CircNet

General Information

circRNA Basic Information

CircID	chr10:95397220\|95414862
Strand	-
CircType	exon
Host Gene	ENSG00000095637.21;
Algorism	CIRI2;find_circ;DCC;
Sequence	GATGCCACTTCCTCCAGTGCAGCCCAGCCGGAGGATTCCAGTCCTCTACTAAATGAAGTTTCTTCTTCCCTTATTGGAACTGATTCCCAAGCCTTTCCATCAGTTAGCAAGCCTTCATCCGCCTATCCCTCCACAACGATTGTCAATCCTACTATTGTGCTCTTGCAACACAATCGAGAACAGCAAAAACGACTCAGTAGCCTTTCAGATCCTGTCTCAGAAAGAAGAGTGGGAGAGCAGGACTCAGCACCAACCCAGGAAAAACCCACCTCACCTGGCAAGGCTATTGAAAAAAGAGCAAAGGATGACAGTAGGCGGGTGGTGAAGAGCACTCAGGACTTAAGCGATGTTTCCATGGATGAAGTGGGCATCCCACTCCGGAACACTGAGAGATCAAAAGACTGGTACAAGACTATGTTTAAACAGATCCACAAACTGAACAGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr10:95397220\|95414862	hsa-miR-150-3p	0	1	1
chr10:95397220\|95414862	hsa-miR-222-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr10:95397220\|95414862
ORF Type	ORF1
Protein Length	91
Nucleotide Length	273
Protein Sequence	MKFLLPLLELIPKPFHQLASLHPPIPPQRLSILLLCSCNTIENSKNDSVAFQILSQKEEWESRTQHQPRKNPPHLARLLKKEQRMTVGGW*
Nucleotide Sequence	ATGAAGTTTCTTCTTCCCTTATTGGAACTGATTCCCAAGCCTTTCCATCAGTTAGCAAGCCTTCATCCGCCTATCCCTCCACAACGATTGTCAATCCTACTATTGTGCTCTTGCAACACAATCGAGAACAGCAAAAACGACTCAGTAGCCTTTCAGATCCTGTCTCAGAAAGAAGAGTGGGAGAGCAGGACTCAGCACCAACCCAGGAAAAACCCACCTCACCTGGCAAGGCTATTGAAAAAAGAGCAAAGGATGACAGTAGGCGGGTGGTGA

CircID	chr10:95397220\|95414862
ORF Type	ORF2
Protein Length	96
Nucleotide Length	288
Protein Sequence	VLLQHNREQQKRLSSLSDPVSERRVGEQDSAPTQEKPTSPGKAIEKRAKDDSRRVVKSTQDLSDVSMDEVGIPLRNTERSKDWYKTMFKQIHKLNR
Nucleotide Sequence	GTGCTCTTGCAACACAATCGAGAACAGCAAAAACGACTCAGTAGCCTTTCAGATCCTGTCTCAGAAAGAAGAGTGGGAGAGCAGGACTCAGCACCAACCCAGGAAAAACCCACCTCACCTGGCAAGGCTATTGAAAAAAGAGCAAAGGATGACAGTAGGCGGGTGGTGAAGAGCACTCAGGACTTAAGCGATGTTTCCATGGATGAAGTGGGCATCCCACTCCGGAACACTGAGAGATCAAAAGACTGGTACAAGACTATGTTTAAACAGATCCACAAACTGAACAGA

CircID	chr10:95397220\|95414862
ORF Type	ORF3
Protein Length	31
Nucleotide Length	93
Protein Sequence	MFPWMKWASHSGTLRDQKTGTRLCLNRSTN*
Nucleotide Sequence	ATGTTTCCATGGATGAAGTGGGCATCCCACTCCGGAACACTGAGAGATCAAAAGACTGGTACAAGACTATGTTTAAACAGATCCACAAACTGA

CircID	chr10:95397220\|95414862
ORF Type	ORF4
Protein Length	70
Nucleotide Length	210
Protein Sequence	VLFTTRLLSSFALFSIALPGEVGFSWVGAESCSPTLLSETGSERLLSRFCCSRLCCKSTIVGLTIVVEG*
Nucleotide Sequence	GTGCTCTTCACCACCCGCCTACTGTCATCCTTTGCTCTTTTTTCAATAGCCTTGCCAGGTGAGGTGGGTTTTTCCTGGGTTGGTGCTGAGTCCTGCTCTCCCACTCTTCTTTCTGAGACAGGATCTGAAAGGCTACTGAGTCGTTTTTGCTGTTCTCGATTGTGTTGCAAGAGCACAATAGTAGGATTGACAATCGTTGTGGAGGGATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr10:95397220\|95414862	U2AF2	8	2	4
chr10:95397220\|95414862	ELAVL1	0	1	1
chr10:95397220\|95414862	TAF15	1	0	0
chr10:95397220\|95414862	FUS	3	5	0
chr10:95397220\|95414862	SRSF1	0	0	1
chr10:95397220\|95414862	NOP58	0	1	2
chr10:95397220\|95414862	U2AF1	1	0	1
chr10:95397220\|95414862	NOP56	2	0	0
chr10:95397220\|95414862	RBM10	1	0	0
chr10:95397220\|95414862	PTBP1	0	13	0
chr10:95397220\|95414862	HNRNPC	1	2	0
chr10:95397220\|95414862	TRA2A	0	0	1
chr10:95397220\|95414862	DHX9	0	1	0
chr10:95397220\|95414862	KHSRP	1	0	0
chr10:95397220\|95414862	LIN28B	0	1	0
chr10:95397220\|95414862	IGF2BP1	0	0	1
chr10:95397220\|95414862	IGF2BP2	0	0	1
chr10:95397220\|95414862	TARDBP	1	1	0
chr10:95397220\|95414862	BUD13	1	1	2
chr10:95397220\|95414862	RBFOX2	2	0	0
chr10:95397220\|95414862	TIA1	0	1	0
chr10:95397220\|95414862	TARBP2	0	1	0
chr10:95397220\|95414862	RBM22	0	1	0
chr10:95397220\|95414862	HNRNPK	3	0	0
chr10:95397220\|95414862	EIF4A3	0	1	3
chr10:95397220\|95414862	FBL	0	1	2

CircRNA Information