CircRNA Information

General Information
circRNA Basic Information
CircID chr10:79556714|79557021
Strand +
CircType exon
Host Gene ENSG00000185303.14;
Algorism CIRI2;
Sequence CAGCCTTGACACTCCCCTTGCAAACCATCCCAGCACTGCACCCCAGGCAGCCACTCCTAGCCTTGGCCTTTGGCATGAGATGGAGGCCTCCTTATTCCCCATCTGGTCCAGTTCCTTCACTTACAGATGGCAGCAGTGAGGCCTTGGGGTAGAAGGATCCTCCAAAGTCACACAGAGTGCCTGCCTCCTGGTCCCCTCAGCTCTGCCTCTGCAGCCCACTGCCTGCCCAGTGCCATCAGGATGAGCAGTACCGGCCAAGCATAATGACAGAGAGAGGCAGATTTCAGGGAAGCCCTGACTGTGTGGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:79556714|79557021 hsa-miR-34a-5p 0 0 1
chr10:79556714|79557021 hsa-miR-34a-3p 0 0 1
chr10:79556714|79557021 hsa-miR-183-5p 0 0 1
chr10:79556714|79557021 hsa-miR-183-3p 0 0 1
chr10:79556714|79557021 hsa-miR-122-5p 0 0 1
chr10:79556714|79557021 hsa-miR-122-3p 0 0 1
chr10:79556714|79557021 hsa-miR-134-5p 0 0 1
chr10:79556714|79557021 hsa-miR-134-3p 0 0 1
chr10:79556714|79557021 hsa-miR-449a 0 0 1
chr10:79556714|79557021 hsa-miR-604 0 0 1
chr10:79556714|79557021 hsa-miR-608 1 0 1
chr10:79556714|79557021 hsa-miR-612 0 1 1
chr10:79556714|79557021 hsa-miR-616-5p 0 0 1
chr10:79556714|79557021 hsa-miR-616-3p 0 0 1
chr10:79556714|79557021 hsa-miR-647 0 0 1
chr10:79556714|79557021 hsa-miR-650 1 1 1
chr10:79556714|79557021 hsa-miR-661 0 0 1
chr10:79556714|79557021 hsa-miR-449b-5p 0 0 1
chr10:79556714|79557021 hsa-miR-449b-3p 0 0 1
chr10:79556714|79557021 hsa-miR-765 0 0 1
chr10:79556714|79557021 hsa-miR-665 1 1 1
chr10:79556714|79557021 hsa-miR-940 0 0 1
chr10:79556714|79557021 hsa-miR-1237-5p 0 0 1
chr10:79556714|79557021 hsa-miR-1237-3p 0 0 1
chr10:79556714|79557021 hsa-miR-1248 0 0 1
chr10:79556714|79557021 hsa-miR-1252-5p 0 0 1
chr10:79556714|79557021 hsa-miR-1252-3p 0 0 1
chr10:79556714|79557021 hsa-miR-1827 0 0 1
chr10:79556714|79557021 hsa-miR-512-3p 0 0 1
chr10:79556714|79557021 hsa-miR-423-5p 0 0 1
chr10:79556714|79557021 hsa-miR-767-3p 0 1 1
chr10:79556714|79557021 hsa-miR-342-5p 1 1 1
chr10:79556714|79557021 hsa-miR-125a-5p 0 0 1
chr10:79556714|79557021 hsa-miR-34c-5p 0 0 1
chr10:79556714|79557021 hsa-miR-450b-5p 0 0 1
chr10:79556714|79557021 hsa-miR-1274a 0 0 1
chr10:79556714|79557021 hsa-miR-125b 0 0 1
chr10:79556714|79557021 hsa-miR-1285 0 0 1
chr10:79556714|79557021 hsa-miR-1254 0 0 1
chr10:79556714|79557021 hsa-miR-768-5p 0 0 1
chr10:79556714|79557021 hsa-miR-637 1 0 0
chr10:79556714|79557021 hsa-miR-645 1 0 0
chr10:79556714|79557021 hsa-miR-762 1 0 0
chr10:79556714|79557021 hsa-miR-760 1 0 0
chr10:79556714|79557021 hsa-miR-1183 1 0 0
chr10:79556714|79557021 hsa-miR-1202 1 0 0
chr10:79556714|79557021 hsa-miR-2861 1 0 0
chr10:79556714|79557021 hsa-miR-3137 1 0 0
chr10:79556714|79557021 hsa-miR-3164 0 1 0
chr10:79556714|79557021 hsa-miR-4298 1 0 0
chr10:79556714|79557021 hsa-miR-3654 0 1 0
chr10:79556714|79557021 hsa-miR-1268b 1 0 0
chr10:79556714|79557021 hsa-miR-4451 0 1 0
chr10:79556714|79557021 hsa-miR-4466 1 0 0
chr10:79556714|79557021 hsa-miR-4498 1 0 0
chr10:79556714|79557021 hsa-miR-4512 0 1 0
chr10:79556714|79557021 hsa-miR-4514 0 1 0
chr10:79556714|79557021 hsa-miR-4519 1 0 0
chr10:79556714|79557021 hsa-miR-1587 0 1 0
chr10:79556714|79557021 hsa-miR-4651 1 0 0
chr10:79556714|79557021 hsa-miR-4656 1 1 0
chr10:79556714|79557021 hsa-miR-4688 1 0 0
chr10:79556714|79557021 hsa-miR-4689 1 0 0
chr10:79556714|79557021 hsa-miR-4692 0 1 0
chr10:79556714|79557021 hsa-miR-4741 1 0 0
chr10:79556714|79557021 hsa-miR-5572 1 0 0
chr10:79556714|79557021 hsa-miR-5787 1 0 0
chr10:79556714|79557021 hsa-miR-6069 1 1 0
chr10:79556714|79557021 hsa-miR-6081 1 0 0
chr10:79556714|79557021 hsa-miR-6132 1 0 0
chr10:79556714|79557021 hsa-miR-6860 1 1 0
chr10:79556714|79557021 hsa-miR-7150 1 0 0
chr10:79556714|79557021 hsa-miR-7703 1 0 0
chr10:79556714|79557021 hsa-miR-8089 1 0 0
chr10:79556714|79557021 hsa-miR-12119 1 0 0
chr10:79556714|79557021 hsa-miR-143-5p 1 1 0
chr10:79556714|79557021 hsa-miR-4433b-3p 1 1 0
chr10:79556714|79557021 hsa-miR-92a-1-5p 1 0 0
chr10:79556714|79557021 hsa-miR-22-3p 1 0 0
chr10:79556714|79557021 hsa-miR-6734-5p 1 1 0
chr10:79556714|79557021 hsa-miR-4731-5p 1 0 0
chr10:79556714|79557021 hsa-miR-504-3p 1 0 0
chr10:79556714|79557021 hsa-miR-6747-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6765-5p 1 0 0
chr10:79556714|79557021 hsa-miR-215-3p 0 1 0
chr10:79556714|79557021 hsa-miR-6861-5p 1 1 0
chr10:79556714|79557021 hsa-miR-4687-3p 1 0 0
chr10:79556714|79557021 hsa-miR-6510-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6728-5p 1 1 0
chr10:79556714|79557021 hsa-miR-3692-5p 1 0 0
chr10:79556714|79557021 hsa-miR-1227-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6089 1 0 0
chr10:79556714|79557021 hsa-miR-6757-5p 1 0 0
chr10:79556714|79557021 hsa-miR-4695-5p 0 1 0
chr10:79556714|79557021 hsa-miR-4753-5p 0 1 0
chr10:79556714|79557021 hsa-miR-7160-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6842-3p 1 0 0
chr10:79556714|79557021 hsa-miR-6806-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6721-5p 1 1 0
chr10:79556714|79557021 hsa-miR-8069 1 1 0
chr10:79556714|79557021 hsa-miR-6873-3p 0 1 0
chr10:79556714|79557021 hsa-miR-1292-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6772-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6796-5p 1 0 0
chr10:79556714|79557021 hsa-miR-185-3p 1 0 0
chr10:79556714|79557021 hsa-miR-6829-5p 1 1 0
chr10:79556714|79557021 hsa-miR-656-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6805-5p 1 0 0
chr10:79556714|79557021 hsa-miR-2467-3p 1 1 0
chr10:79556714|79557021 hsa-miR-6782-5p 1 0 0
chr10:79556714|79557021 hsa-miR-5006-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6852-5p 0 1 0
chr10:79556714|79557021 hsa-miR-1226-5p 1 0 0
chr10:79556714|79557021 hsa-miR-4793-5p 1 1 0
chr10:79556714|79557021 hsa-miR-204-3p 1 0 0
chr10:79556714|79557021 hsa-miR-1229-5p 1 0 0
chr10:79556714|79557021 hsa-miR-4640-5p 1 0 0
chr10:79556714|79557021 hsa-miR-5001-3p 0 1 0
chr10:79556714|79557021 hsa-miR-3127-5p 0 1 0
chr10:79556714|79557021 hsa-let-7b-5p 1 0 0
chr10:79556714|79557021 hsa-miR-4732-5p 1 1 0
chr10:79556714|79557021 hsa-miR-6834-5p 1 0 0
chr10:79556714|79557021 hsa-miR-4743-5p 1 0 0
chr10:79556714|79557021 hsa-miR-3160-3p 0 1 0
chr10:79556714|79557021 hsa-miR-4638-3p 1 0 0
chr10:79556714|79557021 hsa-miR-1304-3p 0 1 0
chr10:79556714|79557021 hsa-miR-7156-3p 1 0 0
chr10:79556714|79557021 hsa-miR-3158-5p 0 1 0
chr10:79556714|79557021 hsa-miR-194-3p 0 1 0
chr10:79556714|79557021 hsa-miR-4776-5p 1 1 0
chr10:79556714|79557021 hsa-miR-6864-5p 0 1 0
chr10:79556714|79557021 hsa-miR-1250-5p 1 0 0
chr10:79556714|79557021 hsa-miR-3158-3p 0 1 0
chr10:79556714|79557021 hsa-miR-6814-5p 0 1 0
chr10:79556714|79557021 hsa-miR-6768-3p 0 1 0
chr10:79556714|79557021 hsa-miR-3144-5p 0 1 0
chr10:79556714|79557021 hsa-miR-6503-3p 1 1 0
chr10:79556714|79557021 hsa-miR-10400-5p 1 0 0
chr10:79556714|79557021 hsa-miR-1207-5p 1 0 0
chr10:79556714|79557021 hsa-miR-4763-3p 1 0 0
chr10:79556714|79557021 hsa-miR-6812-5p 1 1 0
chr10:79556714|79557021 hsa-miR-6865-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6893-5p 0 1 0
chr10:79556714|79557021 hsa-miR-6737-5p 1 1 0
chr10:79556714|79557021 hsa-miR-6743-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6754-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6756-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6803-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6819-5p 1 1 0
chr10:79556714|79557021 hsa-miR-7107-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6722-3p 1 0 0
chr10:79556714|79557021 hsa-miR-6751-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6779-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6808-5p 1 1 0
chr10:79556714|79557021 hsa-miR-6875-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6879-5p 1 0 0
chr10:79556714|79557021 hsa-miR-3620-5p 1 1 0
chr10:79556714|79557021 hsa-miR-5189-5p 0 1 0
chr10:79556714|79557021 hsa-miR-6836-5p 1 0 0
chr10:79556714|79557021 hsa-miR-328-5p 1 0 0
chr10:79556714|79557021 hsa-miR-449c-5p 0 1 0
chr10:79556714|79557021 hsa-miR-4649-5p 1 0 0
chr10:79556714|79557021 hsa-miR-4685-5p 1 1 0
chr10:79556714|79557021 hsa-miR-4726-5p 1 0 0
chr10:79556714|79557021 hsa-miR-4749-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6735-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6794-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6795-5p 1 1 0
chr10:79556714|79557021 hsa-miR-6846-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6887-5p 1 0 0
chr10:79556714|79557021 hsa-miR-3187-5p 1 1 0
chr10:79556714|79557021 hsa-miR-6831-5p 1 1 0
chr10:79556714|79557021 hsa-miR-6885-5p 1 0 0
chr10:79556714|79557021 hsa-miR-939-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6511a-5p 0 1 0
chr10:79556714|79557021 hsa-miR-3085-5p 1 0 0
chr10:79556714|79557021 hsa-miR-1914-3p 1 0 0
chr10:79556714|79557021 hsa-miR-4665-5p 1 0 0
chr10:79556714|79557021 hsa-miR-4646-5p 1 0 0
chr10:79556714|79557021 hsa-miR-4667-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6791-5p 1 0 0
chr10:79556714|79557021 hsa-miR-6762-5p 1 0 0
chr10:79556714|79557021 hsa-miR-4756-5p 1 1 0
chr10:79556714|79557021 hsa-miR-6744-3p 1 1 0
chr10:79556714|79557021 hsa-miR-6817-5p 0 1 0
chr10:79556714|79557021 hsa-miR-2682-5p 0 1 0
chr10:79556714|79557021 hsa-miR-549a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:79556714|79557021
ORF Type ORF1
Protein Length 53
Nucleotide Length 162
Protein Sequence MVQFLHLQMAAVRPWGRRILQSHTECLPPGPLSSASAAHCLPSAIRMSSTGQA
Nucleotide Sequence CTGGTCCAGTTCCTTCACTTACAGATGGCAGCAGTGAGGCCTTGGGGTAGAAGGATCCTCCAAAGTCACACAGAGTGCCTGCCTCCTGGTCCCCTCAGCTCTGCCTCTGCAGCCCACTGCCTGCCCAGTGCCATCAGGATGAGCAGTACCGGCCAAGCATAA
CircID chr10:79556714|79557021
ORF Type ORF2
Protein Length 48
Nucleotide Length 147
Protein Sequence MTLPLQTIPALHPRQPLLALAFGMRWRPPYSPSGPVPSLTDGSSEALG
Nucleotide Sequence TTGACACTCCCCTTGCAAACCATCCCAGCACTGCACCCCAGGCAGCCACTCCTAGCCTTGGCCTTTGGCATGAGATGGAGGCCTCCTTATTCCCCATCTGGTCCAGTTCCTTCACTTACAGATGGCAGCAGTGAGGCCTTGGGGTAG
CircID chr10:79556714|79557021
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MPAQCHQDEQYRPSIMTERGRFQGSPDCVE
Nucleotide Sequence CTGCCTGCCCAGTGCCATCAGGATGAGCAGTACCGGCCAAGCATAATGACAGAGAGAGGCAGATTTCAGGGAAGCCCTGACTGTGTGGAG
CircID chr10:79556714|79557021
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MKSASLCHYAWPVLLILMALGRQWAAEAELRGPGGRHSV
Nucleotide Sequence CTGAAATCTGCCTCTCTCTGTCATTATGCTTGGCCGGTACTGCTCATCCTGATGGCACTGGGCAGGCAGTGGGCTGCAGAGGCAGAGCTGAGGGGACCAGGAGGCAGGCACTCTGTGTGA
CircID chr10:79556714|79557021
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MCDFGGSFYPKASLLPSVSEGTGPDGE
Nucleotide Sequence CTGTGTGACTTTGGAGGATCCTTCTACCCCAAGGCCTCACTGCTGCCATCTGTAAGTGAAGGAACTGGACCAGATGGGGAATAA
CircID chr10:79556714|79557021
ORF Type ORF6
Protein Length 25
Nucleotide Length 75
Protein Sequence MPKAKARSGCLGCSAGMVCKGSVKA
Nucleotide Sequence ATGCCAAAGGCCAAGGCTAGGAGTGGCTGCCTGGGGTGCAGTGCTGGGATGGTTTGCAAGGGGAGTGTCAAGGCT
CircID chr10:79556714|79557021
ORF Type ORF7
Protein Length 49
Nucleotide Length 150
Protein Sequence MSLCLAGTAHPDGTGQAVGCRGRAEGTRRQALCVTLEDPSTPRPHCCHL
Nucleotide Sequence CTGTCATTATGCTTGGCCGGTACTGCTCATCCTGATGGCACTGGGCAGGCAGTGGGCTGCAGAGGCAGAGCTGAGGGGACCAGGAGGCAGGCACTCTGTGTGACTTTGGAGGATCCTTCTACCCCAAGGCCTCACTGCTGCCATCTGTAA
CircID chr10:79556714|79557021
ORF Type ORF8
Protein Length 37
Nucleotide Length 111
Protein Sequence MDQMGNKEASISCQRPRLGVAAWGAVLGWFARGVSRL
Nucleotide Sequence CTGGACCAGATGGGGAATAAGGAGGCCTCCATCTCATGCCAAAGGCCAAGGCTAGGAGTGGCTGCCTGGGGTGCAGTGCTGGGATGGTTTGCAAGGGGAGTGTCAAGGCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab