CircNet

General Information

circRNA Basic Information

CircID	chr10:88939515\|88939642
Strand	+
CircType	exon
Host Gene	ENSG00000180139.11;
Algorism	CIRI2;
Sequence	TTTGAAAATGAGATGGCCACTGCCGCATCCTCATCCTCCCTTGAGAAGAGTTACGAGTTGCCTGATGGGCAAGTGATCACCATCGGAAATGAACGTTTCCGCTGCCCAGAGACCCTGTTCCAGCCATC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr10:88939515\|88939642	hsa-miR-34a-5p	0	0	1
chr10:88939515\|88939642	hsa-miR-34a-3p	0	0	1
chr10:88939515\|88939642	hsa-miR-326	0	0	1
chr10:88939515\|88939642	hsa-miR-449a	0	0	1
chr10:88939515\|88939642	hsa-miR-579-5p	0	0	1
chr10:88939515\|88939642	hsa-miR-579-3p	0	0	1
chr10:88939515\|88939642	hsa-miR-593-5p	0	0	1
chr10:88939515\|88939642	hsa-miR-593-3p	0	0	1
chr10:88939515\|88939642	hsa-miR-607	0	0	1
chr10:88939515\|88939642	hsa-miR-612	0	0	1
chr10:88939515\|88939642	hsa-miR-618	0	0	1
chr10:88939515\|88939642	hsa-miR-449b-5p	0	0	1
chr10:88939515\|88939642	hsa-miR-449b-3p	0	0	1
chr10:88939515\|88939642	hsa-miR-942-5p	0	0	1
chr10:88939515\|88939642	hsa-miR-942-3p	0	0	1
chr10:88939515\|88939642	hsa-miR-1182	0	1	1
chr10:88939515\|88939642	hsa-miR-1305	0	0	1
chr10:88939515\|88939642	hsa-miR-1255a	0	0	1
chr10:88939515\|88939642	hsa-miR-513c-5p	0	0	1
chr10:88939515\|88939642	hsa-miR-513c-3p	0	0	1
chr10:88939515\|88939642	hsa-miR-1321	0	1	1
chr10:88939515\|88939642	hsa-miR-885-3p	0	0	1
chr10:88939515\|88939642	hsa-miR-330-5p	0	0	1
chr10:88939515\|88939642	hsa-miR-34c-5p	0	1	1
chr10:88939515\|88939642	hsa-miR-1255b	0	0	1
chr10:88939515\|88939642	hsa-miR-1285	0	0	1
chr10:88939515\|88939642	hsa-miR-1185	0	0	1
chr10:88939515\|88939642	hsa-miR-4430	1	0	0
chr10:88939515\|88939642	hsa-miR-3135b	1	0	0
chr10:88939515\|88939642	hsa-miR-4505	1	0	0
chr10:88939515\|88939642	hsa-miR-4525	0	1	0
chr10:88939515\|88939642	hsa-miR-4739	1	1	0
chr10:88939515\|88939642	hsa-miR-5787	1	0	0
chr10:88939515\|88939642	hsa-miR-6745	1	0	0
chr10:88939515\|88939642	hsa-miR-6860	1	1	0
chr10:88939515\|88939642	hsa-miR-7106-5p	0	1	0
chr10:88939515\|88939642	hsa-miR-6894-5p	1	1	0
chr10:88939515\|88939642	hsa-miR-6842-3p	1	0	0
chr10:88939515\|88939642	hsa-miR-7845-5p	1	0	0
chr10:88939515\|88939642	hsa-miR-503-5p	0	1	0
chr10:88939515\|88939642	hsa-miR-10400-5p	1	0	0
chr10:88939515\|88939642	hsa-miR-1207-5p	1	0	0
chr10:88939515\|88939642	hsa-miR-6778-5p	1	0	0
chr10:88939515\|88939642	hsa-miR-5001-5p	1	0	0
chr10:88939515\|88939642	hsa-miR-1249-5p	1	0	0
chr10:88939515\|88939642	hsa-miR-4728-5p	1	0	0
chr10:88939515\|88939642	hsa-miR-5189-5p	0	1	0
chr10:88939515\|88939642	hsa-miR-4749-5p	1	0	0
chr10:88939515\|88939642	hsa-miR-6795-5p	1	0	0
chr10:88939515\|88939642	hsa-miR-6848-5p	1	0	0
chr10:88939515\|88939642	hsa-miR-3187-5p	0	1	0
chr10:88939515\|88939642	hsa-miR-6785-5p	1	1	0
chr10:88939515\|88939642	hsa-miR-1255b-5p	0	1	0
chr10:88939515\|88939642	hsa-miR-514b-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr10:88939515\|88939642
ORF Type	ORF1
Protein Length	38
Nucleotide Length	114
Protein Sequence	MATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQP
Nucleotide Sequence	ATGGCCACTGCCGCATCCTCATCCTCCCTTGAGAAGAGTTACGAGTTGCCTGATGGGCAAGTGATCACCATCGGAAATGAACGTTTCCGCTGCCCAGAGACCCTGTTCCAGCCA

CircID	chr10:88939515\|88939642
ORF Type	ORF2
Protein Length	30
Nucleotide Length	93
Protein Sequence	MEQGLWAAETFISDGDHLPIRQLVTLLKGG
Nucleotide Sequence	CTGGAACAGGGTCTCTGGGCAGCGGAAACGTTCATTTCCGATGGTGATCACTTGCCCATCAGGCAACTCGTAACTCTTCTCAAGGGAGGATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information