CircRNA Information

General Information
circRNA Basic Information
CircID chr10:73769951|73770339
Strand -
CircType exon
Host Gene ENSG00000176986.13;
Algorism CIRI2;
Sequence AGCTAGTTACCTCCATGGATGTGACTGAGACCAATGTCTTCTTCTACCCTCGGCTCTTACCTTTGGTGCGATTGAGGGTTGGAGTATGAGATCTTGCACGGAGCAAAGGGCCTCTTAGGAGGAGGAAAGGATAGGCTAGTATCAGTCAGACACTAGTGGAATTTGTTTTTATGTATTTTAGCTGATGTAATTTTCACACTGAGAGAGTTACTGAGACCCCAGAAGGGGTGGTGTCTGAGGACTTAGCTTTCAAAATTTTGTGTGTGGTGCGGGGGGGCAGACTTGTCTTATGGTCCTTGGTAACCTTTTGCTCCCTTCCTTTTGTCTAGACAAAGTCTCCCGTTGAGAGTACTACCGAACCACCAGCAGTTCGAGCCTCTGAAGAGCGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:73769951|73770339 hsa-miR-95-5p 0 0 1
chr10:73769951|73770339 hsa-miR-95-3p 0 0 1
chr10:73769951|73770339 hsa-miR-345-5p 0 0 1
chr10:73769951|73770339 hsa-miR-345-3p 0 0 1
chr10:73769951|73770339 hsa-miR-346 1 1 1
chr10:73769951|73770339 hsa-miR-488-5p 0 0 1
chr10:73769951|73770339 hsa-miR-488-3p 0 0 1
chr10:73769951|73770339 hsa-miR-618 0 0 1
chr10:73769951|73770339 hsa-miR-637 0 0 1
chr10:73769951|73770339 hsa-miR-641 0 1 1
chr10:73769951|73770339 hsa-miR-1237-5p 0 0 1
chr10:73769951|73770339 hsa-miR-1237-3p 0 0 1
chr10:73769951|73770339 hsa-miR-1238-5p 0 0 1
chr10:73769951|73770339 hsa-miR-1238-3p 0 0 1
chr10:73769951|73770339 hsa-miR-548m 0 0 1
chr10:73769951|73770339 hsa-miR-548p 0 0 1
chr10:73769951|73770339 hsa-miR-1278 0 0 1
chr10:73769951|73770339 hsa-miR-1324 0 0 1
chr10:73769951|73770339 hsa-miR-615-5p 0 0 1
chr10:73769951|73770339 hsa-miR-508-5p 0 0 1
chr10:73769951|73770339 hsa-miR-501-5p 0 1 1
chr10:73769951|73770339 hsa-miR-409-5p 1 0 1
chr10:73769951|73770339 hsa-miR-876-3p 0 0 1
chr10:73769951|73770339 hsa-miR-324-3p 0 0 1
chr10:73769951|73770339 hsa-miR-362-5p 0 0 1
chr10:73769951|73770339 hsa-miR-548d-3p 0 0 1
chr10:73769951|73770339 hsa-miR-220b 0 0 1
chr10:73769951|73770339 hsa-miR-323-5p 0 0 1
chr10:73769951|73770339 hsa-miR-138 0 0 1
chr10:73769951|73770339 hsa-miR-499-3p 0 0 1
chr10:73769951|73770339 hsa-miR-298 1 0 0
chr10:73769951|73770339 hsa-miR-1470 1 0 0
chr10:73769951|73770339 hsa-miR-1913 1 1 0
chr10:73769951|73770339 hsa-miR-1973 0 1 0
chr10:73769951|73770339 hsa-miR-3132 0 1 0
chr10:73769951|73770339 hsa-miR-3185 0 1 0
chr10:73769951|73770339 hsa-miR-3188 1 1 0
chr10:73769951|73770339 hsa-miR-4313 1 1 0
chr10:73769951|73770339 hsa-miR-4257 0 1 0
chr10:73769951|73770339 hsa-miR-4264 0 1 0
chr10:73769951|73770339 hsa-miR-3714 1 0 0
chr10:73769951|73770339 hsa-miR-3916 0 1 0
chr10:73769951|73770339 hsa-miR-3917 1 0 0
chr10:73769951|73770339 hsa-miR-4439 1 0 0
chr10:73769951|73770339 hsa-miR-2392 1 0 0
chr10:73769951|73770339 hsa-miR-4513 1 0 0
chr10:73769951|73770339 hsa-miR-4533 1 0 0
chr10:73769951|73770339 hsa-miR-4739 1 0 0
chr10:73769951|73770339 hsa-miR-6081 1 0 0
chr10:73769951|73770339 hsa-miR-6090 1 0 0
chr10:73769951|73770339 hsa-miR-6124 1 0 0
chr10:73769951|73770339 hsa-miR-6745 1 1 0
chr10:73769951|73770339 hsa-miR-8085 1 0 0
chr10:73769951|73770339 hsa-miR-8089 1 0 0
chr10:73769951|73770339 hsa-miR-1843 0 1 0
chr10:73769951|73770339 hsa-miR-12127 0 1 0
chr10:73769951|73770339 hsa-miR-6734-5p 1 0 0
chr10:73769951|73770339 hsa-miR-7155-5p 0 1 0
chr10:73769951|73770339 hsa-miR-6836-3p 1 0 0
chr10:73769951|73770339 hsa-miR-6720-5p 1 0 0
chr10:73769951|73770339 hsa-miR-210-5p 1 0 0
chr10:73769951|73770339 hsa-miR-6757-5p 1 0 0
chr10:73769951|73770339 hsa-miR-4653-3p 1 0 0
chr10:73769951|73770339 hsa-miR-6875-3p 1 0 0
chr10:73769951|73770339 hsa-miR-6840-5p 1 0 0
chr10:73769951|73770339 hsa-miR-197-5p 1 1 0
chr10:73769951|73770339 hsa-miR-148a-5p 0 1 0
chr10:73769951|73770339 hsa-miR-4711-5p 0 1 0
chr10:73769951|73770339 hsa-miR-6827-5p 1 0 0
chr10:73769951|73770339 hsa-miR-5008-5p 0 1 0
chr10:73769951|73770339 hsa-miR-6803-3p 1 0 0
chr10:73769951|73770339 hsa-miR-7161-3p 0 1 0
chr10:73769951|73770339 hsa-miR-3202 1 1 0
chr10:73769951|73770339 hsa-miR-6501-5p 1 0 0
chr10:73769951|73770339 hsa-miR-149-3p 1 0 0
chr10:73769951|73770339 hsa-miR-6824-5p 1 0 0
chr10:73769951|73770339 hsa-miR-3162-5p 0 1 0
chr10:73769951|73770339 hsa-miR-6877-5p 1 1 0
chr10:73769951|73770339 hsa-miR-4687-5p 1 0 0
chr10:73769951|73770339 hsa-miR-5571-3p 1 1 0
chr10:73769951|73770339 hsa-miR-6778-3p 1 0 0
chr10:73769951|73770339 hsa-miR-6752-3p 1 0 0
chr10:73769951|73770339 hsa-miR-3605-3p 0 1 0
chr10:73769951|73770339 hsa-miR-5088-3p 1 0 0
chr10:73769951|73770339 hsa-miR-483-5p 1 0 0
chr10:73769951|73770339 hsa-miR-4749-3p 1 0 0
chr10:73769951|73770339 hsa-miR-3124-3p 0 1 0
chr10:73769951|73770339 hsa-miR-6748-3p 0 1 0
chr10:73769951|73770339 hsa-miR-6755-5p 0 1 0
chr10:73769951|73770339 hsa-miR-6851-3p 0 1 0
chr10:73769951|73770339 hsa-miR-3620-3p 1 0 0
chr10:73769951|73770339 hsa-miR-4802-5p 0 1 0
chr10:73769951|73770339 hsa-miR-1343-5p 1 0 0
chr10:73769951|73770339 hsa-miR-5001-5p 1 0 0
chr10:73769951|73770339 hsa-miR-6726-5p 1 0 0
chr10:73769951|73770339 hsa-miR-1249-5p 1 1 0
chr10:73769951|73770339 hsa-miR-6779-5p 1 0 0
chr10:73769951|73770339 hsa-miR-6797-5p 1 0 0
chr10:73769951|73770339 hsa-miR-6808-5p 1 0 0
chr10:73769951|73770339 hsa-miR-3127-3p 0 1 0
chr10:73769951|73770339 hsa-miR-4728-5p 1 0 0
chr10:73769951|73770339 hsa-miR-5196-5p 1 1 0
chr10:73769951|73770339 hsa-miR-6794-5p 1 0 0
chr10:73769951|73770339 hsa-miR-939-5p 1 0 0
chr10:73769951|73770339 hsa-miR-6891-5p 1 0 0
chr10:73769951|73770339 hsa-miR-6766-5p 1 0 0
chr10:73769951|73770339 hsa-miR-6785-5p 1 0 0
chr10:73769951|73770339 hsa-miR-10401-3p 1 0 0
chr10:73769951|73770339 hsa-miR-4691-5p 1 0 0
chr10:73769951|73770339 hsa-miR-122b-5p 0 1 0
chr10:73769951|73770339 hsa-miR-376c-3p 0 1 0
chr10:73769951|73770339 hsa-miR-4704-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr10:73769951|73770339
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MEYEILHGAKGLLGGGKDRLVSVRH
Nucleotide Sequence TTGGAGTATGAGATCTTGCACGGAGCAAAGGGCCTCTTAGGAGGAGGAAAGGATAGGCTAGTATCAGTCAGACACTAG
CircID chr10:73769951|73770339
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MFLCILADVIFTLRELLRPQKGWCLRT
Nucleotide Sequence TTGTTTTTATGTATTTTAGCTGATGTAATTTTCACACTGAGAGAGTTACTGAGACCCCAGAAGGGGTGGTGTCTGAGGACTTAG
CircID chr10:73769951|73770339
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MTDTSLSFPPPKRPFAPCKISYSNPQSHQR
Nucleotide Sequence CTGACTGATACTAGCCTATCCTTTCCTCCTCCTAAGAGGCCCTTTGCTCCGTGCAAGATCTCATACTCCAACCCTCAATCGCACCAAAGGTAA
CircID chr10:73769951|73770339
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MPPRTTHKILKAKSSDTTPSGVSVTLSV
Nucleotide Sequence CTGCCCCCCCGCACCACACACAAAATTTTGAAAGCTAAGTCCTCAGACACCACCCCTTCTGGGGTCTCAGTAACTCTCTCAGTGTGA
CircID chr10:73769951|73770339
ORF Type ORF5
Protein Length 33
Nucleotide Length 102
Protein Sequence MILAYPFLLLRGPLLRARSHTPTLNRTKGKSRG
Nucleotide Sequence CTGATACTAGCCTATCCTTTCCTCCTCCTAAGAGGCCCTTTGCTCCGTGCAAGATCTCATACTCCAACCCTCAATCGCACCAAAGGTAAGAGCCGAGGGTAG
CircID chr10:73769951|73770339
ORF Type ORF6
Protein Length 27
Nucleotide Length 84
Protein Sequence MSRQKEGSKRLPRTIRQVCPPAPHTKF
Nucleotide Sequence TTGTCTAGACAAAAGGAAGGGAGCAAAAGGTTACCAAGGACCATAAGACAAGTCTGCCCCCCCGCACCACACACAAAATTTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab