CircRNA Information

General Information
circRNA Basic Information
CircID chr10:79614003|79614173
Strand -
CircType exon
Host Gene ENSG00000122852.13;
Algorism CIRI2;
Sequence CGAGGGGAGCCCGCAGGTCGGGGAAAAGAGCAGTGTGTGGAGATGTACACAGATGGGCAGTGGAATGACAGGAACTGCCTGTACTCCCGACTGACCATCTGTGAGTTCTGAGAGGCATTTAGGCCATGGGACAGGGAGGACGCTCTCTGGCCTTCGGCCTCCATCCTGAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:79614003|79614173 hsa-miR-603 0 1 1
chr10:79614003|79614173 hsa-miR-616-5p 0 0 1
chr10:79614003|79614173 hsa-miR-616-3p 0 0 1
chr10:79614003|79614173 hsa-miR-650 0 0 1
chr10:79614003|79614173 hsa-miR-339-5p 0 1 1
chr10:79614003|79614173 hsa-miR-1274a 0 0 1
chr10:79614003|79614173 hsa-miR-1274b 0 0 1
chr10:79614003|79614173 hsa-miR-1208 1 0 0
chr10:79614003|79614173 hsa-miR-2392 0 1 0
chr10:79614003|79614173 hsa-miR-4734 0 1 0
chr10:79614003|79614173 hsa-miR-12122 0 1 0
chr10:79614003|79614173 hsa-miR-6749-3p 0 1 0
chr10:79614003|79614173 hsa-miR-215-3p 0 1 0
chr10:79614003|79614173 hsa-miR-6089 0 1 0
chr10:79614003|79614173 hsa-miR-6880-5p 0 1 0
chr10:79614003|79614173 hsa-miR-6728-3p 1 0 0
chr10:79614003|79614173 hsa-miR-6763-3p 1 0 0
chr10:79614003|79614173 hsa-miR-6757-3p 1 0 0
chr10:79614003|79614173 hsa-miR-7113-3p 0 1 0
chr10:79614003|79614173 hsa-miR-6771-5p 0 1 0
chr10:79614003|79614173 hsa-miR-1266-3p 0 1 0
chr10:79614003|79614173 hsa-miR-2115-3p 0 1 0
chr10:79614003|79614173 hsa-miR-6877-5p 0 1 0
chr10:79614003|79614173 hsa-miR-4707-5p 1 0 0
chr10:79614003|79614173 hsa-miR-6743-3p 1 0 0
chr10:79614003|79614173 hsa-miR-3180-5p 1 0 0
chr10:79614003|79614173 hsa-miR-6773-3p 0 1 0
chr10:79614003|79614173 hsa-miR-92a-3p 1 0 0
chr10:79614003|79614173 hsa-miR-6748-3p 0 1 0
chr10:79614003|79614173 hsa-miR-7152-5p 0 1 0
chr10:79614003|79614173 hsa-miR-3670 0 1 0
chr10:79614003|79614173 hsa-miR-4802-5p 0 1 0
chr10:79614003|79614173 hsa-miR-6890-3p 0 1 0
chr10:79614003|79614173 hsa-miR-6509-3p 0 1 0
chr10:79614003|79614173 hsa-miR-196a-5p 0 1 0
chr10:79614003|79614173 hsa-miR-34b-5p 0 1 0
chr10:79614003|79614173 hsa-miR-324-3p 1 1 0
chr10:79614003|79614173 hsa-miR-10398-5p 0 1 0
chr10:79614003|79614173 hsa-miR-6805-3p 1 0 0
chr10:79614003|79614173 hsa-miR-6769b-3p 0 1 0
chr10:79614003|79614173 hsa-miR-196b-5p 0 1 0
chr10:79614003|79614173 hsa-miR-2682-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr10:79614003|79614173
ORF Type ORF1
Protein Length 54
Nucleotide Length 162
Protein Sequence MEAEGQRASSLSHGLNASQNSQMVSREYRQFLSFHCPSVYISTHCSFPRPAGSP
Nucleotide Sequence ATGGAGGCCGAAGGCCAGAGAGCGTCCTCCCTGTCCCATGGCCTAAATGCCTCTCAGAACTCACAGATGGTCAGTCGGGAGTACAGGCAGTTCCTGTCATTCCACTGCCCATCTGTGTACATCTCCACACACTGCTCTTTTCCCCGACCTGCGGGCTCCCCT

CircID chr10:79614003|79614173
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MPLRTHRWSVGSTGSSCHSTAHLCTSPHTALFPDLRAPL
Nucleotide Sequence ATGCCTCTCAGAACTCACAGATGGTCAGTCGGGAGTACAGGCAGTTCCTGTCATTCCACTGCCCATCTGTGTACATCTCCACACACTGCTCTTTTCCCCGACCTGCGGGCTCCCCTC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites