CircRNA Information

General Information
circRNA Basic Information
CircID chr10:79556318|79556508
Strand -
CircType exon
Host Gene ENSG00000185303.14;
Algorism CIRI2;
Sequence CCCAAGACACATCCTAAGACCTGGCACATGTTAATTTTAATGATTATCTGGGTGAATGTATTAATAAAAGGGGAAAGTGGAGCCGGTGGCATGGGGGGTGGTGTGAATGCCCACCGAGGTCTGAAGTGGGGTGCAGATTTGTTCATCAGCAGAAAGTTACTCGGGTCATGTCTGCAGTGGGGGGCTCTTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:79556318|79556508 hsa-miR-181c-5p 0 0 1
chr10:79556318|79556508 hsa-miR-181c-3p 0 0 1
chr10:79556318|79556508 hsa-miR-377-5p 0 0 1
chr10:79556318|79556508 hsa-miR-377-3p 0 0 1
chr10:79556318|79556508 hsa-miR-431-5p 0 0 1
chr10:79556318|79556508 hsa-miR-431-3p 0 0 1
chr10:79556318|79556508 hsa-miR-181d-5p 0 0 1
chr10:79556318|79556508 hsa-miR-181d-3p 0 0 1
chr10:79556318|79556508 hsa-miR-635 0 0 1
chr10:79556318|79556508 hsa-miR-651-5p 0 0 1
chr10:79556318|79556508 hsa-miR-651-3p 0 0 1
chr10:79556318|79556508 hsa-miR-655-5p 0 0 1
chr10:79556318|79556508 hsa-miR-655-3p 0 0 1
chr10:79556318|79556508 hsa-miR-541-5p 0 0 1
chr10:79556318|79556508 hsa-miR-541-3p 0 0 1
chr10:79556318|79556508 hsa-miR-1227-5p 0 0 1
chr10:79556318|79556508 hsa-miR-1227-3p 0 0 1
chr10:79556318|79556508 hsa-miR-1228-5p 0 0 1
chr10:79556318|79556508 hsa-miR-1228-3p 0 0 1
chr10:79556318|79556508 hsa-miR-1265 0 0 1
chr10:79556318|79556508 hsa-miR-1225-3p 0 0 1
chr10:79556318|79556508 hsa-miR-654-5p 0 0 1
chr10:79556318|79556508 hsa-miR-455-5p 0 0 1
chr10:79556318|79556508 hsa-miR-509-3-5p 0 1 1
chr10:79556318|79556508 hsa-miR-509-5p 0 1 1
chr10:79556318|79556508 hsa-miR-220b 0 0 1
chr10:79556318|79556508 hsa-miR-181a 0 0 1
chr10:79556318|79556508 hsa-miR-181b 0 0 1
chr10:79556318|79556508 hsa-miR-544 0 0 1
chr10:79556318|79556508 hsa-miR-220a 0 0 1
chr10:79556318|79556508 hsa-miR-1183 0 1 0
chr10:79556318|79556508 hsa-miR-4286 0 1 0
chr10:79556318|79556508 hsa-miR-3943 1 0 0
chr10:79556318|79556508 hsa-miR-4454 1 0 0
chr10:79556318|79556508 hsa-miR-4641 1 0 0
chr10:79556318|79556508 hsa-miR-6071 0 1 0
chr10:79556318|79556508 hsa-miR-8075 1 1 0
chr10:79556318|79556508 hsa-miR-10226 0 1 0
chr10:79556318|79556508 hsa-miR-6879-3p 1 0 0
chr10:79556318|79556508 hsa-miR-1273h-3p 0 1 0
chr10:79556318|79556508 hsa-miR-296-5p 1 0 0
chr10:79556318|79556508 hsa-miR-5006-5p 0 1 0
chr10:79556318|79556508 hsa-miR-6757-3p 1 0 0
chr10:79556318|79556508 hsa-miR-324-5p 1 0 0
chr10:79556318|79556508 hsa-miR-4640-3p 1 0 0
chr10:79556318|79556508 hsa-miR-1306-5p 0 1 0
chr10:79556318|79556508 hsa-miR-6769a-3p 1 0 0
chr10:79556318|79556508 hsa-miR-4758-3p 0 1 0
chr10:79556318|79556508 hsa-miR-6741-3p 1 0 0
chr10:79556318|79556508 hsa-miR-6872-3p 1 1 0
chr10:79556318|79556508 hsa-miR-6746-3p 1 0 0
chr10:79556318|79556508 hsa-miR-6738-3p 1 0 0
chr10:79556318|79556508 hsa-miR-6859-3p 1 0 0
chr10:79556318|79556508 hsa-miR-6760-3p 1 0 0
chr10:79556318|79556508 hsa-miR-1229-3p 1 0 0
chr10:79556318|79556508 hsa-miR-6798-3p 0 1 0
chr10:79556318|79556508 hsa-miR-2116-3p 1 0 0
chr10:79556318|79556508 hsa-miR-6790-3p 0 1 0
chr10:79556318|79556508 hsa-miR-3156-3p 0 1 0
chr10:79556318|79556508 hsa-miR-3127-3p 1 0 0
chr10:79556318|79556508 hsa-miR-6836-5p 1 0 0
chr10:79556318|79556508 hsa-miR-324-3p 1 0 0
chr10:79556318|79556508 hsa-miR-6727-3p 1 0 0
chr10:79556318|79556508 hsa-miR-6801-3p 1 0 0
chr10:79556318|79556508 hsa-miR-504-5p 1 0 0
chr10:79556318|79556508 hsa-miR-6511b-3p 1 0 0
chr10:79556318|79556508 hsa-miR-4769-3p 1 0 0
chr10:79556318|79556508 hsa-miR-9983-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr10:79556318|79556508
ORF Type ORF1
Protein Length 54
Nucleotide Length 162
Protein Sequence MLILMIIWVNVLIKGESGAGGMGGGVNAHRGLKWGADLFISRKLLGSCLQWGAL
Nucleotide Sequence ATGTTAATTTTAATGATTATCTGGGTGAATGTATTAATAAAAGGGGAAAGTGGAGCCGGTGGCATGGGGGGTGGTGTGAATGCCCACCGAGGTCTGAAGTGGGGTGCAGATTTGTTCATCAGCAGAAAGTTACTCGGGTCATGTCTGCAGTGGGGGGCTCTT

CircID chr10:79556318|79556508
ORF Type ORF2
Protein Length 57
Nucleotide Length 171
Protein Sequence MAHVNFNDYLGECINKRGKWSRWHGGWCECPPRSEVGCRFVHQQKVTRVMSAVGGSS
Nucleotide Sequence CTGGCACATGTTAATTTTAATGATTATCTGGGTGAATGTATTAATAAAAGGGGAAAGTGGAGCCGGTGGCATGGGGGGTGGTGTGAATGCCCACCGAGGTCTGAAGTGGGGTGCAGATTTGTTCATCAGCAGAAAGTTACTCGGGTCATGTCTGCAGTGGGGGGCTCTTCC

CircID chr10:79556318|79556508
ORF Type ORF3
Protein Length 50
Nucleotide Length 150
Protein Sequence MLMNKSAPHFRPRWAFTPPPMPPAPLSPFINTFTQIIIKINMCQVLGCVL
Nucleotide Sequence CTGCTGATGAACAAATCTGCACCCCACTTCAGACCTCGGTGGGCATTCACACCACCCCCCATGCCACCGGCTCCACTTTCCCCTTTTATTAATACATTCACCCAGATAATCATTAAAATTAACATGTGCCAGGTCTTAGGATGTGTCTTG

CircID chr10:79556318|79556508
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MHPTSDLGGHSHHPPCHRLHFPLLLIHSPR
Nucleotide Sequence CTGCACCCCACTTCAGACCTCGGTGGGCATTCACACCACCCCCCATGCCACCGGCTCCACTTTCCCCTTTTATTAATACATTCACCCAGATAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites