CircRNA Information

General Information
circRNA Basic Information
CircID chr10:75444072|75444335
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGTTTATGCTGGAAAGGAGGGTAGTTATGAACTTATAAGTTCTGGACTTTTGTTTGAAGTTACTGTATGTATTTTTTTTCTTCTCATTATACGTCAGAGTCTTCTTTCCTGCATTAACTATGGCAAATCCACTTCTGTGTTAGTTGGATTGTCCAACAGTAAACTGGTGACCTCTCCATGTAGAAGGTCATGGATTTCAGGCTGTATTGTTTTTGTGACTCTTTTCTGGGGGAGAATTAAAGTTACTGGAGCCAGTGTGTACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:75444072|75444335 hsa-miR-198 0 0 1
chr10:75444072|75444335 hsa-miR-144-5p 0 0 1
chr10:75444072|75444335 hsa-miR-144-3p 0 0 1
chr10:75444072|75444335 hsa-miR-149-5p 0 0 1
chr10:75444072|75444335 hsa-miR-149-3p 0 0 1
chr10:75444072|75444335 hsa-miR-185-5p 0 0 1
chr10:75444072|75444335 hsa-miR-185-3p 0 0 1
chr10:75444072|75444335 hsa-miR-155-5p 0 0 1
chr10:75444072|75444335 hsa-miR-155-3p 0 0 1
chr10:75444072|75444335 hsa-miR-452-5p 0 0 1
chr10:75444072|75444335 hsa-miR-452-3p 0 0 1
chr10:75444072|75444335 hsa-miR-569 0 0 1
chr10:75444072|75444335 hsa-miR-603 0 0 1
chr10:75444072|75444335 hsa-miR-606 0 0 1
chr10:75444072|75444335 hsa-miR-892b 0 1 1
chr10:75444072|75444335 hsa-miR-1226-5p 0 0 1
chr10:75444072|75444335 hsa-miR-1226-3p 0 0 1
chr10:75444072|75444335 hsa-miR-1286 0 0 1
chr10:75444072|75444335 hsa-miR-1290 0 0 1
chr10:75444072|75444335 hsa-miR-1253 0 0 1
chr10:75444072|75444335 hsa-miR-770-5p 0 0 1
chr10:75444072|75444335 hsa-miR-361-3p 0 1 1
chr10:75444072|75444335 hsa-miR-338-3p 0 0 1
chr10:75444072|75444335 hsa-miR-876-5p 0 0 1
chr10:75444072|75444335 hsa-miR-362-3p 0 0 1
chr10:75444072|75444335 hsa-miR-1300 0 0 1
chr10:75444072|75444335 hsa-miR-329 0 0 1
chr10:75444072|75444335 hsa-miR-101 0 0 1
chr10:75444072|75444335 hsa-miR-4290 1 0 0
chr10:75444072|75444335 hsa-miR-7703 1 0 0
chr10:75444072|75444335 hsa-miR-6757-3p 1 0 0
chr10:75444072|75444335 hsa-miR-3925-3p 0 1 0
chr10:75444072|75444335 hsa-miR-1178-3p 1 0 0
chr10:75444072|75444335 hsa-miR-4520-2-3p 0 1 0
chr10:75444072|75444335 hsa-miR-6791-3p 1 0 0
chr10:75444072|75444335 hsa-miR-4724-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr10:75444072|75444335
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MDFCLKLLYVFFFFSLYVRVFFPALTMANPLLC
Nucleotide Sequence CTGGACTTTTGTTTGAAGTTACTGTATGTATTTTTTTTCTTCTCATTATACGTCAGAGTCTTCTTTCCTGCATTAACTATGGCAAATCCACTTCTGTGTTAG

CircID chr10:75444072|75444335
ORF Type ORF2
Protein Length 71
Nucleotide Length 213
Protein Sequence MFEVTVCIFFLLIIRQSLLSCINYGKSTSVLVGLSNSKLVTSPCRRSWISGCIVFVTLFWGRIKVTGASVY
Nucleotide Sequence TTGTTTGAAGTTACTGTATGTATTTTTTTTCTTCTCATTATACGTCAGAGTCTTCTTTCCTGCATTAACTATGGCAAATCCACTTCTGTGTTAGTTGGATTGTCCAACAGTAAACTGGTGACCTCTCCATGTAGAAGGTCATGGATTTCAGGCTGTATTGTTTTTGTGACTCTTTTCTGGGGGAGAATTAAAGTTACTGGAGCCAGTGTGTAC

CircID chr10:75444072|75444335
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MKSMTFYMERSPVYCWTIQLTQKWICHS
Nucleotide Sequence CTGAAATCCATGACCTTCTACATGGAGAGGTCACCAGTTTACTGTTGGACAATCCAACTAACACAGAAGTGGATTTGCCATAGTTAA

CircID chr10:75444072|75444335
ORF Type ORF4
Protein Length 32
Nucleotide Length 96
Protein Sequence MTYNEKKKNTYSNFKQKSRTYKFITTLLSSIN
Nucleotide Sequence CTGACGTATAATGAGAAGAAAAAAAATACATACAGTAACTTCAAACAAAAGTCCAGAACTTATAAGTTCATAACTACCCTCCTTTCCAGCATAAAC

CircID chr10:75444072|75444335
ORF Type ORF5
Protein Length 45
Nucleotide Length 138
Protein Sequence MAPVTLILPQKRVTKTIQPEIHDLLHGEVTSLLLDNPTNTEVDLP
Nucleotide Sequence CTGGCTCCAGTAACTTTAATTCTCCCCCAGAAAAGAGTCACAAAAACAATACAGCCTGAAATCCATGACCTTCTACATGGAGAGGTCACCAGTTTACTGTTGGACAATCCAACTAACACAGAAGTGGATTTGCCATAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites