CircNet

General Information

circRNA Basic Information

CircID	chr10:7276892\|7285954
Strand	-
CircType	exon
Host Gene	ENSG00000198879.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	CAATCAAAGAGAAGTACACAGACTGGACAGAATTTCTCATACGTGACTTGACTGGTTCGAGGACAGCACCCGCCAACCTCCTGGAAGGTGTATGTATTGTTGTTATACATCTAATCCTCTGCGAGGGAAAGGCCCTATAGACCTCATTACAGTTGGTTCCTTAATAGAACTTCAGGATTCCCAGAACCCTTTTCAGTACTGGATAGTTAGTGTGATTGAAAATGTTGGAGGAAGATTACGCCTTCGCTATGTGGGATTGGAGGACACTGAATCCTATGACCAGTGGTTGTTTTACTTGGATTACAGACTTCGACCAGTTGGTTGGTGTCAAGAGAATAAATACAGAATGGACCCACCTTCAGAAATCTATCCTTTGAAGATGGCCTCTGAATGGAAATGTACTCTGGAAAAATCCCTTATTGATGCTGCCAAATTTCCTCTTCCAATGGAAGTGTTTAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr10:7276892\|7285954	hsa-miR-335-5p	0	0	1
chr10:7276892\|7285954	hsa-miR-335-3p	0	0	1
chr10:7276892\|7285954	hsa-miR-605-5p	0	0	1
chr10:7276892\|7285954	hsa-miR-605-3p	0	0	1
chr10:7276892\|7285954	hsa-miR-611	0	0	1
chr10:7276892\|7285954	hsa-miR-943	0	0	1
chr10:7276892\|7285954	hsa-miR-1236-5p	0	0	1
chr10:7276892\|7285954	hsa-miR-1236-3p	0	0	1
chr10:7276892\|7285954	hsa-miR-1238-5p	0	0	1
chr10:7276892\|7285954	hsa-miR-1238-3p	0	0	1
chr10:7276892\|7285954	hsa-miR-1299	0	0	1
chr10:7276892\|7285954	hsa-miR-1224-3p	0	0	1
chr10:7276892\|7285954	hsa-miR-501-5p	0	0	1
chr10:7276892\|7285954	hsa-miR-188-5p	0	0	1
chr10:7276892\|7285954	hsa-miR-875-3p	0	0	1
chr10:7276892\|7285954	hsa-miR-362-5p	0	0	1
chr10:7276892\|7285954	hsa-miR-513a-3p	0	1	1
chr10:7276892\|7285954	hsa-miR-548c-3p	0	0	1
chr10:7276892\|7285954	hsa-miR-151-5p	0	0	1
chr10:7276892\|7285954	hsa-miR-612	1	1	0
chr10:7276892\|7285954	hsa-miR-623	1	0	0
chr10:7276892\|7285954	hsa-miR-3138	1	0	0
chr10:7276892\|7285954	hsa-miR-4298	1	0	0
chr10:7276892\|7285954	hsa-miR-4258	0	1	0
chr10:7276892\|7285954	hsa-miR-4515	1	0	0
chr10:7276892\|7285954	hsa-miR-4672	1	1	0
chr10:7276892\|7285954	hsa-miR-6860	1	0	0
chr10:7276892\|7285954	hsa-miR-3190-3p	0	1	0
chr10:7276892\|7285954	hsa-miR-6770-5p	1	0	0
chr10:7276892\|7285954	hsa-miR-3194-5p	0	1	0
chr10:7276892\|7285954	hsa-miR-6882-3p	1	0	0
chr10:7276892\|7285954	hsa-miR-6871-3p	0	1	0
chr10:7276892\|7285954	hsa-miR-518c-5p	0	1	0
chr10:7276892\|7285954	hsa-miR-514a-5p	0	1	0
chr10:7276892\|7285954	hsa-miR-4520-3p	0	1	0
chr10:7276892\|7285954	hsa-miR-5585-5p	0	1	0
chr10:7276892\|7285954	hsa-miR-6769b-5p	1	0	0
chr10:7276892\|7285954	hsa-miR-5189-5p	1	0	0
chr10:7276892\|7285954	hsa-miR-3187-5p	1	0	0
chr10:7276892\|7285954	hsa-miR-7843-5p	1	1	0
chr10:7276892\|7285954	hsa-miR-6859-5p	1	0	0
chr10:7276892\|7285954	hsa-miR-513c-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr10:7276892\|7285954
ORF Type	ORF1
Protein Length	123
Nucleotide Length	369
Protein Sequence	MYCCYTSNPLRGKGPIDLITVGSLIELQDSQNPFQYWIVSVIENVGGRLRLRYVGLEDTESYDQWLFYLDYRLRPVGWCQENKYRMDPPSEIYPLKMASEWKCTLEKSLIDAAKFPLPMEVFK
Nucleotide Sequence	ATGTATTGTTGTTATACATCTAATCCTCTGCGAGGGAAAGGCCCTATAGACCTCATTACAGTTGGTTCCTTAATAGAACTTCAGGATTCCCAGAACCCTTTTCAGTACTGGATAGTTAGTGTGATTGAAAATGTTGGAGGAAGATTACGCCTTCGCTATGTGGGATTGGAGGACACTGAATCCTATGACCAGTGGTTGTTTTACTTGGATTACAGACTTCGACCAGTTGGTTGGTGTCAAGAGAATAAATACAGAATGGACCCACCTTCAGAAATCTATCCTTTGAAGATGGCCTCTGAATGGAAATGTACTCTGGAAAAATCCCTTATTGATGCTGCCAAATTTCCTCTTCCAATGGAAGTGTTTAAG

CircID	chr10:7276892\|7285954
ORF Type	ORF2
Protein Length	52
Nucleotide Length	156
Protein Sequence	MLEEDYAFAMWDWRTLNPMTSGCFTWITDFDQLVGVKRINTEWTHLQKSIL*
Nucleotide Sequence	ATGTTGGAGGAAGATTACGCCTTCGCTATGTGGGATTGGAGGACACTGAATCCTATGACCAGTGGTTGTTTTACTTGGATTACAGACTTCGACCAGTTGGTTGGTGTCAAGAGAATAAATACAGAATGGACCCACCTTCAGAAATCTATCCTTTGA

CircID	chr10:7276892\|7285954
ORF Type	ORF3
Protein Length	36
Nucleotide Length	108
Protein Sequence	MYNNNTYTFQEVGGCCPRTSQVTYEKFCPVCVLLFD
Nucleotide Sequence	ATGTATAACAACAATACATACACCTTCCAGGAGGTTGGCGGGTGCTGTCCTCGAACCAGTCAAGTCACGTATGAGAAATTCTGTCCAGTCTGTGTACTTCTCTTTGAT

CircID	chr10:7276892\|7285954
ORF Type	ORF1
Protein Length	25
Nucleotide Length	78
Protein Sequence	MTPTNWSKYLPGGWRVLSSNQSSHV
Nucleotide Sequence	TTGACACCAACCAACTGGTCGAAGTACCTTCCAGGAGGTTGGCGGGTGCTGTCCTCGAACCAGTCAAGTCACGTATGA

CircID	chr10:7276892\|7285954
ORF Type	ORF2
Protein Length	48
Nucleotide Length	144
Protein Sequence	MKVGPFCIYSLDTNQLVEVPSRRLAGAVLEPVKSRMRNSVQSVYFSLI
Nucleotide Sequence	CTGAAGGTGGGTCCATTCTGTATTTATTCTCTTGACACCAACCAACTGGTCGAAGTACCTTCCAGGAGGTTGGCGGGTGCTGTCCTCGAACCAGTCAAGTCACGTATGAGAAATTCTGTCCAGTCTGTGTACTTCTCTTTGATT

CircID	chr10:7276892\|7285954
ORF Type	ORF3
Protein Length	64
Nucleotide Length	192
Protein Sequence	MVRGQHPPTSWKVLRPVGWCQENKYRMDPPSEIYPLKMASEWKCTLEKSLIDAAKFPLPMEVFK
Nucleotide Sequence	CTGGTTCGAGGACAGCACCCGCCAACCTCCTGGAAGGTACTTCGACCAGTTGGTTGGTGTCAAGAGAATAAATACAGAATGGACCCACCTTCAGAAATCTATCCTTTGAAGATGGCCTCTGAATGGAAATGTACTCTGGAAAAATCCCTTATTGATGCTGCCAAATTTCCTCTTCCAATGGAAGTGTTTAAG

CircID	chr10:7276892\|7285954
ORF Type	ORF1
Protein Length	38
Nucleotide Length	114
Protein Sequence	MDPPSEIYPLKMASEWKCTLEKSLIDAAKFPLPMEVFK
Nucleotide Sequence	ATGGACCCACCTTCAGAAATCTATCCTTTGAAGATGGCCTCTGAATGGAAATGTACTCTGGAAAAATCCCTTATTGATGCTGCCAAATTTCCTCTTCCAATGGAAGTGTTTAAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr10:7276892\|7285954	NOP56	2	1	0
chr10:7276892\|7285954	MOV10	0	1	3
chr10:7276892\|7285954	ELAVL1	13	8	1
chr10:7276892\|7285954	ELAVL3	1	0	0
chr10:7276892\|7285954	PRPF8	0	2	0
chr10:7276892\|7285954	YTHDF1	0	1	0
chr10:7276892\|7285954	UPF1	1	2	0
chr10:7276892\|7285954	TAF15	0	1	0
chr10:7276892\|7285954	FMR1	0	0	2
chr10:7276892\|7285954	CPSF6	1	0	0
chr10:7276892\|7285954	NUDT21	0	1	0
chr10:7276892\|7285954	FUS	4	2	1
chr10:7276892\|7285954	CPSF7	0	1	0
chr10:7276892\|7285954	SRSF1	3	1	3
chr10:7276892\|7285954	NOP58	5	1	8
chr10:7276892\|7285954	U2AF1	2	0	0
chr10:7276892\|7285954	U2AF2	13	8	8
chr10:7276892\|7285954	DDX54	0	0	2
chr10:7276892\|7285954	EIF3G	1	0	0
chr10:7276892\|7285954	RBM10	11	6	0
chr10:7276892\|7285954	HNRNPM	0	1	0
chr10:7276892\|7285954	FIP1L1	1	1	0
chr10:7276892\|7285954	PTBP1	6	34	0
chr10:7276892\|7285954	HNRNPC	43	60	12
chr10:7276892\|7285954	HNRNPD	1	1	0
chr10:7276892\|7285954	HNRNPA1	7	3	0
chr10:7276892\|7285954	ZC3H7B	1	1	0
chr10:7276892\|7285954	MSI2	0	0	2
chr10:7276892\|7285954	ACIN1	0	0	4
chr10:7276892\|7285954	LIN28B	3	0	0
chr10:7276892\|7285954	IGF2BP1	0	0	2
chr10:7276892\|7285954	IGF2BP3	0	0	2
chr10:7276892\|7285954	IGF2BP2	0	1	11
chr10:7276892\|7285954	FTO	0	1	0
chr10:7276892\|7285954	TARDBP	2	6	1
chr10:7276892\|7285954	YTHDC2	0	2	0
chr10:7276892\|7285954	RBFOX2	1	0	0
chr10:7276892\|7285954	CSTF2T	1	2	0
chr10:7276892\|7285954	SRRM4	2	0	0
chr10:7276892\|7285954	AGO2	0	1	1
chr10:7276892\|7285954	EWSR1	1	1	0
chr10:7276892\|7285954	EIF4A3	6	3	6
chr10:7276892\|7285954	FBL	3	0	5

CircRNA Information