CircRNA Information

General Information
circRNA Basic Information
CircID chr10:95237963|95238080
Strand +
CircType exon
Host Gene ENSG00000107438.7;
Algorism CIRI2;
Sequence CGCCACCCTGAGTGTTATGTGTGCACTGACTGTGGCACCAACCTGAAACAGAAGGGCCATTTCTTTGTGGAGGATCAAATCTACTGTGAGAAGCATGCCCGGGAGCGAGTCACACCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:95237963|95238080 hsa-miR-27a-5p 0 0 1
chr10:95237963|95238080 hsa-miR-27a-3p 0 0 1
chr10:95237963|95238080 hsa-miR-148a-5p 0 0 1
chr10:95237963|95238080 hsa-miR-148a-3p 0 0 1
chr10:95237963|95238080 hsa-miR-27b-5p 0 0 1
chr10:95237963|95238080 hsa-miR-27b-3p 0 0 1
chr10:95237963|95238080 hsa-miR-141-5p 0 0 1
chr10:95237963|95238080 hsa-miR-141-3p 0 0 1
chr10:95237963|95238080 hsa-miR-152-5p 0 0 1
chr10:95237963|95238080 hsa-miR-152-3p 0 0 1
chr10:95237963|95238080 hsa-miR-134-5p 0 0 1
chr10:95237963|95238080 hsa-miR-134-3p 0 0 1
chr10:95237963|95238080 hsa-miR-200a-5p 0 0 1
chr10:95237963|95238080 hsa-miR-200a-3p 0 0 1
chr10:95237963|95238080 hsa-miR-328-5p 0 0 1
chr10:95237963|95238080 hsa-miR-328-3p 0 0 1
chr10:95237963|95238080 hsa-miR-148b-5p 0 0 1
chr10:95237963|95238080 hsa-miR-148b-3p 0 0 1
chr10:95237963|95238080 hsa-miR-510-5p 0 0 1
chr10:95237963|95238080 hsa-miR-510-3p 0 0 1
chr10:95237963|95238080 hsa-miR-640 0 0 1
chr10:95237963|95238080 hsa-miR-936 0 0 1
chr10:95237963|95238080 hsa-miR-1227-5p 0 0 1
chr10:95237963|95238080 hsa-miR-1227-3p 0 0 1
chr10:95237963|95238080 hsa-miR-1229-5p 0 0 1
chr10:95237963|95238080 hsa-miR-1229-3p 0 0 1
chr10:95237963|95238080 hsa-miR-1237-5p 0 0 1
chr10:95237963|95238080 hsa-miR-1237-3p 0 0 1
chr10:95237963|95238080 hsa-miR-1291 0 0 1
chr10:95237963|95238080 hsa-miR-1266-5p 0 0 1
chr10:95237963|95238080 hsa-miR-1266-3p 0 0 1
chr10:95237963|95238080 hsa-miR-342-3p 0 0 1
chr10:95237963|95238080 hsa-miR-128 0 0 1
chr10:95237963|95238080 hsa-miR-1826 0 0 1
chr10:95237963|95238080 hsa-miR-612 1 0 0
chr10:95237963|95238080 hsa-miR-663b 1 0 0
chr10:95237963|95238080 hsa-miR-5008-5p 1 0 0
chr10:95237963|95238080 hsa-miR-7160-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr10:95237963|95238080
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MKQKGHFFVEDQIYCEKHARERVTP
Nucleotide Sequence CTGAAACAGAAGGGCCATTTCTTTGTGGAGGATCAAATCTACTGTGAGAAGCATGCCCGGGAGCGAGTCACACCA

CircID chr10:95237963|95238080
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MLLTVDLILHKEMALLFQVGATVSAHITLRVA
Nucleotide Sequence ATGCTTCTCACAGTAGATTTGATCCTCCACAAAGAAATGGCCCTTCTGTTTCAGGTTGGTGCCACAGTCAGTGCACACATAACACTCAGGGTGGCG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites