CircRNA Information

General Information
circRNA Basic Information
CircID chr10:93449455|93449647
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence ATTCTAGCAGGTTCTGGTCCCACTCTCTTGCACTGGAAACTATTCTAGCTTTTTAAGTTTCTGTCGCATATCTCAGCTGCGAACTATTATATGATTATTTATTCCCCACCCCAACTCCCAAAAGCCAGTTTTATTTCCCATATTTCAAAGTTTTGGGGAAGGGGAGGAGAGGGGAGGGCCTCACACTAGCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:93449455|93449647 hsa-miR-148a-5p 0 0 1
chr10:93449455|93449647 hsa-miR-148a-3p 0 0 1
chr10:93449455|93449647 hsa-miR-130a-5p 0 0 1
chr10:93449455|93449647 hsa-miR-130a-3p 0 0 1
chr10:93449455|93449647 hsa-miR-152-5p 0 0 1
chr10:93449455|93449647 hsa-miR-152-3p 0 0 1
chr10:93449455|93449647 hsa-miR-301a-5p 0 0 1
chr10:93449455|93449647 hsa-miR-301a-3p 0 0 1
chr10:93449455|93449647 hsa-miR-130b-5p 0 0 1
chr10:93449455|93449647 hsa-miR-130b-3p 0 0 1
chr10:93449455|93449647 hsa-miR-374a-5p 0 0 1
chr10:93449455|93449647 hsa-miR-374a-3p 0 0 1
chr10:93449455|93449647 hsa-miR-148b-5p 0 0 1
chr10:93449455|93449647 hsa-miR-148b-3p 0 0 1
chr10:93449455|93449647 hsa-miR-571 0 0 1
chr10:93449455|93449647 hsa-miR-608 1 0 1
chr10:93449455|93449647 hsa-miR-633 0 0 1
chr10:93449455|93449647 hsa-miR-648 0 0 1
chr10:93449455|93449647 hsa-miR-1323 0 0 1
chr10:93449455|93449647 hsa-miR-454-5p 0 0 1
chr10:93449455|93449647 hsa-miR-454-3p 0 0 1
chr10:93449455|93449647 hsa-miR-892b 0 1 1
chr10:93449455|93449647 hsa-miR-374b-5p 0 0 1
chr10:93449455|93449647 hsa-miR-374b-3p 0 0 1
chr10:93449455|93449647 hsa-miR-301b-5p 0 0 1
chr10:93449455|93449647 hsa-miR-301b-3p 0 0 1
chr10:93449455|93449647 hsa-miR-548e-5p 0 0 1
chr10:93449455|93449647 hsa-miR-548e-3p 0 0 1
chr10:93449455|93449647 hsa-miR-1294 0 0 1
chr10:93449455|93449647 hsa-miR-548o-3p 0 0 1
chr10:93449455|93449647 hsa-miR-1825 0 0 1
chr10:93449455|93449647 hsa-miR-548o 0 0 1
chr10:93449455|93449647 hsa-miR-145-5p 0 0 1
chr10:93449455|93449647 hsa-miR-491-5p 0 0 1
chr10:93449455|93449647 hsa-miR-199a-5p 0 0 1
chr10:93449455|93449647 hsa-miR-199b-5p 0 0 1
chr10:93449455|93449647 hsa-miR-342-5p 0 0 1
chr10:93449455|93449647 hsa-miR-548a-3p 0 0 1
chr10:93449455|93449647 hsa-miR-369-3p 0 0 1
chr10:93449455|93449647 hsa-miR-548f 0 0 1
chr10:93449455|93449647 hsa-miR-203 0 0 1
chr10:93449455|93449647 hsa-miR-762 1 0 0
chr10:93449455|93449647 hsa-miR-2110 1 0 0
chr10:93449455|93449647 hsa-miR-4279 0 1 0
chr10:93449455|93449647 hsa-miR-4290 0 1 0
chr10:93449455|93449647 hsa-miR-4507 1 0 0
chr10:93449455|93449647 hsa-miR-4525 1 0 0
chr10:93449455|93449647 hsa-miR-4651 1 0 0
chr10:93449455|93449647 hsa-miR-5093 1 1 0
chr10:93449455|93449647 hsa-miR-5572 0 1 0
chr10:93449455|93449647 hsa-miR-5698 1 0 0
chr10:93449455|93449647 hsa-miR-5787 1 0 0
chr10:93449455|93449647 hsa-miR-6749-3p 0 1 0
chr10:93449455|93449647 hsa-miR-92a-2-5p 1 1 0
chr10:93449455|93449647 hsa-miR-6747-5p 1 0 0
chr10:93449455|93449647 hsa-miR-6892-3p 0 1 0
chr10:93449455|93449647 hsa-miR-4722-5p 1 0 0
chr10:93449455|93449647 hsa-miR-7110-3p 0 1 0
chr10:93449455|93449647 hsa-miR-6845-3p 0 1 0
chr10:93449455|93449647 hsa-miR-6742-5p 1 0 0
chr10:93449455|93449647 hsa-miR-6871-5p 1 1 0
chr10:93449455|93449647 hsa-miR-877-3p 0 1 0
chr10:93449455|93449647 hsa-miR-6782-5p 1 0 0
chr10:93449455|93449647 hsa-miR-6786-5p 1 0 0
chr10:93449455|93449647 hsa-miR-4693-3p 0 1 0
chr10:93449455|93449647 hsa-miR-7111-3p 0 1 0
chr10:93449455|93449647 hsa-miR-149-3p 1 0 0
chr10:93449455|93449647 hsa-miR-3162-5p 1 0 0
chr10:93449455|93449647 hsa-miR-654-5p 1 0 0
chr10:93449455|93449647 hsa-miR-6887-3p 0 1 0
chr10:93449455|93449647 hsa-miR-3140-3p 0 1 0
chr10:93449455|93449647 hsa-miR-6826-3p 0 1 0
chr10:93449455|93449647 hsa-miR-6886-3p 0 1 0
chr10:93449455|93449647 hsa-miR-328-3p 0 1 0
chr10:93449455|93449647 hsa-miR-4649-3p 0 1 0
chr10:93449455|93449647 hsa-miR-6734-3p 0 1 0
chr10:93449455|93449647 hsa-miR-1244 0 1 0
chr10:93449455|93449647 hsa-miR-1233-5p 1 0 0
chr10:93449455|93449647 hsa-miR-6769b-5p 1 0 0
chr10:93449455|93449647 hsa-miR-6812-5p 1 1 0
chr10:93449455|93449647 hsa-miR-6816-5p 1 0 0
chr10:93449455|93449647 hsa-miR-6737-5p 1 0 0
chr10:93449455|93449647 hsa-miR-6756-5p 1 1 0
chr10:93449455|93449647 hsa-miR-6803-5p 1 0 0
chr10:93449455|93449647 hsa-miR-6819-5p 1 1 0
chr10:93449455|93449647 hsa-miR-6763-5p 1 0 0
chr10:93449455|93449647 hsa-miR-3127-3p 0 1 0
chr10:93449455|93449647 hsa-miR-320a-5p 0 1 0
chr10:93449455|93449647 hsa-miR-3620-5p 1 0 0
chr10:93449455|93449647 hsa-miR-4728-5p 1 0 0
chr10:93449455|93449647 hsa-miR-6780b-5p 1 0 0
chr10:93449455|93449647 hsa-miR-4745-5p 1 1 0
chr10:93449455|93449647 hsa-miR-4758-5p 1 0 0
chr10:93449455|93449647 hsa-miR-4665-5p 1 0 0
chr10:93449455|93449647 hsa-miR-6855-5p 1 0 0
chr10:93449455|93449647 hsa-miR-6766-5p 1 1 0
chr10:93449455|93449647 hsa-miR-6756-3p 0 1 0
chr10:93449455|93449647 hsa-miR-4723-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr10:93449455|93449647
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence MSHISAANYYMIIYSPPQLPKASFISHISKFWGRGGEGRASH
Nucleotide Sequence CTGTCGCATATCTCAGCTGCGAACTATTATATGATTATTTATTCCCCACCCCAACTCCCAAAAGCCAGTTTTATTTCCCATATTTCAAAGTTTTGGGGAAGGGGAGGAGAGGGGAGGGCCTCACACTAG
CircID chr10:93449455|93449647
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MVPLSCTGNYSSFLSFCRISQLRTII
Nucleotide Sequence CTGGTCCCACTCTCTTGCACTGGAAACTATTCTAGCTTTTTAAGTTTCTGTCGCATATCTCAGCTGCGAACTATTATATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab