CircRNA Information

General Information
circRNA Basic Information
CircID chr10:79556338|79556525
Strand -
CircType exon
Host Gene ENSG00000185303.14;
Algorism CIRI2;
Sequence CTGGCACATGTTAATTTTAATGATTATCTGGGTGAATGTATTAATAAAAGGGGAAAGTGGAGCCGGTGGCATGGGGGGTGGTGTGAATGCCCACCGAGGTCTGAAGTGGGGTGCAGATTTGTTCATCAGCAGAAAGTTACTCGGGTCATGTCTGCAGTGGGGGGCTCTTCCCTAGAGGCCTTGGCCGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:79556338|79556525 hsa-miR-181c-5p 0 0 1
chr10:79556338|79556525 hsa-miR-181c-3p 0 0 1
chr10:79556338|79556525 hsa-miR-377-5p 0 0 1
chr10:79556338|79556525 hsa-miR-377-3p 0 0 1
chr10:79556338|79556525 hsa-miR-181d-5p 0 0 1
chr10:79556338|79556525 hsa-miR-181d-3p 0 0 1
chr10:79556338|79556525 hsa-miR-655-5p 0 0 1
chr10:79556338|79556525 hsa-miR-655-3p 0 0 1
chr10:79556338|79556525 hsa-miR-541-5p 0 0 1
chr10:79556338|79556525 hsa-miR-541-3p 0 0 1
chr10:79556338|79556525 hsa-miR-1227-5p 0 0 1
chr10:79556338|79556525 hsa-miR-1227-3p 0 0 1
chr10:79556338|79556525 hsa-miR-1228-5p 0 0 1
chr10:79556338|79556525 hsa-miR-1228-3p 0 0 1
chr10:79556338|79556525 hsa-miR-1225-3p 0 0 1
chr10:79556338|79556525 hsa-miR-654-5p 0 0 1
chr10:79556338|79556525 hsa-miR-455-5p 0 0 1
chr10:79556338|79556525 hsa-miR-509-3-5p 1 1 1
chr10:79556338|79556525 hsa-miR-509-5p 0 1 1
chr10:79556338|79556525 hsa-miR-220b 0 0 1
chr10:79556338|79556525 hsa-miR-181a 0 0 1
chr10:79556338|79556525 hsa-miR-181b 0 0 1
chr10:79556338|79556525 hsa-miR-544 0 0 1
chr10:79556338|79556525 hsa-miR-220a 0 0 1
chr10:79556338|79556525 hsa-miR-892b 1 0 0
chr10:79556338|79556525 hsa-miR-1183 0 1 0
chr10:79556338|79556525 hsa-miR-4286 0 1 0
chr10:79556338|79556525 hsa-miR-4454 1 0 0
chr10:79556338|79556525 hsa-miR-4641 1 0 0
chr10:79556338|79556525 hsa-miR-4739 1 0 0
chr10:79556338|79556525 hsa-miR-6070 1 0 0
chr10:79556338|79556525 hsa-miR-6071 0 1 0
chr10:79556338|79556525 hsa-miR-8075 1 1 0
chr10:79556338|79556525 hsa-miR-6879-3p 1 0 0
chr10:79556338|79556525 hsa-miR-1273h-3p 0 1 0
chr10:79556338|79556525 hsa-miR-149-5p 1 0 0
chr10:79556338|79556525 hsa-miR-6822-3p 1 0 0
chr10:79556338|79556525 hsa-miR-874-5p 1 0 0
chr10:79556338|79556525 hsa-miR-6815-3p 1 0 0
chr10:79556338|79556525 hsa-miR-939-3p 1 0 0
chr10:79556338|79556525 hsa-miR-6763-3p 1 0 0
chr10:79556338|79556525 hsa-miR-6757-3p 1 0 0
chr10:79556338|79556525 hsa-miR-3648 1 0 0
chr10:79556338|79556525 hsa-miR-4640-3p 1 0 0
chr10:79556338|79556525 hsa-miR-1306-5p 0 1 0
chr10:79556338|79556525 hsa-miR-4758-3p 0 1 0
chr10:79556338|79556525 hsa-miR-6741-3p 1 0 0
chr10:79556338|79556525 hsa-miR-6872-3p 1 1 0
chr10:79556338|79556525 hsa-miR-6746-3p 1 0 0
chr10:79556338|79556525 hsa-miR-6738-3p 1 0 0
chr10:79556338|79556525 hsa-miR-6859-3p 1 0 0
chr10:79556338|79556525 hsa-miR-6760-3p 1 0 0
chr10:79556338|79556525 hsa-miR-1199-3p 1 0 0
chr10:79556338|79556525 hsa-miR-1255b-2-3p 1 0 0
chr10:79556338|79556525 hsa-miR-6798-3p 0 1 0
chr10:79556338|79556525 hsa-miR-6790-3p 0 1 0
chr10:79556338|79556525 hsa-miR-3156-3p 0 1 0
chr10:79556338|79556525 hsa-miR-4740-3p 1 0 0
chr10:79556338|79556525 hsa-miR-1343-5p 1 0 0
chr10:79556338|79556525 hsa-miR-3127-3p 1 0 0
chr10:79556338|79556525 hsa-miR-324-3p 1 0 0
chr10:79556338|79556525 hsa-miR-10398-5p 1 0 0
chr10:79556338|79556525 hsa-miR-6727-3p 1 0 0
chr10:79556338|79556525 hsa-miR-6801-3p 1 0 0
chr10:79556338|79556525 hsa-miR-6837-5p 0 1 0
chr10:79556338|79556525 hsa-miR-504-5p 1 0 0
chr10:79556338|79556525 hsa-miR-6511b-3p 1 0 0
chr10:79556338|79556525 hsa-miR-4756-5p 1 1 0
chr10:79556338|79556525 hsa-miR-4769-3p 1 0 0
chr10:79556338|79556525 hsa-miR-3059-3p 0 1 0
chr10:79556338|79556525 hsa-miR-9983-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr10:79556338|79556525
ORF Type ORF1
Protein Length 62
Nucleotide Length 186
Protein Sequence LAHVNFNDYLGECINKRGKWSRWHGGWCECPPRSEVGCRFVHQQKVTRVMSAVGGSSLEALA
Nucleotide Sequence CTGGCACATGTTAATTTTAATGATTATCTGGGTGAATGTATTAATAAAAGGGGAAAGTGGAGCCGGTGGCATGGGGGGTGGTGTGAATGCCCACCGAGGTCTGAAGTGGGGTGCAGATTTGTTCATCAGCAGAAAGTTACTCGGGTCATGTCTGCAGTGGGGGGCTCTTCCCTAGAGGCCTTGGCC

CircID chr10:79556338|79556525
ORF Type ORF2
Protein Length 55
Nucleotide Length 168
Protein Sequence MLILMIIWVNVLIKGESGAGGMGGGVNAHRGLKWGADLFISRKLLGSCLQWGALP
Nucleotide Sequence ATGTTAATTTTAATGATTATCTGGGTGAATGTATTAATAAAAGGGGAAAGTGGAGCCGGTGGCATGGGGGGTGGTGTGAATGCCCACCGAGGTCTGAAGTGGGGTGCAGATTTGTTCATCAGCAGAAAGTTACTCGGGTCATGTCTGCAGTGGGGGGCTCTTCCCTAG

CircID chr10:79556338|79556525
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MHPTSDLGGHSHHPPCHRLHFPLLLIHSPR
Nucleotide Sequence CTGCACCCCACTTCAGACCTCGGTGGGCATTCACACCACCCCCCATGCCACCGGCTCCACTTTCCCCTTTTATTAATACATTCACCCAGATAA

CircID chr10:79556338|79556525
ORF Type ORF4
Protein Length 44
Nucleotide Length 132
Protein Sequence MLMNKSAPHFRPRWAFTPPPMPPAPLSPFINTFTQIIIKINMCQ
Nucleotide Sequence CTGCTGATGAACAAATCTGCACCCCACTTCAGACCTCGGTGGGCATTCACACCACCCCCCATGCCACCGGCTCCACTTTCCCCTTTTATTAATACATTCACCCAGATAATCATTAAAATTAACATGTGCCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites