CircRNA Information

General Information
circRNA Basic Information
CircID chr10:80520754|80520978
Strand -
CircType exon
Host Gene ENSG00000108219.13;
Algorism CIRI2;
Sequence CACCCACCATGCCCCACGTAGCTGAAAGCTGCTTATCCCAATTGTCAACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCCTCTGCTTCTCTGCTTCAGAGGCCCAGGCTCGCCAGTTCTCTGACCTCTCCCATATGTCTGCTTAGGACTCTGCTGCAGCTGTCCTCACCAGCCTCCGGGGAATCCCACTACCCACAGGGCAGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:80520754|80520978 hsa-miR-107 0 0 1
chr10:80520754|80520978 hsa-miR-181c-5p 0 0 1
chr10:80520754|80520978 hsa-miR-181c-3p 0 0 1
chr10:80520754|80520978 hsa-miR-221-5p 0 0 1
chr10:80520754|80520978 hsa-miR-221-3p 0 0 1
chr10:80520754|80520978 hsa-miR-222-5p 0 0 1
chr10:80520754|80520978 hsa-miR-222-3p 0 0 1
chr10:80520754|80520978 hsa-miR-146a-5p 0 0 1
chr10:80520754|80520978 hsa-miR-146a-3p 0 0 1
chr10:80520754|80520978 hsa-miR-181d-5p 0 0 1
chr10:80520754|80520978 hsa-miR-181d-3p 0 0 1
chr10:80520754|80520978 hsa-miR-646 0 0 1
chr10:80520754|80520978 hsa-miR-661 0 0 1
chr10:80520754|80520978 hsa-miR-874-5p 0 0 1
chr10:80520754|80520978 hsa-miR-874-3p 0 0 1
chr10:80520754|80520978 hsa-miR-541-5p 0 0 1
chr10:80520754|80520978 hsa-miR-541-3p 0 0 1
chr10:80520754|80520978 hsa-miR-922 0 0 1
chr10:80520754|80520978 hsa-miR-1231 0 0 1
chr10:80520754|80520978 hsa-miR-1224-5p 0 0 1
chr10:80520754|80520978 hsa-miR-486-3p 0 0 1
chr10:80520754|80520978 hsa-miR-485-5p 0 0 1
chr10:80520754|80520978 hsa-miR-146b-3p 0 0 1
chr10:80520754|80520978 hsa-miR-1184 0 0 1
chr10:80520754|80520978 hsa-miR-654-5p 0 0 1
chr10:80520754|80520978 hsa-miR-769-3p 1 0 1
chr10:80520754|80520978 hsa-miR-146b-5p 0 0 1
chr10:80520754|80520978 hsa-miR-450b-3p 0 0 1
chr10:80520754|80520978 hsa-miR-103 0 0 1
chr10:80520754|80520978 hsa-miR-138 0 0 1
chr10:80520754|80520978 hsa-miR-181a 0 0 1
chr10:80520754|80520978 hsa-miR-181b 0 0 1
chr10:80520754|80520978 hsa-miR-219-1-3p 0 0 1
chr10:80520754|80520978 hsa-miR-198 1 0 0
chr10:80520754|80520978 hsa-miR-608 1 0 0
chr10:80520754|80520978 hsa-miR-658 1 0 0
chr10:80520754|80520978 hsa-miR-765 1 0 0
chr10:80520754|80520978 hsa-miR-936 1 0 0
chr10:80520754|80520978 hsa-miR-3131 1 0 0
chr10:80520754|80520978 hsa-miR-3132 1 0 0
chr10:80520754|80520978 hsa-miR-3154 1 0 0
chr10:80520754|80520978 hsa-miR-3166 1 0 0
chr10:80520754|80520978 hsa-miR-3185 1 0 0
chr10:80520754|80520978 hsa-miR-4298 1 0 0
chr10:80520754|80520978 hsa-miR-3916 1 0 0
chr10:80520754|80520978 hsa-miR-3919 0 1 0
chr10:80520754|80520978 hsa-miR-4498 1 0 0
chr10:80520754|80520978 hsa-miR-4516 1 0 0
chr10:80520754|80520978 hsa-miR-4654 1 0 0
chr10:80520754|80520978 hsa-miR-4688 1 0 0
chr10:80520754|80520978 hsa-miR-4710 0 1 0
chr10:80520754|80520978 hsa-miR-4751 1 0 0
chr10:80520754|80520978 hsa-miR-5698 1 0 0
chr10:80520754|80520978 hsa-miR-6086 1 0 0
chr10:80520754|80520978 hsa-miR-6125 1 0 0
chr10:80520754|80520978 hsa-miR-8085 1 0 0
chr10:80520754|80520978 hsa-miR-8089 1 0 0
chr10:80520754|80520978 hsa-miR-12127 0 1 0
chr10:80520754|80520978 hsa-miR-187-3p 0 1 0
chr10:80520754|80520978 hsa-miR-143-5p 0 1 0
chr10:80520754|80520978 hsa-miR-4435 1 0 0
chr10:80520754|80520978 hsa-miR-6861-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6825-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6894-5p 1 0 0
chr10:80520754|80520978 hsa-miR-1972 1 0 0
chr10:80520754|80520978 hsa-miR-6799-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6510-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6833-5p 1 0 0
chr10:80520754|80520978 hsa-miR-7114-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6089 1 0 0
chr10:80520754|80520978 hsa-miR-6873-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6880-5p 1 0 0
chr10:80520754|80520978 hsa-miR-4695-5p 1 0 0
chr10:80520754|80520978 hsa-miR-4722-5p 1 0 0
chr10:80520754|80520978 hsa-miR-7154-3p 1 0 0
chr10:80520754|80520978 hsa-miR-6890-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6820-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6759-5p 1 0 0
chr10:80520754|80520978 hsa-miR-197-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6871-5p 1 0 0
chr10:80520754|80520978 hsa-miR-3151-5p 0 1 0
chr10:80520754|80520978 hsa-miR-6793-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6796-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6770-5p 1 0 0
chr10:80520754|80520978 hsa-miR-2467-3p 1 0 0
chr10:80520754|80520978 hsa-miR-7855-5p 0 1 0
chr10:80520754|80520978 hsa-miR-615-3p 0 1 0
chr10:80520754|80520978 hsa-miR-939-3p 0 1 0
chr10:80520754|80520978 hsa-miR-1226-5p 1 0 0
chr10:80520754|80520978 hsa-miR-1229-5p 1 0 0
chr10:80520754|80520978 hsa-miR-4640-5p 1 0 0
chr10:80520754|80520978 hsa-miR-30c-2-3p 0 1 0
chr10:80520754|80520978 hsa-miR-885-3p 1 0 0
chr10:80520754|80520978 hsa-miR-6771-5p 1 0 0
chr10:80520754|80520978 hsa-miR-4690-5p 1 0 0
chr10:80520754|80520978 hsa-miR-877-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6847-5p 1 0 0
chr10:80520754|80520978 hsa-miR-4743-5p 1 0 0
chr10:80520754|80520978 hsa-miR-149-3p 1 0 0
chr10:80520754|80520978 hsa-miR-3616-3p 1 0 0
chr10:80520754|80520978 hsa-miR-6824-5p 1 0 0
chr10:80520754|80520978 hsa-miR-3925-5p 0 1 0
chr10:80520754|80520978 hsa-miR-516b-5p 0 1 0
chr10:80520754|80520978 hsa-miR-3922-5p 1 0 0
chr10:80520754|80520978 hsa-miR-423-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6499-3p 0 1 0
chr10:80520754|80520978 hsa-miR-6801-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6792-5p 1 0 0
chr10:80520754|80520978 hsa-miR-5089-5p 0 1 0
chr10:80520754|80520978 hsa-miR-6767-5p 1 0 0
chr10:80520754|80520978 hsa-miR-506-5p 0 1 0
chr10:80520754|80520978 hsa-miR-6733-3p 0 1 0
chr10:80520754|80520978 hsa-miR-1233-5p 1 0 0
chr10:80520754|80520978 hsa-miR-4763-3p 1 0 0
chr10:80520754|80520978 hsa-miR-6778-5p 1 0 0
chr10:80520754|80520978 hsa-miR-5001-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6743-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6752-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6756-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6803-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6722-3p 1 0 0
chr10:80520754|80520978 hsa-miR-6751-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6779-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6780a-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6788-5p 1 0 0
chr10:80520754|80520978 hsa-miR-7111-5p 1 0 0
chr10:80520754|80520978 hsa-miR-4728-5p 1 0 0
chr10:80520754|80520978 hsa-miR-5196-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6780b-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6836-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6862-5p 0 1 0
chr10:80520754|80520978 hsa-miR-1237-5p 1 0 0
chr10:80520754|80520978 hsa-miR-1909-3p 1 0 0
chr10:80520754|80520978 hsa-miR-4649-5p 1 0 0
chr10:80520754|80520978 hsa-miR-4685-5p 1 0 0
chr10:80520754|80520978 hsa-miR-4726-5p 1 0 0
chr10:80520754|80520978 hsa-miR-4745-5p 0 1 0
chr10:80520754|80520978 hsa-miR-6729-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6735-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6846-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6848-5p 1 0 0
chr10:80520754|80520978 hsa-miR-4723-5p 1 0 0
chr10:80520754|80520978 hsa-miR-939-5p 1 0 0
chr10:80520754|80520978 hsa-miR-365a-5p 1 0 0
chr10:80520754|80520978 hsa-miR-365b-5p 1 0 0
chr10:80520754|80520978 hsa-miR-30c-1-3p 0 1 0
chr10:80520754|80520978 hsa-miR-6731-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6856-5p 1 0 0
chr10:80520754|80520978 hsa-miR-1914-3p 1 0 0
chr10:80520754|80520978 hsa-miR-4665-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6736-5p 1 0 0
chr10:80520754|80520978 hsa-miR-10398-3p 1 0 0
chr10:80520754|80520978 hsa-miR-3679-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6891-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6785-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6849-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6718-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6859-5p 1 0 0
chr10:80520754|80520978 hsa-miR-6884-5p 1 0 0
chr10:80520754|80520978 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:80520754|80520978
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MKAAYPNCQLWPSSASVAPDTAPPECPLLLCFRGPGSPVL
Nucleotide Sequence CTGAAAGCTGCTTATCCCAATTGTCAACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGAATGTCCTCTGCTTCTCTGCTTCAGAGGCCCAGGCTCGCCAGTTCTCTGA
CircID chr10:80520754|80520978
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MHLLNVLCFSASEAQARQFSDLSHMSA
Nucleotide Sequence CTGCACCTCCTGAATGTCCTCTGCTTCTCTGCTTCAGAGGCCCAGGCTCGCCAGTTCTCTGACCTCTCCCATATGTCTGCTTAG
CircID chr10:80520754|80520978
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MPHVAESCLSQLSTLAFFSLCSTRHCTS
Nucleotide Sequence ATGCCCCACGTAGCTGAAAGCTGCTTATCCCAATTGTCAACTCTGGCCTTCTTCAGCCTCTGTAGCACCAGACACTGCACCTCCTGA
CircID chr10:80520754|80520978
ORF Type ORF4
Protein Length 43
Nucleotide Length 129
Protein Sequence MSSASLLQRPRLASSLTSPICLLRTLLQLSSPASGESHYPQGR
Nucleotide Sequence ATGTCCTCTGCTTCTCTGCTTCAGAGGCCCAGGCTCGCCAGTTCTCTGACCTCTCCCATATGTCTGCTTAGGACTCTGCTGCAGCTGTCCTCACCAGCCTCCGGGGAATCCCACTACCCACAGGGCAGG
CircID chr10:80520754|80520978
ORF Type ORF5
Protein Length 44
Nucleotide Length 135
Protein Sequence MQQSPKQTYGRGQRTGEPGPLKQRSRGHSGGAVSGATEAEEGQS
Nucleotide Sequence CTGCAGCAGAGTCCTAAGCAGACATATGGGAGAGGTCAGAGAACTGGCGAGCCTGGGCCTCTGAAGCAGAGAAGCAGAGGACATTCAGGAGGTGCAGTGTCTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTTGA
CircID chr10:80520754|80520978
ORF Type ORF6
Protein Length 26
Nucleotide Length 78
Protein Sequence MVLQRLKKARVDNWDKQLSATWGMVG
Nucleotide Sequence CTGGTGCTACAGAGGCTGAAGAAGGCCAGAGTTGACAATTGGGATAAGCAGCTTTCAGCTACGTGGGGCATGGTGGGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab