CircRNA Information

General Information
circRNA Basic Information
CircID chr10:73771574|73771932
Strand +
CircType exon
Host Gene ENSG00000176986.13;
Algorism CIRI2;
Sequence GGCGCTCCAGCTGCCTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGCAAGTTGATGACCAGGCTCCCTAGGCTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCAACTCAGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAATCATTGCAGGAGAGAGCGAGCGAGCAGTGAAAGCAGAGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:73771574|73771932 hsa-miR-23a-5p 0 0 1
chr10:73771574|73771932 hsa-miR-23a-3p 0 0 1
chr10:73771574|73771932 hsa-miR-23b-5p 0 0 1
chr10:73771574|73771932 hsa-miR-23b-3p 0 0 1
chr10:73771574|73771932 hsa-miR-141-5p 0 0 1
chr10:73771574|73771932 hsa-miR-141-3p 0 0 1
chr10:73771574|73771932 hsa-miR-146a-5p 0 0 1
chr10:73771574|73771932 hsa-miR-146a-3p 0 0 1
chr10:73771574|73771932 hsa-miR-185-5p 0 0 1
chr10:73771574|73771932 hsa-miR-185-3p 0 0 1
chr10:73771574|73771932 hsa-miR-200a-5p 0 0 1
chr10:73771574|73771932 hsa-miR-200a-3p 0 0 1
chr10:73771574|73771932 hsa-miR-379-5p 0 0 1
chr10:73771574|73771932 hsa-miR-379-3p 0 0 1
chr10:73771574|73771932 hsa-miR-527 0 0 1
chr10:73771574|73771932 hsa-miR-571 0 0 1
chr10:73771574|73771932 hsa-miR-575 0 0 1
chr10:73771574|73771932 hsa-miR-634 0 0 1
chr10:73771574|73771932 hsa-miR-635 0 0 1
chr10:73771574|73771932 hsa-miR-662 0 0 1
chr10:73771574|73771932 hsa-miR-656-5p 0 0 1
chr10:73771574|73771932 hsa-miR-656-3p 0 0 1
chr10:73771574|73771932 hsa-miR-766-5p 0 0 1
chr10:73771574|73771932 hsa-miR-766-3p 0 0 1
chr10:73771574|73771932 hsa-miR-939-5p 0 0 1
chr10:73771574|73771932 hsa-miR-939-3p 0 0 1
chr10:73771574|73771932 hsa-miR-1237-5p 0 0 1
chr10:73771574|73771932 hsa-miR-1237-3p 0 0 1
chr10:73771574|73771932 hsa-miR-1243 0 0 1
chr10:73771574|73771932 hsa-miR-1248 0 0 1
chr10:73771574|73771932 hsa-miR-1321 0 0 1
chr10:73771574|73771932 hsa-miR-1827 0 0 1
chr10:73771574|73771932 hsa-miR-532-3p 0 0 1
chr10:73771574|73771932 hsa-miR-339-3p 0 0 1
chr10:73771574|73771932 hsa-miR-875-5p 0 0 1
chr10:73771574|73771932 hsa-miR-1207-3p 0 0 1
chr10:73771574|73771932 hsa-miR-483-3p 0 0 1
chr10:73771574|73771932 hsa-miR-455-3p 0 0 1
chr10:73771574|73771932 hsa-miR-146b-5p 0 0 1
chr10:73771574|73771932 hsa-miR-518a-5p 0 0 1
chr10:73771574|73771932 hsa-miR-515-5p 0 0 1
chr10:73771574|73771932 hsa-miR-516a-3p 0 0 1
chr10:73771574|73771932 hsa-miR-1254 0 0 1
chr10:73771574|73771932 hsa-miR-219-1-3p 0 0 1
chr10:73771574|73771932 hsa-miR-184 1 0 0
chr10:73771574|73771932 hsa-miR-661 1 0 0
chr10:73771574|73771932 hsa-miR-760 1 0 0
chr10:73771574|73771932 hsa-miR-1538 1 0 0
chr10:73771574|73771932 hsa-miR-2861 1 0 0
chr10:73771574|73771932 hsa-miR-3131 1 0 0
chr10:73771574|73771932 hsa-miR-3132 1 0 0
chr10:73771574|73771932 hsa-miR-3137 1 0 0
chr10:73771574|73771932 hsa-miR-3138 1 0 0
chr10:73771574|73771932 hsa-miR-4257 1 0 0
chr10:73771574|73771932 hsa-miR-4281 1 0 0
chr10:73771574|73771932 hsa-miR-4656 1 0 0
chr10:73771574|73771932 hsa-miR-4669 1 0 0
chr10:73771574|73771932 hsa-miR-4739 1 0 0
chr10:73771574|73771932 hsa-miR-8078 1 0 0
chr10:73771574|73771932 hsa-miR-8085 1 0 0
chr10:73771574|73771932 hsa-miR-6765-5p 1 0 0
chr10:73771574|73771932 hsa-miR-6825-5p 1 0 0
chr10:73771574|73771932 hsa-miR-139-3p 1 0 0
chr10:73771574|73771932 hsa-miR-7114-5p 1 0 0
chr10:73771574|73771932 hsa-miR-6089 1 0 0
chr10:73771574|73771932 hsa-miR-7154-3p 1 0 0
chr10:73771574|73771932 hsa-miR-6741-5p 1 0 0
chr10:73771574|73771932 hsa-miR-4655-5p 1 0 0
chr10:73771574|73771932 hsa-miR-197-5p 1 0 0
chr10:73771574|73771932 hsa-miR-6784-5p 1 0 0
chr10:73771574|73771932 hsa-miR-4640-5p 1 0 0
chr10:73771574|73771932 hsa-miR-6823-5p 1 0 0
chr10:73771574|73771932 hsa-miR-6749-5p 1 0 0
chr10:73771574|73771932 hsa-miR-7854-3p 1 0 0
chr10:73771574|73771932 hsa-miR-4743-5p 1 0 0
chr10:73771574|73771932 hsa-miR-149-3p 1 0 0
chr10:73771574|73771932 hsa-miR-423-5p 1 0 0
chr10:73771574|73771932 hsa-miR-6832-5p 1 0 0
chr10:73771574|73771932 hsa-miR-431-3p 1 0 0
chr10:73771574|73771932 hsa-miR-6812-5p 1 0 0
chr10:73771574|73771932 hsa-miR-6752-5p 1 0 0
chr10:73771574|73771932 hsa-miR-6754-5p 1 0 0
chr10:73771574|73771932 hsa-miR-6803-5p 1 0 0
chr10:73771574|73771932 hsa-miR-7107-5p 1 0 0
chr10:73771574|73771932 hsa-miR-7110-5p 1 0 0
chr10:73771574|73771932 hsa-miR-6780a-5p 1 0 0
chr10:73771574|73771932 hsa-miR-4728-5p 1 0 0
chr10:73771574|73771932 hsa-miR-4726-5p 1 0 0
chr10:73771574|73771932 hsa-miR-6795-5p 1 0 0
chr10:73771574|73771932 hsa-miR-6856-5p 1 0 0
chr10:73771574|73771932 hsa-miR-6855-5p 1 0 0
chr10:73771574|73771932 hsa-miR-10398-3p 1 0 0
chr10:73771574|73771932 hsa-miR-6791-5p 1 0 0
chr10:73771574|73771932 hsa-miR-7153-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:73771574|73771932
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MMTRLPRLPTEPSSVGASPAGKEAGTSTRS
Nucleotide Sequence TTGATGACCAGGCTCCCTAGGCTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAA
CircID chr10:73771574|73771932
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MQLSSPVTSDSVPLYPRSDHQSLQERASEQ
Nucleotide Sequence TTGCAACTCAGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAATCATTGCAGGAGAGAGCGAGCGAGCAGTGA
CircID chr10:73771574|73771932
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MPLPLSPTTPGLEKQCFSWELRVGCELAL
Nucleotide Sequence CTGCCTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGA
CircID chr10:73771574|73771932
ORF Type ORF4
Protein Length 54
Nucleotide Length 165
Protein Sequence MGPLQLERKLVPLPDLNIFCNSVLRSPLTVCLSIHGVIINHCRRERASSESRET
Nucleotide Sequence TTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCAACTCAGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAATCATTGCAGGAGAGAGCGAGCGAGCAGTGAAAGCAGAGAAACTTGA
CircID chr10:73771574|73771932
ORF Type ORF5
Protein Length 41
Nucleotide Length 126
Protein Sequence MVEVPASFPAGEAPTLDGSVGSLGSLVINLQYLTEPVHIPL
Nucleotide Sequence CTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAGCCTAGGGAGCCTGGTCATCAACTTGCAATACCTCACAGAGCCAGTTCACATCCCACTCTGA
CircID chr10:73771574|73771932
ORF Type ORF6
Protein Length 91
Nucleotide Length 273
Protein Sequence MMITPWIERHTVRGDRRTELQNILRSGRGTSFLSSWRGPNTGWFCREPREPGHQLAIPHRASSHPTLSSHEKHCFSRPGVVGERGRGSWSA
Nucleotide Sequence TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACTGAGTTGCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAGCCTAGGGAGCCTGGTCATCAACTTGCAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAGGCAGCTGGAGCGCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab