CircRNA Information

General Information
circRNA Basic Information
CircID chr10:75179907|75180107
Strand +
CircType exon
Host Gene ENSG00000156671.11;
Algorism CIRI2;
Sequence CTGCCTCCTTCAAAACCTCTTACTCTCTACCACTCTTCAATTACCCTTCAATAACACTACCCTACCTGGTCTTTAAAAAAAAAAAAGGAAAAGAAAAAAAAAGGCAACACTGCTGCCAGGAACACAGAAAATGCATTGAAGACTTGTAACATAACCTCCAGTTTGCATCCCCAAACCAAAAACCTTTTGGTTCCTTCCTTA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:75179907|75180107 hsa-miR-154-5p 0 0 1
chr10:75179907|75180107 hsa-miR-154-3p 0 0 1
chr10:75179907|75180107 hsa-miR-379-5p 0 0 1
chr10:75179907|75180107 hsa-miR-379-3p 0 0 1
chr10:75179907|75180107 hsa-miR-586 0 0 1
chr10:75179907|75180107 hsa-miR-650 0 0 1
chr10:75179907|75180107 hsa-miR-659-5p 0 0 1
chr10:75179907|75180107 hsa-miR-659-3p 0 0 1
chr10:75179907|75180107 hsa-miR-1264 0 0 1
chr10:75179907|75180107 hsa-miR-1252-5p 0 0 1
chr10:75179907|75180107 hsa-miR-1252-3p 0 0 1
chr10:75179907|75180107 hsa-miR-1827 0 0 1
chr10:75179907|75180107 hsa-miR-885-3p 0 0 1
chr10:75179907|75180107 hsa-miR-142-3p 0 0 1
chr10:75179907|75180107 hsa-miR-1293 1 0 0
chr10:75179907|75180107 hsa-miR-3132 1 0 0
chr10:75179907|75180107 hsa-miR-3138 1 0 0
chr10:75179907|75180107 hsa-miR-4306 1 0 0
chr10:75179907|75180107 hsa-miR-4270 1 0 0
chr10:75179907|75180107 hsa-miR-4451 1 0 0
chr10:75179907|75180107 hsa-miR-4483 1 0 0
chr10:75179907|75180107 hsa-miR-4510 1 0 0
chr10:75179907|75180107 hsa-miR-4525 1 0 0
chr10:75179907|75180107 hsa-miR-4689 1 0 0
chr10:75179907|75180107 hsa-miR-4739 1 0 0
chr10:75179907|75180107 hsa-miR-5192 1 0 0
chr10:75179907|75180107 hsa-miR-5194 1 0 0
chr10:75179907|75180107 hsa-miR-6127 1 0 0
chr10:75179907|75180107 hsa-miR-6165 1 0 0
chr10:75179907|75180107 hsa-miR-6745 1 0 0
chr10:75179907|75180107 hsa-miR-7150 1 0 0
chr10:75179907|75180107 hsa-miR-8073 1 0 0
chr10:75179907|75180107 hsa-miR-8085 1 0 0
chr10:75179907|75180107 hsa-miR-1843 1 0 0
chr10:75179907|75180107 hsa-miR-12114 1 0 0
chr10:75179907|75180107 hsa-miR-4433b-3p 1 0 0
chr10:75179907|75180107 hsa-miR-6734-5p 1 0 0
chr10:75179907|75180107 hsa-miR-4433a-3p 1 0 0
chr10:75179907|75180107 hsa-miR-3150a-3p 1 0 0
chr10:75179907|75180107 hsa-miR-1236-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6515-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6880-5p 1 0 0
chr10:75179907|75180107 hsa-miR-7847-3p 1 0 0
chr10:75179907|75180107 hsa-miR-4709-3p 1 0 0
chr10:75179907|75180107 hsa-miR-4722-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6730-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6890-5p 1 0 0
chr10:75179907|75180107 hsa-miR-197-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6796-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6732-5p 1 0 0
chr10:75179907|75180107 hsa-miR-1224-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6760-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6881-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6782-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6786-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6835-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6740-5p 1 0 0
chr10:75179907|75180107 hsa-miR-185-5p 1 0 0
chr10:75179907|75180107 hsa-miR-4732-5p 1 0 0
chr10:75179907|75180107 hsa-miR-3202 1 0 0
chr10:75179907|75180107 hsa-miR-149-3p 1 0 0
chr10:75179907|75180107 hsa-miR-6824-5p 1 0 0
chr10:75179907|75180107 hsa-miR-3162-5p 1 0 0
chr10:75179907|75180107 hsa-miR-423-5p 1 0 0
chr10:75179907|75180107 hsa-miR-4699-5p 1 0 0
chr10:75179907|75180107 hsa-miR-1207-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6870-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6752-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6754-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6756-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6769a-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6803-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6851-5p 1 0 0
chr10:75179907|75180107 hsa-miR-7110-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6751-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6763-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6780a-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6797-5p 1 0 0
chr10:75179907|75180107 hsa-miR-4701-3p 1 0 0
chr10:75179907|75180107 hsa-miR-4745-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6738-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6858-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6883-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6831-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6758-5p 1 0 0
chr10:75179907|75180107 hsa-miR-1914-3p 1 0 0
chr10:75179907|75180107 hsa-miR-4700-5p 1 0 0
chr10:75179907|75180107 hsa-miR-6718-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:75179907|75180107
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MVFKKKKGKEKKRQHCCQEHRKCIEDL
Nucleotide Sequence CTGGTCTTTAAAAAAAAAAAAGGAAAAGAAAAAAAAAGGCAACACTGCTGCCAGGAACACAGAAAATGCATTGAAGACTTGTAA
CircID chr10:75179907|75180107
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MGMQTGGYVTSLQCIFCVPGSSVAFFFLFLFFF
Nucleotide Sequence TTGGGGATGCAAACTGGAGGTTATGTTACAAGTCTTCAATGCATTTTCTGTGTTCCTGGCAGCAGTGTTGCCTTTTTTTTTCTTTTCCTTTTTTTTTTTTAA
CircID chr10:75179907|75180107
ORF Type ORF3
Protein Length 40
Nucleotide Length 123
Protein Sequence MVWGCKLEVMLQVFNAFSVFLAAVLPFFFFSFFFFKDQVG
Nucleotide Sequence TTGGTTTGGGGATGCAAACTGGAGGTTATGTTACAAGTCTTCAATGCATTTTCTGTGTTCCTGGCAGCAGTGTTGCCTTTTTTTTTCTTTTCCTTTTTTTTTTTTAAAGACCAGGTAGGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab