CircRNA Information

General Information
circRNA Basic Information
CircID chr10:79315088|79315291
Strand +
CircType exon
Host Gene ENSG00000108175.15;
Algorism CIRI2;
Sequence CTCCCTCACACCCTGGCCTGGCTCCCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGGGCCGAGCTTGCTGGTGGAGGCTTGCTGGAGAGGGGACCCAGGAAACCCGCCTCAGGTGCTGAGCCCAGAGATGGTTGCAGGAGGTGCCCGGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:79315088|79315291 hsa-miR-204-5p 0 0 1
chr10:79315088|79315291 hsa-miR-204-3p 0 0 1
chr10:79315088|79315291 hsa-miR-211-5p 0 0 1
chr10:79315088|79315291 hsa-miR-211-3p 0 0 1
chr10:79315088|79315291 hsa-miR-149-5p 0 0 1
chr10:79315088|79315291 hsa-miR-149-3p 0 0 1
chr10:79315088|79315291 hsa-miR-326 0 1 1
chr10:79315088|79315291 hsa-miR-596 0 0 1
chr10:79315088|79315291 hsa-miR-612 1 0 1
chr10:79315088|79315291 hsa-miR-622 0 0 1
chr10:79315088|79315291 hsa-miR-623 0 0 1
chr10:79315088|79315291 hsa-miR-634 0 0 1
chr10:79315088|79315291 hsa-miR-766-5p 0 0 1
chr10:79315088|79315291 hsa-miR-766-3p 0 0 1
chr10:79315088|79315291 hsa-miR-760 0 1 1
chr10:79315088|79315291 hsa-miR-920 0 0 1
chr10:79315088|79315291 hsa-miR-1180-5p 0 0 1
chr10:79315088|79315291 hsa-miR-1180-3p 0 0 1
chr10:79315088|79315291 hsa-miR-1226-5p 0 0 1
chr10:79315088|79315291 hsa-miR-1226-3p 0 0 1
chr10:79315088|79315291 hsa-miR-1236-5p 0 0 1
chr10:79315088|79315291 hsa-miR-1236-3p 0 0 1
chr10:79315088|79315291 hsa-miR-1203 0 0 1
chr10:79315088|79315291 hsa-miR-1294 0 0 1
chr10:79315088|79315291 hsa-miR-338-3p 0 0 1
chr10:79315088|79315291 hsa-miR-330-5p 0 1 1
chr10:79315088|79315291 hsa-miR-1285 0 0 1
chr10:79315088|79315291 hsa-miR-516b 0 0 1
chr10:79315088|79315291 hsa-miR-24 0 0 1
chr10:79315088|79315291 hsa-miR-661 1 0 0
chr10:79315088|79315291 hsa-miR-1976 0 1 0
chr10:79315088|79315291 hsa-miR-4322 1 0 0
chr10:79315088|79315291 hsa-miR-378g 0 1 0
chr10:79315088|79315291 hsa-miR-4674 0 1 0
chr10:79315088|79315291 hsa-miR-4734 1 0 0
chr10:79315088|79315291 hsa-miR-4767 1 0 0
chr10:79315088|79315291 hsa-miR-6090 1 0 0
chr10:79315088|79315291 hsa-miR-8089 1 0 0
chr10:79315088|79315291 hsa-miR-17-3p 0 1 0
chr10:79315088|79315291 hsa-miR-6765-5p 0 1 0
chr10:79315088|79315291 hsa-miR-6861-5p 1 0 0
chr10:79315088|79315291 hsa-miR-1972 0 1 0
chr10:79315088|79315291 hsa-miR-6892-3p 0 1 0
chr10:79315088|79315291 hsa-miR-505-5p 0 1 0
chr10:79315088|79315291 hsa-miR-6727-5p 1 0 0
chr10:79315088|79315291 hsa-miR-6787-3p 1 0 0
chr10:79315088|79315291 hsa-miR-6827-5p 0 1 0
chr10:79315088|79315291 hsa-miR-6821-5p 0 1 0
chr10:79315088|79315291 hsa-miR-1343-3p 1 1 0
chr10:79315088|79315291 hsa-miR-615-5p 1 0 0
chr10:79315088|79315291 hsa-miR-939-3p 1 0 0
chr10:79315088|79315291 hsa-miR-3191-5p 0 1 0
chr10:79315088|79315291 hsa-miR-4638-3p 1 0 0
chr10:79315088|79315291 hsa-miR-6742-3p 1 1 0
chr10:79315088|79315291 hsa-miR-1306-5p 0 1 0
chr10:79315088|79315291 hsa-miR-516b-5p 0 1 0
chr10:79315088|79315291 hsa-miR-7112-5p 1 0 0
chr10:79315088|79315291 hsa-miR-4707-5p 1 0 0
chr10:79315088|79315291 hsa-miR-660-3p 0 1 0
chr10:79315088|79315291 hsa-miR-3158-3p 0 1 0
chr10:79315088|79315291 hsa-miR-4772-3p 0 1 0
chr10:79315088|79315291 hsa-miR-6826-3p 0 1 0
chr10:79315088|79315291 hsa-miR-518c-5p 1 1 0
chr10:79315088|79315291 hsa-miR-5587-3p 1 1 0
chr10:79315088|79315291 hsa-miR-1233-5p 0 1 0
chr10:79315088|79315291 hsa-miR-6816-5p 1 0 0
chr10:79315088|79315291 hsa-miR-4755-5p 0 1 0
chr10:79315088|79315291 hsa-miR-328-5p 1 0 0
chr10:79315088|79315291 hsa-miR-10396a-3p 0 1 0
chr10:79315088|79315291 hsa-miR-10396b-3p 0 1 0
chr10:79315088|79315291 hsa-miR-10398-3p 0 1 0
chr10:79315088|79315291 hsa-miR-5591-5p 1 1 0
chr10:79315088|79315291 hsa-miR-6791-5p 1 0 0
chr10:79315088|79315291 hsa-miR-10400-3p 1 1 0
chr10:79315088|79315291 hsa-miR-4723-3p 1 1 0
chr10:79315088|79315291 hsa-miR-6783-3p 1 1 0
chr10:79315088|79315291 hsa-miR-5006-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr10:79315088|79315291
ORF Type ORF1
Protein Length 64
Nucleotide Length 192
Protein Sequence MAWLPEHSGRACLQTAGCRHHARFRASRKGSSGPSLLVEACWRGDPGNPPQVLSPEMVAGGARG
Nucleotide Sequence CTGGCCTGGCTCCCAGAGCACTCCGGAAGAGCTTGTCTCCAGACTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGGGCCGAGCTTGCTGGTGGAGGCTTGCTGGAGAGGGGACCCAGGAAACCCGCCTCAGGTGCTGAGCCCAGAGATGGTTGCAGGAGGTGCCCGGGGC

CircID chr10:79315088|79315291
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MQAVGTTHGSEPAGREALGRACWWRLAGEGTQETRLRC
Nucleotide Sequence CTGCAGGCTGTAGGCACCACGCACGGTTCAGAGCCAGCCGGAAGGGAAGCTCTGGGCCGAGCTTGCTGGTGGAGGCTTGCTGGAGAGGGGACCCAGGAAACCCGCCTCAGGTGCTGA

CircID chr10:79315088|79315291
ORF Type ORF3
Protein Length 55
Nucleotide Length 165
Protein Sequence MRRVSWVPSPASLHQQARPRASLPAGSEPCVVPTACSLETSSSGVLWEPGQGVRE
Nucleotide Sequence CTGAGGCGGGTTTCCTGGGTCCCCTCTCCAGCAAGCCTCCACCAGCAAGCTCGGCCCAGAGCTTCCCTTCCGGCTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGGGAGCCAGGCCAGGGTGTGAGGGAG

CircID chr10:79315088|79315291
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MALNRAWCLQPAVWRQALPECSGSQARV
Nucleotide Sequence CTGGCTCTGAACCGTGCGTGGTGCCTACAGCCTGCAGTCTGGAGACAAGCTCTTCCGGAGTGCTCTGGGAGCCAGGCCAGGGTGTGA

CircID chr10:79315088|79315291
ORF Type ORF5
Protein Length 35
Nucleotide Length 108
Protein Sequence MQPSLGSAPEAGFLGPLSSKPPPASSAQSFPSGWL
Nucleotide Sequence CTGCAACCATCTCTGGGCTCAGCACCTGAGGCGGGTTTCCTGGGTCCCCTCTCCAGCAAGCCTCCACCAGCAAGCTCGGCCCAGAGCTTCCCTTCCGGCTGGCTCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites