CircRNA Information

General Information
circRNA Basic Information
CircID chr10:73793900|73794276
Strand -
CircType exon
Host Gene ENSG00000214655.9;
Algorism CIRI2;
Sequence CTGGGTGGCTACCAACACCCTGAGCAAGGCGGCCTTCCTGTTGACAGTGCTAAGTGAGCGTCCAGAGCACCACAACCTGGCCTTCCGAGTTGGCATGTTTGCCTTGGAGCTACAGAGGCCTCCAGCTTCTACCAAGGCCTTGGAGGTCAGAGGCTCCATCTCAGCCTTGTATTTCAGTCTCTTTAGAGCCTTGCACCTTGATCTCTATTGACACACCAGAGGTCTGAGCTCCTTCCTGTGCCCTCAGGTGAAGCTGGCATACCAGGAGTCTGAGGTGGCTGCCCTGCTCAAGAAGATCCCTCTGGGTCCAAGTGAGATGAGTACCATGCGGTGCCGGGCAGAGGAACTTCGGGAGGGGACACTCTGTGACTATCGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:73793900|73794276 hsa-miR-18a-5p 0 0 1
chr10:73793900|73794276 hsa-miR-18a-3p 0 0 1
chr10:73793900|73794276 hsa-miR-143-5p 0 0 1
chr10:73793900|73794276 hsa-miR-143-3p 0 0 1
chr10:73793900|73794276 hsa-miR-379-5p 0 0 1
chr10:73793900|73794276 hsa-miR-379-3p 0 0 1
chr10:73793900|73794276 hsa-miR-381-5p 0 0 1
chr10:73793900|73794276 hsa-miR-381-3p 0 0 1
chr10:73793900|73794276 hsa-miR-422a 0 0 1
chr10:73793900|73794276 hsa-miR-18b-5p 0 0 1
chr10:73793900|73794276 hsa-miR-18b-3p 0 0 1
chr10:73793900|73794276 hsa-miR-412-5p 0 0 1
chr10:73793900|73794276 hsa-miR-412-3p 0 0 1
chr10:73793900|73794276 hsa-miR-526b-5p 0 0 1
chr10:73793900|73794276 hsa-miR-526b-3p 0 0 1
chr10:73793900|73794276 hsa-miR-505-5p 0 0 1
chr10:73793900|73794276 hsa-miR-505-3p 0 0 1
chr10:73793900|73794276 hsa-miR-583 0 0 1
chr10:73793900|73794276 hsa-miR-592 0 0 1
chr10:73793900|73794276 hsa-miR-597-5p 0 0 1
chr10:73793900|73794276 hsa-miR-597-3p 0 0 1
chr10:73793900|73794276 hsa-miR-609 0 0 1
chr10:73793900|73794276 hsa-miR-624-5p 0 0 1
chr10:73793900|73794276 hsa-miR-624-3p 0 0 1
chr10:73793900|73794276 hsa-miR-650 0 0 1
chr10:73793900|73794276 hsa-miR-421 0 0 1
chr10:73793900|73794276 hsa-miR-300 0 0 1
chr10:73793900|73794276 hsa-miR-890 0 0 1
chr10:73793900|73794276 hsa-miR-708-5p 0 0 1
chr10:73793900|73794276 hsa-miR-708-3p 0 0 1
chr10:73793900|73794276 hsa-miR-1178-5p 0 0 1
chr10:73793900|73794276 hsa-miR-1178-3p 0 0 1
chr10:73793900|73794276 hsa-miR-1202 1 1 1
chr10:73793900|73794276 hsa-miR-1266-5p 0 0 1
chr10:73793900|73794276 hsa-miR-1266-3p 0 0 1
chr10:73793900|73794276 hsa-miR-1276 0 0 1
chr10:73793900|73794276 hsa-miR-28-5p 0 1 1
chr10:73793900|73794276 hsa-miR-324-3p 0 0 1
chr10:73793900|73794276 hsa-miR-574-3p 0 0 1
chr10:73793900|73794276 hsa-miR-378 0 0 1
chr10:73793900|73794276 hsa-miR-612 1 0 0
chr10:73793900|73794276 hsa-miR-637 1 1 0
chr10:73793900|73794276 hsa-miR-638 1 0 0
chr10:73793900|73794276 hsa-miR-1295a 1 0 0
chr10:73793900|73794276 hsa-miR-711 0 1 0
chr10:73793900|73794276 hsa-miR-3132 1 0 0
chr10:73793900|73794276 hsa-miR-3137 0 1 0
chr10:73793900|73794276 hsa-miR-3139 0 1 0
chr10:73793900|73794276 hsa-miR-3197 1 0 0
chr10:73793900|73794276 hsa-miR-4326 0 1 0
chr10:73793900|73794276 hsa-miR-3650 1 1 0
chr10:73793900|73794276 hsa-miR-3907 1 1 0
chr10:73793900|73794276 hsa-miR-3929 0 1 0
chr10:73793900|73794276 hsa-miR-3945 1 1 0
chr10:73793900|73794276 hsa-miR-4428 1 0 0
chr10:73793900|73794276 hsa-miR-4463 1 0 0
chr10:73793900|73794276 hsa-miR-4470 0 1 0
chr10:73793900|73794276 hsa-miR-4476 0 1 0
chr10:73793900|73794276 hsa-miR-4478 0 1 0
chr10:73793900|73794276 hsa-miR-4496 1 0 0
chr10:73793900|73794276 hsa-miR-4504 0 1 0
chr10:73793900|73794276 hsa-miR-4513 1 0 0
chr10:73793900|73794276 hsa-miR-4518 0 1 0
chr10:73793900|73794276 hsa-miR-4526 1 0 0
chr10:73793900|73794276 hsa-miR-4533 1 1 0
chr10:73793900|73794276 hsa-miR-3972 0 1 0
chr10:73793900|73794276 hsa-miR-4741 1 0 0
chr10:73793900|73794276 hsa-miR-6132 1 0 0
chr10:73793900|73794276 hsa-miR-8052 1 0 0
chr10:73793900|73794276 hsa-miR-8077 1 0 0
chr10:73793900|73794276 hsa-miR-8089 1 0 0
chr10:73793900|73794276 hsa-miR-9901 1 0 0
chr10:73793900|73794276 hsa-miR-1843 0 1 0
chr10:73793900|73794276 hsa-miR-12119 1 0 0
chr10:73793900|73794276 hsa-miR-12122 0 1 0
chr10:73793900|73794276 hsa-miR-127-5p 0 1 0
chr10:73793900|73794276 hsa-miR-3194-3p 1 0 0
chr10:73793900|73794276 hsa-miR-192-3p 0 1 0
chr10:73793900|73794276 hsa-miR-3622a-5p 1 0 0
chr10:73793900|73794276 hsa-miR-6089 1 0 0
chr10:73793900|73794276 hsa-miR-769-5p 0 1 0
chr10:73793900|73794276 hsa-miR-4755-3p 1 1 0
chr10:73793900|73794276 hsa-miR-6768-5p 1 0 0
chr10:73793900|73794276 hsa-miR-2467-5p 1 0 0
chr10:73793900|73794276 hsa-miR-3194-5p 1 0 0
chr10:73793900|73794276 hsa-miR-5088-5p 1 0 0
chr10:73793900|73794276 hsa-miR-1226-5p 1 1 0
chr10:73793900|73794276 hsa-miR-1908-3p 1 0 0
chr10:73793900|73794276 hsa-miR-7161-3p 0 1 0
chr10:73793900|73794276 hsa-miR-4650-3p 0 1 0
chr10:73793900|73794276 hsa-miR-3614-5p 1 1 0
chr10:73793900|73794276 hsa-miR-4638-3p 1 0 0
chr10:73793900|73794276 hsa-miR-7156-3p 1 0 0
chr10:73793900|73794276 hsa-miR-4740-5p 1 0 0
chr10:73793900|73794276 hsa-miR-6866-5p 1 1 0
chr10:73793900|73794276 hsa-miR-7112-5p 1 0 0
chr10:73793900|73794276 hsa-miR-4708-3p 1 0 0
chr10:73793900|73794276 hsa-miR-525-5p 0 1 0
chr10:73793900|73794276 hsa-miR-873-3p 1 0 0
chr10:73793900|73794276 hsa-miR-6887-3p 0 1 0
chr10:73793900|73794276 hsa-miR-6826-3p 0 1 0
chr10:73793900|73794276 hsa-miR-518c-5p 0 1 0
chr10:73793900|73794276 hsa-miR-1285-5p 0 1 0
chr10:73793900|73794276 hsa-miR-4797-5p 0 1 0
chr10:73793900|73794276 hsa-miR-4763-3p 1 0 0
chr10:73793900|73794276 hsa-miR-6754-5p 0 1 0
chr10:73793900|73794276 hsa-miR-6813-5p 0 1 0
chr10:73793900|73794276 hsa-miR-6722-3p 1 0 0
chr10:73793900|73794276 hsa-miR-6774-5p 0 1 0
chr10:73793900|73794276 hsa-miR-6836-5p 1 1 0
chr10:73793900|73794276 hsa-miR-328-5p 1 0 0
chr10:73793900|73794276 hsa-miR-4649-5p 1 0 0
chr10:73793900|73794276 hsa-miR-4685-5p 1 0 0
chr10:73793900|73794276 hsa-miR-6735-5p 1 1 0
chr10:73793900|73794276 hsa-miR-6795-5p 1 0 0
chr10:73793900|73794276 hsa-miR-6887-5p 1 0 0
chr10:73793900|73794276 hsa-miR-6511a-5p 1 0 0
chr10:73793900|73794276 hsa-miR-3085-5p 0 1 0
chr10:73793900|73794276 hsa-miR-7843-5p 1 1 0
chr10:73793900|73794276 hsa-miR-6877-3p 0 1 0
chr10:73793900|73794276 hsa-miR-4747-5p 0 1 0
chr10:73793900|73794276 hsa-miR-6876-5p 0 1 0
chr10:73793900|73794276 hsa-miR-520a-5p 0 1 0
chr10:73793900|73794276 hsa-miR-4757-5p 0 1 0
chr10:73793900|73794276 hsa-miR-6529-5p 0 1 0
chr10:73793900|73794276 hsa-miR-3059-5p 0 1 0
chr10:73793900|73794276 hsa-miR-6819-3p 0 1 0
chr10:73793900|73794276 hsa-miR-6823-3p 0 1 0
chr10:73793900|73794276 hsa-miR-4756-5p 1 1 0
chr10:73793900|73794276 hsa-miR-6884-5p 1 0 0
chr10:73793900|73794276 hsa-miR-3136-5p 1 0 0
chr10:73793900|73794276 hsa-miR-4659b-3p 0 1 0
chr10:73793900|73794276 hsa-miR-6502-5p 0 1 0
chr10:73793900|73794276 hsa-miR-5579-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:73793900|73794276
ORF Type ORF1
Protein Length 63
Nucleotide Length 192
Protein Sequence MSKAAFLLTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVRGSISALYFSLFRALHLDLY
Nucleotide Sequence CTGAGCAAGGCGGCCTTCCTGTTGACAGTGCTAAGTGAGCGTCCAGAGCACCACAACCTGGCCTTCCGAGTTGGCATGTTTGCCTTGGAGCTACAGAGGCCTCCAGCTTCTACCAAGGCCTTGGAGGTCAGAGGCTCCATCTCAGCCTTGTATTTCAGTCTCTTTAGAGCCTTGCACCTTGATCTCTATTGA
CircID chr10:73793900|73794276
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MSSFLCPQVKLAYQESEVAALLKKIPLGPSEMSTMRCRAEELREGTLCDYR
Nucleotide Sequence CTGAGCTCCTTCCTGTGCCCTCAGGTGAAGCTGGCATACCAGGAGTCTGAGGTGGCTGCCCTGCTCAAGAAGATCCCTCTGGGTCCAAGTGAGATGAGTACCATGCGGTGCCGGGCAGAGGAACTTCGGGAGGGGACACTCTGTGACTATCGG
CircID chr10:73793900|73794276
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MACLPWSYRGLQLLPRPWRSEAPSQPCISVSLEPCTLISIDTPEV
Nucleotide Sequence TTGGCATGTTTGCCTTGGAGCTACAGAGGCCTCCAGCTTCTACCAAGGCCTTGGAGGTCAGAGGCTCCATCTCAGCCTTGTATTTCAGTCTCTTTAGAGCCTTGCACCTTGATCTCTATTGACACACCAGAGGTCTGA
CircID chr10:73793900|73794276
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MPASPEGTGRSSDLWCVNRDQGARL
Nucleotide Sequence ATGCCAGCTTCACCTGAGGGCACAGGAAGGAGCTCAGACCTCTGGTGTGTCAATAGAGATCAAGGTGCAAGGCTCTAA
CircID chr10:73793900|73794276
ORF Type ORF5
Protein Length 38
Nucleotide Length 117
Protein Sequence MEASVAPRQTCQLGRPGCGALDAHLALSTGRPPCSGCW
Nucleotide Sequence CTGGAGGCCTCTGTAGCTCCAAGGCAAACATGCCAACTCGGAAGGCCAGGTTGTGGTGCTCTGGACGCTCACTTAGCACTGTCAACAGGAAGGCCGCCTTGCTCAGGGTGTTGGTAG
CircID chr10:73793900|73794276
ORF Type ORF6
Protein Length 34
Nucleotide Length 105
Protein Sequence MVCQLHLRAQEGAQTSGVSIEIKVQGSKETEIQG
Nucleotide Sequence CTGGTATGCCAGCTTCACCTGAGGGCACAGGAAGGAGCTCAGACCTCTGGTGTGTCAATAGAGATCAAGGTGCAAGGCTCTAAAGAGACTGAAATACAAGGCTGA
CircID chr10:73793900|73794276
ORF Type ORF7
Protein Length 27
Nucleotide Length 84
Protein Sequence MVLISLGPRGIFLSRAATSDSWYASFT
Nucleotide Sequence ATGGTACTCATCTCACTTGGACCCAGAGGGATCTTCTTGAGCAGGGCAGCCACCTCAGACTCCTGGTATGCCAGCTTCACCTGA
CircID chr10:73793900|73794276
ORF Type ORF8
Protein Length 59
Nucleotide Length 177
Protein Sequence MKYKAEMEPLTSKALVEAGGLCSSKANMPTRKARLWCSGRSLSTVNRKAALLRVLVATQ
Nucleotide Sequence CTGAAATACAAGGCTGAGATGGAGCCTCTGACCTCCAAGGCCTTGGTAGAAGCTGGAGGCCTCTGTAGCTCCAAGGCAAACATGCCAACTCGGAAGGCCAGGTTGTGGTGCTCTGGACGCTCACTTAGCACTGTCAACAGGAAGGCCGCCTTGCTCAGGGTGTTGGTAGCCACCCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab