CircRNA Information

General Information
circRNA Basic Information
CircID chr10:79614681|79614976
Strand +
CircType exon
Host Gene ENSG00000122852.13;
Algorism CIRI2;
Sequence CTGGCACGTGATAATTTTAATGAAATATCTGGGTGAATGGATTAATGAAAGGAGAAAGCAGAGCCAGTGGTGTGGGGGGTGGTGTGAATGCCCACTGAAATCTGAAGTAGGGTGCAGATTTGTTCATCAGTTGAAAGTTACTCGGGTCACATCTGAAGGCGGCTCTAGGTCACCCTAGAGGCCTAGGCTGGCTGTCTTCAGGTCAGGGGGCTGAGTTGCCATTCAAAGACTCAAAGGAGTGAATCGTACACATCAATCATGGGGTTGGCTTGGCCACCACCCTGCTGGAACACTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:79614681|79614976 hsa-miR-192-5p 0 0 1
chr10:79614681|79614976 hsa-miR-192-3p 0 0 1
chr10:79614681|79614976 hsa-miR-214-5p 0 0 1
chr10:79614681|79614976 hsa-miR-214-3p 0 0 1
chr10:79614681|79614976 hsa-miR-215-5p 0 0 1
chr10:79614681|79614976 hsa-miR-215-3p 0 0 1
chr10:79614681|79614976 hsa-miR-149-5p 0 0 1
chr10:79614681|79614976 hsa-miR-149-3p 0 0 1
chr10:79614681|79614976 hsa-miR-377-5p 0 0 1
chr10:79614681|79614976 hsa-miR-377-3p 0 0 1
chr10:79614681|79614976 hsa-miR-627-5p 0 0 1
chr10:79614681|79614976 hsa-miR-627-3p 0 0 1
chr10:79614681|79614976 hsa-miR-631 0 0 1
chr10:79614681|79614976 hsa-miR-892b 1 0 1
chr10:79614681|79614976 hsa-miR-760 0 0 1
chr10:79614681|79614976 hsa-miR-924 0 0 1
chr10:79614681|79614976 hsa-miR-1228-5p 0 0 1
chr10:79614681|79614976 hsa-miR-1228-3p 0 0 1
chr10:79614681|79614976 hsa-miR-1293 0 0 1
chr10:79614681|79614976 hsa-miR-1305 0 0 1
chr10:79614681|79614976 hsa-miR-512-5p 0 0 1
chr10:79614681|79614976 hsa-miR-576-3p 0 0 1
chr10:79614681|79614976 hsa-miR-338-3p 0 0 1
chr10:79614681|79614976 hsa-miR-483-3p 0 0 1
chr10:79614681|79614976 hsa-miR-142-3p 0 0 1
chr10:79614681|79614976 hsa-miR-220b 0 0 1
chr10:79614681|79614976 hsa-miR-220a 0 0 1
chr10:79614681|79614976 hsa-miR-608 1 0 0
chr10:79614681|79614976 hsa-miR-661 1 0 0
chr10:79614681|79614976 hsa-miR-663b 1 0 0
chr10:79614681|79614976 hsa-miR-1913 1 0 0
chr10:79614681|79614976 hsa-miR-3943 1 0 0
chr10:79614681|79614976 hsa-miR-4454 1 0 0
chr10:79614681|79614976 hsa-miR-4730 1 0 0
chr10:79614681|79614976 hsa-miR-197-3p 1 0 0
chr10:79614681|79614976 hsa-miR-6822-3p 1 0 0
chr10:79614681|79614976 hsa-miR-6858-3p 1 0 0
chr10:79614681|79614976 hsa-miR-532-3p 1 0 0
chr10:79614681|79614976 hsa-miR-6757-3p 1 0 0
chr10:79614681|79614976 hsa-miR-324-5p 1 0 0
chr10:79614681|79614976 hsa-miR-6739-3p 1 0 0
chr10:79614681|79614976 hsa-miR-4640-3p 1 0 0
chr10:79614681|79614976 hsa-miR-629-3p 1 0 0
chr10:79614681|79614976 hsa-miR-6871-3p 1 0 0
chr10:79614681|79614976 hsa-miR-6859-3p 1 0 0
chr10:79614681|79614976 hsa-miR-6802-3p 1 0 0
chr10:79614681|79614976 hsa-miR-1255b-2-3p 1 0 0
chr10:79614681|79614976 hsa-miR-3620-3p 1 0 0
chr10:79614681|79614976 hsa-miR-1229-3p 1 0 0
chr10:79614681|79614976 hsa-miR-188-3p 1 0 0
chr10:79614681|79614976 hsa-miR-6798-3p 1 0 0
chr10:79614681|79614976 hsa-miR-6729-3p 1 0 0
chr10:79614681|79614976 hsa-miR-3162-3p 1 0 0
chr10:79614681|79614976 hsa-miR-4740-3p 1 0 0
chr10:79614681|79614976 hsa-miR-324-3p 1 0 0
chr10:79614681|79614976 hsa-miR-6784-3p 1 0 0
chr10:79614681|79614976 hsa-miR-6805-3p 1 0 0
chr10:79614681|79614976 hsa-miR-504-5p 1 0 0
chr10:79614681|79614976 hsa-miR-6511b-3p 1 0 0
chr10:79614681|79614976 hsa-miR-4661-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr10:79614681|79614976
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MSCHSKTQRSESYTSIMGLAWPPPCWNT
Nucleotide Sequence CTGAGTTGCCATTCAAAGACTCAAAGGAGTGAATCGTACACATCAATCATGGGGTTGGCTTGGCCACCACCCTGCTGGAACACT

CircID chr10:79614681|79614976
ORF Type ORF2
Protein Length 52
Nucleotide Length 159
Protein Sequence MKYLGEWINERRKQSQWCGGWCECPLKSEVGCRFVHQLKVTRVTSEGGSRSP
Nucleotide Sequence ATGAAATATCTGGGTGAATGGATTAATGAAAGGAGAAAGCAGAGCCAGTGGTGTGGGGGGTGGTGTGAATGCCCACTGAAATCTGAAGTAGGGTGCAGATTTGTTCATCAGTTGAAAGTTACTCGGGTCACATCTGAAGGCGGCTCTAGGTCACCCTAG

CircID chr10:79614681|79614976
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MKAALGHPRGLGWLSSGQGAELPFKDSKE
Nucleotide Sequence CTGAAGGCGGCTCTAGGTCACCCTAGAGGCCTAGGCTGGCTGTCTTCAGGTCAGGGGGCTGAGTTGCCATTCAAAGACTCAAAGGAGTGA

CircID chr10:79614681|79614976
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MMNKSAPYFRFQWAFTPPPTPLALLSPFINPFTQIFH
Nucleotide Sequence CTGATGAACAAATCTGCACCCTACTTCAGATTTCAGTGGGCATTCACACCACCCCCCACACCACTGGCTCTGCTTTCTCCTTTCATTAATCCATTCACCCAGATATTTCATTAA

CircID chr10:79614681|79614976
ORF Type ORF5
Protein Length 39
Nucleotide Length 117
Protein Sequence MHPTSDFSGHSHHPPHHWLCFLLSLIHSPRYFIKIITCQ
Nucleotide Sequence CTGCACCCTACTTCAGATTTCAGTGGGCATTCACACCACCCCCCACACCACTGGCTCTGCTTTCTCCTTTCATTAATCCATTCACCCAGATATTTCATTAAAATTATCACGTGCCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites