CircRNA Information

General Information
circRNA Basic Information
CircID chr10:79556920|79557021
Strand +
CircType exon
Host Gene ENSG00000185303.14;
Algorism CIRI2;
Sequence CAGCCTTGACACTCCCCTTGCAAACCATCCCAGCACTGCACCCCAGGCAGCCACTCCTAGCCTTGGCCTTTGGCATGAGATGGAGGCCTCCTTATTCCCCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:79556920|79557021 hsa-miR-122-5p 0 0 1
chr10:79556920|79557021 hsa-miR-122-3p 0 0 1
chr10:79556920|79557021 hsa-miR-604 0 0 1
chr10:79556920|79557021 hsa-miR-608 1 0 1
chr10:79556920|79557021 hsa-miR-647 0 0 1
chr10:79556920|79557021 hsa-miR-661 0 0 1
chr10:79556920|79557021 hsa-miR-512-3p 0 0 1
chr10:79556920|79557021 hsa-miR-342-5p 0 1 1
chr10:79556920|79557021 hsa-miR-450b-5p 0 0 1
chr10:79556920|79557021 hsa-miR-1254 0 0 1
chr10:79556920|79557021 hsa-miR-1268b 1 0 0
chr10:79556920|79557021 hsa-miR-4466 1 0 0
chr10:79556920|79557021 hsa-miR-4519 1 0 0
chr10:79556920|79557021 hsa-miR-4651 1 0 0
chr10:79556920|79557021 hsa-miR-5572 1 0 0
chr10:79556920|79557021 hsa-miR-5787 1 0 0
chr10:79556920|79557021 hsa-miR-6069 1 1 0
chr10:79556920|79557021 hsa-miR-6081 1 0 0
chr10:79556920|79557021 hsa-miR-6132 1 0 0
chr10:79556920|79557021 hsa-miR-7150 1 0 0
chr10:79556920|79557021 hsa-miR-8089 1 0 0
chr10:79556920|79557021 hsa-miR-143-5p 1 1 0
chr10:79556920|79557021 hsa-miR-4433b-3p 1 1 0
chr10:79556920|79557021 hsa-miR-92a-1-5p 1 0 0
chr10:79556920|79557021 hsa-miR-4731-5p 1 0 0
chr10:79556920|79557021 hsa-miR-6857-5p 1 0 0
chr10:79556920|79557021 hsa-miR-6510-5p 1 0 0
chr10:79556920|79557021 hsa-miR-6728-5p 1 1 0
chr10:79556920|79557021 hsa-miR-6757-5p 1 0 0
chr10:79556920|79557021 hsa-miR-4753-5p 0 1 0
chr10:79556920|79557021 hsa-miR-8069 1 1 0
chr10:79556920|79557021 hsa-miR-6716-5p 1 0 0
chr10:79556920|79557021 hsa-miR-6772-5p 1 0 0
chr10:79556920|79557021 hsa-miR-6782-5p 1 0 0
chr10:79556920|79557021 hsa-miR-5006-5p 1 0 0
chr10:79556920|79557021 hsa-miR-6852-5p 0 1 0
chr10:79556920|79557021 hsa-miR-204-3p 1 0 0
chr10:79556920|79557021 hsa-miR-1207-5p 1 0 0
chr10:79556920|79557021 hsa-miR-4763-3p 1 0 0
chr10:79556920|79557021 hsa-miR-6812-5p 1 1 0
chr10:79556920|79557021 hsa-miR-6737-5p 1 1 0
chr10:79556920|79557021 hsa-miR-6756-5p 1 0 0
chr10:79556920|79557021 hsa-miR-6803-5p 1 0 0
chr10:79556920|79557021 hsa-miR-6819-5p 1 1 0
chr10:79556920|79557021 hsa-miR-7107-5p 1 0 0
chr10:79556920|79557021 hsa-miR-6779-5p 1 0 0
chr10:79556920|79557021 hsa-miR-6780b-5p 1 0 0
chr10:79556920|79557021 hsa-miR-328-5p 1 0 0
chr10:79556920|79557021 hsa-miR-4685-5p 1 1 0
chr10:79556920|79557021 hsa-miR-6791-5p 1 0 0
chr10:79556920|79557021 hsa-miR-4756-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr10:79556920|79557021
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MTLPLQTIPALHPRQPLLALAFGMRWRPPYSP
Nucleotide Sequence TTGACACTCCCCTTGCAAACCATCCCAGCACTGCACCCCAGGCAGCCACTCCTAGCCTTGGCCTTTGGCATGAGATGGAGGCCTCCTTATTCCCCA

CircID chr10:79556920|79557021
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MGNKEASISCQRPRLGVAAWGAVLGWFARGVSRL
Nucleotide Sequence ATGGGGAATAAGGAGGCCTCCATCTCATGCCAAAGGCCAAGGCTAGGAGTGGCTGCCTGGGGTGCAGTGCTGGGATGGTTTGCAAGGGGAGTGTCAAGGCTG

CircID chr10:79556920|79557021
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MPKAKARSGCLGCSAGMVCKGSVKA
Nucleotide Sequence ATGCCAAAGGCCAAGGCTAGGAGTGGCTGCCTGGGGTGCAGTGCTGGGATGGTTTGCAAGGGGAGTGTCAAGGCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites