CircRNA Information

General Information
circRNA Basic Information
CircID chr10:79614676|79614996
Strand +
CircType exon
Host Gene ENSG00000122852.13;
Algorism CIRI2;
Sequence CCCACGACATATCCTAAGACCTGGCACGTGATAATTTTAATGAAATATCTGGGTGAATGGATTAATGAAAGGAGAAAGCAGAGCCAGTGGTGTGGGGGGTGGTGTGAATGCCCACTGAAATCTGAAGTAGGGTGCAGATTTGTTCATCAGTTGAAAGTTACTCGGGTCACATCTGAAGGCGGCTCTAGGTCACCCTAGAGGCCTAGGCTGGCTGTCTTCAGGTCAGGGGGCTGAGTTGCCATTCAAAGACTCAAAGGAGTGAATCGTACACATCAATCATGGGGTTGGCTTGGCCACCACCCTGCTGGAACACTACCTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:79614676|79614996 hsa-miR-192-5p 0 0 1
chr10:79614676|79614996 hsa-miR-192-3p 0 0 1
chr10:79614676|79614996 hsa-miR-214-5p 0 0 1
chr10:79614676|79614996 hsa-miR-214-3p 0 0 1
chr10:79614676|79614996 hsa-miR-215-5p 0 0 1
chr10:79614676|79614996 hsa-miR-215-3p 0 0 1
chr10:79614676|79614996 hsa-miR-149-5p 0 0 1
chr10:79614676|79614996 hsa-miR-149-3p 0 0 1
chr10:79614676|79614996 hsa-miR-377-5p 0 0 1
chr10:79614676|79614996 hsa-miR-377-3p 0 0 1
chr10:79614676|79614996 hsa-miR-196b-5p 0 0 1
chr10:79614676|79614996 hsa-miR-196b-3p 0 0 1
chr10:79614676|79614996 hsa-miR-627-5p 0 0 1
chr10:79614676|79614996 hsa-miR-627-3p 0 0 1
chr10:79614676|79614996 hsa-miR-631 0 0 1
chr10:79614676|79614996 hsa-miR-651-5p 0 0 1
chr10:79614676|79614996 hsa-miR-651-3p 0 0 1
chr10:79614676|79614996 hsa-miR-892b 0 0 1
chr10:79614676|79614996 hsa-miR-190b-5p 0 0 1
chr10:79614676|79614996 hsa-miR-190b-3p 0 0 1
chr10:79614676|79614996 hsa-miR-760 0 0 1
chr10:79614676|79614996 hsa-miR-924 0 0 1
chr10:79614676|79614996 hsa-miR-1228-5p 0 0 1
chr10:79614676|79614996 hsa-miR-1228-3p 0 0 1
chr10:79614676|79614996 hsa-miR-1293 0 0 1
chr10:79614676|79614996 hsa-miR-1305 0 0 1
chr10:79614676|79614996 hsa-miR-512-5p 0 0 1
chr10:79614676|79614996 hsa-miR-576-3p 0 0 1
chr10:79614676|79614996 hsa-miR-338-3p 0 0 1
chr10:79614676|79614996 hsa-miR-483-3p 0 0 1
chr10:79614676|79614996 hsa-miR-142-3p 0 0 1
chr10:79614676|79614996 hsa-miR-220b 0 0 1
chr10:79614676|79614996 hsa-miR-196a 0 0 1
chr10:79614676|79614996 hsa-miR-220a 0 0 1
chr10:79614676|79614996 hsa-miR-190 0 0 1
chr10:79614676|79614996 hsa-miR-608 1 0 0
chr10:79614676|79614996 hsa-miR-661 1 0 0
chr10:79614676|79614996 hsa-miR-663b 1 0 0
chr10:79614676|79614996 hsa-miR-1913 1 0 0
chr10:79614676|79614996 hsa-miR-3943 1 0 0
chr10:79614676|79614996 hsa-miR-4454 1 0 0
chr10:79614676|79614996 hsa-miR-4730 1 0 0
chr10:79614676|79614996 hsa-miR-197-3p 1 0 0
chr10:79614676|79614996 hsa-miR-152-5p 1 0 0
chr10:79614676|79614996 hsa-miR-3194-3p 1 0 0
chr10:79614676|79614996 hsa-miR-6822-3p 1 0 0
chr10:79614676|79614996 hsa-miR-6858-3p 1 0 0
chr10:79614676|79614996 hsa-miR-532-3p 1 0 0
chr10:79614676|79614996 hsa-miR-6757-3p 1 0 0
chr10:79614676|79614996 hsa-miR-324-5p 1 0 0
chr10:79614676|79614996 hsa-miR-6739-3p 1 0 0
chr10:79614676|79614996 hsa-miR-4640-3p 1 0 0
chr10:79614676|79614996 hsa-miR-4742-3p 1 0 0
chr10:79614676|79614996 hsa-miR-6871-3p 1 0 0
chr10:79614676|79614996 hsa-miR-6859-3p 1 0 0
chr10:79614676|79614996 hsa-miR-6802-3p 1 0 0
chr10:79614676|79614996 hsa-miR-3620-3p 1 0 0
chr10:79614676|79614996 hsa-miR-1229-3p 1 0 0
chr10:79614676|79614996 hsa-miR-188-3p 1 0 0
chr10:79614676|79614996 hsa-miR-6798-3p 1 0 0
chr10:79614676|79614996 hsa-miR-6729-3p 1 0 0
chr10:79614676|79614996 hsa-miR-6800-3p 1 0 0
chr10:79614676|79614996 hsa-miR-3162-3p 1 0 0
chr10:79614676|79614996 hsa-miR-4740-3p 1 0 0
chr10:79614676|79614996 hsa-miR-6777-5p 1 0 0
chr10:79614676|79614996 hsa-miR-324-3p 1 0 0
chr10:79614676|79614996 hsa-miR-6784-3p 1 0 0
chr10:79614676|79614996 hsa-miR-6805-3p 1 0 0
chr10:79614676|79614996 hsa-miR-504-5p 1 0 0
chr10:79614676|79614996 hsa-miR-6511b-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr10:79614676|79614996
ORF Type ORF1
Protein Length 52
Nucleotide Length 159
Protein Sequence MKYLGEWINERRKQSQWCGGWCECPLKSEVGCRFVHQLKVTRVTSEGGSRSP
Nucleotide Sequence ATGAAATATCTGGGTGAATGGATTAATGAAAGGAGAAAGCAGAGCCAGTGGTGTGGGGGGTGGTGTGAATGCCCACTGAAATCTGAAGTAGGGTGCAGATTTGTTCATCAGTTGAAAGTTACTCGGGTCACATCTGAAGGCGGCTCTAGGTCACCCTAG

CircID chr10:79614676|79614996
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MKAALGHPRGLGWLSSGQGAELPFKDSKE
Nucleotide Sequence CTGAAGGCGGCTCTAGGTCACCCTAGAGGCCTAGGCTGGCTGTCTTCAGGTCAGGGGGCTGAGTTGCCATTCAAAGACTCAAAGGAGTGA

CircID chr10:79614676|79614996
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MSCHSKTQRSESYTSIMGLAWPPPCWNTTW
Nucleotide Sequence CTGAGTTGCCATTCAAAGACTCAAAGGAGTGAATCGTACACATCAATCATGGGGTTGGCTTGGCCACCACCCTGCTGGAACACTACCTGG

CircID chr10:79614676|79614996
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MMNKSAPYFRFQWAFTPPPTPLALLSPFINPFTQIFH
Nucleotide Sequence CTGATGAACAAATCTGCACCCTACTTCAGATTTCAGTGGGCATTCACACCACCCCCCACACCACTGGCTCTGCTTTCTCCTTTCATTAATCCATTCACCCAGATATTTCATTAA

CircID chr10:79614676|79614996
ORF Type ORF5
Protein Length 45
Nucleotide Length 135
Protein Sequence MHPTSDFSGHSHHPPHHWLCFLLSLIHSPRYFIKIITCQVLGYVV
Nucleotide Sequence CTGCACCCTACTTCAGATTTCAGTGGGCATTCACACCACCCCCCACACCACTGGCTCTGCTTTCTCCTTTCATTAATCCATTCACCCAGATATTTCATTAAAATTATCACGTGCCAGGTCTTAGGATATGTCGTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites