CircRNA Information

General Information
circRNA Basic Information
CircID chr10:97356883|97357044
Strand -
CircType exon
Host Gene ENSG00000052749.12;
Algorism CIRI2;
Sequence ATTCCCATCTCCAGGCACCAGGGATGTCTCTGAAGGGTGATTCCATTTGGAGTTTCCAAAATCCAGGACTTCTGAGAGCCAAGCCCTAGTTCCAAGTCATCCTGAGTCCAGGCTCTGCCAGAATCTTGAGCACCTGGAGCTGGTGGCAAGGCAGCCTGGGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:97356883|97357044 hsa-miR-422a 0 1 1
chr10:97356883|97357044 hsa-miR-510-5p 0 0 1
chr10:97356883|97357044 hsa-miR-510-3p 0 0 1
chr10:97356883|97357044 hsa-miR-620 0 0 1
chr10:97356883|97357044 hsa-miR-661 0 0 1
chr10:97356883|97357044 hsa-miR-890 0 0 1
chr10:97356883|97357044 hsa-miR-760 0 0 1
chr10:97356883|97357044 hsa-miR-1226-5p 0 0 1
chr10:97356883|97357044 hsa-miR-1226-3p 0 0 1
chr10:97356883|97357044 hsa-miR-1290 0 0 1
chr10:97356883|97357044 hsa-miR-1270 0 0 1
chr10:97356883|97357044 hsa-miR-361-3p 0 1 1
chr10:97356883|97357044 hsa-miR-876-5p 0 0 1
chr10:97356883|97357044 hsa-miR-550 0 0 1
chr10:97356883|97357044 hsa-miR-378 0 0 1
chr10:97356883|97357044 hsa-miR-1254 0 0 1
chr10:97356883|97357044 hsa-miR-764 0 1 0
chr10:97356883|97357044 hsa-miR-378c 0 1 0
chr10:97356883|97357044 hsa-miR-3907 0 1 0
chr10:97356883|97357044 hsa-miR-378e 0 1 0
chr10:97356883|97357044 hsa-miR-378h 0 1 0
chr10:97356883|97357044 hsa-miR-378i 0 1 0
chr10:97356883|97357044 hsa-miR-378j 0 1 0
chr10:97356883|97357044 hsa-miR-8059 0 1 0
chr10:97356883|97357044 hsa-miR-593-5p 1 0 0
chr10:97356883|97357044 hsa-miR-770-5p 1 0 0
chr10:97356883|97357044 hsa-miR-432-5p 0 1 0
chr10:97356883|97357044 hsa-miR-1915-5p 0 1 0
chr10:97356883|97357044 hsa-miR-6514-5p 0 1 0
chr10:97356883|97357044 hsa-miR-6882-3p 0 1 0
chr10:97356883|97357044 hsa-miR-4715-3p 0 1 0
chr10:97356883|97357044 hsa-miR-3690 0 1 0
chr10:97356883|97357044 hsa-miR-7846-3p 1 0 0
chr10:97356883|97357044 hsa-miR-3158-3p 0 1 0
chr10:97356883|97357044 hsa-miR-508-5p 0 1 0
chr10:97356883|97357044 hsa-miR-519d-5p 0 1 0
chr10:97356883|97357044 hsa-miR-6868-5p 0 1 0
chr10:97356883|97357044 hsa-miR-520f-5p 0 1 0
chr10:97356883|97357044 hsa-miR-4763-3p 1 0 0
chr10:97356883|97357044 hsa-miR-6836-5p 0 1 0
chr10:97356883|97357044 hsa-miR-3116 0 1 0
chr10:97356883|97357044 hsa-miR-378a-3p 0 1 0
chr10:97356883|97357044 hsa-miR-362-5p 0 1 0
chr10:97356883|97357044 hsa-miR-378d 0 1 0
chr10:97356883|97357044 hsa-miR-6839-5p 0 1 0
chr10:97356883|97357044 hsa-miR-519e-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr10:97356883|97357044
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MEFPKSRTSESQALVPSHPESRLCQNLEHLELVARQPG
Nucleotide Sequence TTGGAGTTTCCAAAATCCAGGACTTCTGAGAGCCAAGCCCTAGTTCCAAGTCATCCTGAGTCCAGGCTCTGCCAGAATCTTGAGCACCTGGAGCTGGTGGCAAGGCAGCCTGGG

CircID chr10:97356883|97357044
ORF Type ORF2
Protein Length 49
Nucleotide Length 147
Protein Sequence MPPAPGAQDSGRAWTQDDLELGLGSQKSWILETPNGITLQRHPWCLEMG
Nucleotide Sequence TTGCCACCAGCTCCAGGTGCTCAAGATTCTGGCAGAGCCTGGACTCAGGATGACTTGGAACTAGGGCTTGGCTCTCAGAAGTCCTGGATTTTGGAAACTCCAAATGGAATCACCCTTCAGAGACATCCCTGGTGCCTGGAGATGGGA

CircID chr10:97356883|97357044
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MALRSPGFWKLQMESPFRDIPGAWRWE
Nucleotide Sequence TTGGCTCTCAGAAGTCCTGGATTTTGGAAACTCCAAATGGAATCACCCTTCAGAGACATCCCTGGTGCCTGGAGATGGGAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites