRTHTQKGHSPASAVSENC
Nucleotide Sequence TTGCTGATGAACTCAGAGTGCCGGAGCGTAGAAGCCGCTGTAAGACAAGAGGGGGACCGACCAGGCGTCAGTCTGGGGACCAGACCAGACCAGACCGCGAGCTCTAGGACCCACACACAGAAGGGACACTCACCAGCTAGCGCGGTCAGCGAGAACTGCTAA
CircID chr10:72274020|72274320
ORF Type ORF4
Protein Length 35
Nucleotide Length 108
Protein Sequence MCVGPRARGLVWSGPQTDAWSVPLLSYSGFYAPAL
Nucleotide Sequence CTGTGTGTGGGTCCTAGAGCTCGCGGTCTGGTCTGGTCTGGTCCCCAGACTGACGCCTGGTCGGTCCCCCTCTTGTCTTACAGCGGCTTCTACGCTCCGGCACTCTGA
CircID chr10:72274020|72274320
ORF Type ORF5
Protein Length 38
Nucleotide Length 114
Protein Sequence MSSPCLAFGTASRRRPPPLRPRPCPELPPQIGRRAQPG
Nucleotide Sequence CTGTCCTCACCATGCCTAGCCTTTGGGACCGCTTCTCGTCGTCGTCCACCTCCTCTTCGCCCTCGTCCTTGCCCCGAACTCCCACCCCAGATCGGCCGCCGCGCTCAGCCTGGG
CircID chr10:72274020|72274320
ORF Type ORF6
Protein Length 59
Nucleotide Length 180
Protein Sequence MTALAGECPFCVWVLELAVWSGLVPRLTPGRSPSCLTAASTLRHSEFISKRPGVCPHHA
Nucleotide Sequence CTGACCGCGCTAGCTGGTGAGTGTCCCTTCTGTGTGTGGGTCCTAGAGCTCGCGGTCTGGTCTGGTCTGGTCCCCAGACTGACGCCTGGTCGGTCCCCCTCTTGTCTTACAGCGGCTTCTACGCTCCGGCACTCTGAGTTCATCAGCAAACGCCCTGGCGTCTGTCCTCACCATGCCTAG
CircID chr10:72274020|72274320
ORF Type ORF7
Protein Length 31
Nucleotide Length 93
Protein Sequence MGPLLVVVHLLFALVLAPNSHPRSAAALSLG
Nucleotide Sequence TTGGGACCGCTTCTCGTCGTCGTCCACCTCCTCTTCGCCCTCGTCCTTGCCCCGAACTCCCACCCCAGATCGGCCGCCGCGCTCAGCCTGGGG
CircID chr10:72274020|72274320
ORF Type ORF8
Protein Length 63
Nucleotide Length 189
Protein Sequence MVGPPLVLQRLLRSGTLSSSANALASVLTMPSLWDRFSSSSTSSSPSSLPRTPTPDRPPRSAW
Nucleotide Sequence CTGGTCGGTCCCCCTCTTGTCTTACAGCGGCTTCTACGCTCCGGCACTCTGAGTTCATCAGCAAACGCCCTGGCGTCTGTCCTCACCATGCCTAGCCTTTGGGACCGCTTCTCGTCGTCGTCCACCTCCTCTTCGCCCTCGTCCTTGCCCCGAACTCCCACCCCAGATCGGCCGCCGCGCTCAGCCTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab