CircRNA Information

General Information
circRNA Basic Information
CircID chr10:72367800|72367929
Strand +
CircType exon
Host Gene ENSG00000107745.15;
Algorism CIRI2;
Sequence CACCCATTCAAGCATCCTGTGGATAAAGAATTCAGGGAACCATCCACACACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATGGATTTATACTAACAAGAACATTCCTTGACTTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:72367800|72367929 hsa-miR-146a-5p 0 0 1
chr10:72367800|72367929 hsa-miR-146a-3p 0 0 1
chr10:72367800|72367929 hsa-miR-206 0 0 1
chr10:72367800|72367929 hsa-miR-578 0 0 1
chr10:72367800|72367929 hsa-miR-580-5p 0 0 1
chr10:72367800|72367929 hsa-miR-580-3p 0 0 1
chr10:72367800|72367929 hsa-miR-589-5p 0 0 1
chr10:72367800|72367929 hsa-miR-589-3p 0 0 1
chr10:72367800|72367929 hsa-miR-605-5p 0 0 1
chr10:72367800|72367929 hsa-miR-605-3p 0 0 1
chr10:72367800|72367929 hsa-miR-613 0 0 1
chr10:72367800|72367929 hsa-miR-1243 0 0 1
chr10:72367800|72367929 hsa-miR-548p 0 0 1
chr10:72367800|72367929 hsa-miR-296-3p 1 0 1
chr10:72367800|72367929 hsa-miR-1207-5p 0 0 1
chr10:72367800|72367929 hsa-miR-125a-5p 0 0 1
chr10:72367800|72367929 hsa-miR-146b-5p 0 0 1
chr10:72367800|72367929 hsa-miR-516a-3p 0 0 1
chr10:72367800|72367929 hsa-miR-1274a 0 0 1
chr10:72367800|72367929 hsa-miR-125b 0 0 1
chr10:72367800|72367929 hsa-miR-644 0 0 1
chr10:72367800|72367929 hsa-miR-1300 0 0 1
chr10:72367800|72367929 hsa-miR-1 0 0 1
chr10:72367800|72367929 hsa-miR-147 0 0 1
chr10:72367800|72367929 hsa-miR-3131 1 0 0
chr10:72367800|72367929 hsa-miR-3911 1 0 0
chr10:72367800|72367929 hsa-miR-4449 1 0 0
chr10:72367800|72367929 hsa-miR-4498 1 0 0
chr10:72367800|72367929 hsa-miR-4507 1 0 0
chr10:72367800|72367929 hsa-miR-4515 1 0 0
chr10:72367800|72367929 hsa-miR-7704 1 0 0
chr10:72367800|72367929 hsa-miR-12128 1 0 0
chr10:72367800|72367929 hsa-miR-6840-3p 1 0 0
chr10:72367800|72367929 hsa-miR-6799-5p 1 0 0
chr10:72367800|72367929 hsa-miR-6757-5p 1 0 0
chr10:72367800|72367929 hsa-miR-6762-3p 1 0 0
chr10:72367800|72367929 hsa-miR-185-3p 1 0 0
chr10:72367800|72367929 hsa-miR-6782-5p 1 0 0
chr10:72367800|72367929 hsa-miR-5006-5p 1 0 0
chr10:72367800|72367929 hsa-miR-6823-5p 1 0 0
chr10:72367800|72367929 hsa-miR-4787-5p 1 0 0
chr10:72367800|72367929 hsa-miR-4446-3p 1 0 0
chr10:72367800|72367929 hsa-miR-7113-5p 1 0 0
chr10:72367800|72367929 hsa-miR-6893-5p 1 0 0
chr10:72367800|72367929 hsa-miR-6752-5p 1 0 0
chr10:72367800|72367929 hsa-miR-1915-3p 1 0 0
chr10:72367800|72367929 hsa-miR-4685-5p 1 0 0
chr10:72367800|72367929 hsa-miR-3940-5p 1 0 0
chr10:72367800|72367929 hsa-miR-6837-5p 1 0 0
chr10:72367800|72367929 hsa-miR-6764-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr10:72367800|72367929
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MPTLGSIQFSNRFCYGFILTRTFLDF
Nucleotide Sequence CTGCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATGGATTTATACTAACAAGAACATTCCTTGACTTC

CircID chr10:72367800|72367929
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MWIKNSGNHPHTCQPWEASSSQIVFAMDLY
Nucleotide Sequence CTGTGGATAAAGAATTCAGGGAACCATCCACACACCTGCCAACCCTGGGAAGCATCCAGTTCTCAAATCGTTTTTGCTATGGATTTATACTAA

CircID chr10:72367800|72367929
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MDASQGWQVCGWFPEFFIHRMLEWV
Nucleotide Sequence CTGGATGCTTCCCAGGGTTGGCAGGTGTGTGGATGGTTCCCTGAATTCTTTATCCACAGGATGCTTGAATGGGTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites