CircRNA Information

General Information
circRNA Basic Information
CircID chr11:101032461|101032681
Strand -
CircType exon
Host Gene ENSG00000082175.13;
Algorism CIRI2;
Sequence CTGGCTTTCTTCTTCAGTCTCATCATCCATCCCCACCCCACATTCTCTCTCCCCATCAGGTTTGTGCAAATGTTGTTTGGGATACTCTTCTCTCTTTGGAATCCCTCCTGTTTGGAATACTCTTCTCTTCTTGCCTTTGGCATCTCCTCACCACGCACGTTCTGCTAATTCCTAAACTGCTTATAGATTGTGGCTTAGCTTTGACTTTTTTCAGGATGCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:101032461|101032681 hsa-miR-31-5p 0 0 1
chr11:101032461|101032681 hsa-miR-31-3p 0 0 1
chr11:101032461|101032681 hsa-miR-185-5p 0 0 1
chr11:101032461|101032681 hsa-miR-185-3p 0 0 1
chr11:101032461|101032681 hsa-miR-496 0 0 1
chr11:101032461|101032681 hsa-miR-507 0 0 1
chr11:101032461|101032681 hsa-miR-557 0 0 1
chr11:101032461|101032681 hsa-miR-608 1 1 1
chr11:101032461|101032681 hsa-miR-651-5p 0 0 1
chr11:101032461|101032681 hsa-miR-651-3p 0 0 1
chr11:101032461|101032681 hsa-miR-939-5p 0 0 1
chr11:101032461|101032681 hsa-miR-939-3p 0 0 1
chr11:101032461|101032681 hsa-miR-1253 0 0 1
chr11:101032461|101032681 hsa-miR-1255a 0 0 1
chr11:101032461|101032681 hsa-miR-1272 0 0 1
chr11:101032461|101032681 hsa-miR-491-5p 0 0 1
chr11:101032461|101032681 hsa-miR-299-3p 0 0 1
chr11:101032461|101032681 hsa-miR-330-3p 0 0 1
chr11:101032461|101032681 hsa-miR-342-5p 0 0 1
chr11:101032461|101032681 hsa-miR-1255b 0 0 1
chr11:101032461|101032681 hsa-miR-762 1 0 0
chr11:101032461|101032681 hsa-miR-1268a 1 0 0
chr11:101032461|101032681 hsa-miR-3170 1 0 0
chr11:101032461|101032681 hsa-miR-3175 1 1 0
chr11:101032461|101032681 hsa-miR-3185 0 1 0
chr11:101032461|101032681 hsa-miR-4298 1 0 0
chr11:101032461|101032681 hsa-miR-4311 0 1 0
chr11:101032461|101032681 hsa-miR-4271 1 0 0
chr11:101032461|101032681 hsa-miR-1268b 1 0 0
chr11:101032461|101032681 hsa-miR-4450 1 0 0
chr11:101032461|101032681 hsa-miR-4499 0 1 0
chr11:101032461|101032681 hsa-miR-4644 1 0 0
chr11:101032461|101032681 hsa-miR-4651 1 1 0
chr11:101032461|101032681 hsa-miR-4658 1 0 0
chr11:101032461|101032681 hsa-miR-4663 1 0 0
chr11:101032461|101032681 hsa-miR-4689 1 1 0
chr11:101032461|101032681 hsa-miR-4706 1 0 0
chr11:101032461|101032681 hsa-miR-4739 1 0 0
chr11:101032461|101032681 hsa-miR-4779 0 1 0
chr11:101032461|101032681 hsa-miR-4784 1 1 0
chr11:101032461|101032681 hsa-miR-5192 1 1 0
chr11:101032461|101032681 hsa-miR-5194 1 0 0
chr11:101032461|101032681 hsa-miR-5739 1 1 0
chr11:101032461|101032681 hsa-miR-6088 1 0 0
chr11:101032461|101032681 hsa-miR-6090 1 0 0
chr11:101032461|101032681 hsa-miR-6127 1 0 0
chr11:101032461|101032681 hsa-miR-6133 1 0 0
chr11:101032461|101032681 hsa-miR-6165 1 0 0
chr11:101032461|101032681 hsa-miR-8085 1 1 0
chr11:101032461|101032681 hsa-miR-8089 0 1 0
chr11:101032461|101032681 hsa-miR-12119 1 0 0
chr11:101032461|101032681 hsa-miR-12121 1 0 0
chr11:101032461|101032681 hsa-miR-12128 1 0 0
chr11:101032461|101032681 hsa-miR-92a-2-5p 1 1 0
chr11:101032461|101032681 hsa-miR-6734-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6747-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6809-5p 1 1 0
chr11:101032461|101032681 hsa-miR-3150a-3p 1 1 0
chr11:101032461|101032681 hsa-miR-7106-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6894-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6857-5p 1 1 0
chr11:101032461|101032681 hsa-miR-6728-5p 1 0 0
chr11:101032461|101032681 hsa-miR-5187-5p 1 1 0
chr11:101032461|101032681 hsa-miR-4768-3p 1 0 0
chr11:101032461|101032681 hsa-miR-6757-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6867-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6746-5p 1 0 0
chr11:101032461|101032681 hsa-miR-4722-5p 1 0 0
chr11:101032461|101032681 hsa-miR-197-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6742-5p 1 1 0
chr11:101032461|101032681 hsa-miR-3605-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6716-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6796-5p 1 1 0
chr11:101032461|101032681 hsa-miR-6732-5p 1 0 0
chr11:101032461|101032681 hsa-miR-23a-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6760-5p 1 0 0
chr11:101032461|101032681 hsa-miR-2467-3p 1 0 0
chr11:101032461|101032681 hsa-miR-6782-5p 1 0 0
chr11:101032461|101032681 hsa-miR-3150b-3p 1 1 0
chr11:101032461|101032681 hsa-miR-6888-5p 1 1 0
chr11:101032461|101032681 hsa-miR-6821-5p 1 1 0
chr11:101032461|101032681 hsa-miR-7855-5p 0 1 0
chr11:101032461|101032681 hsa-miR-6850-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6786-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6835-5p 1 0 0
chr11:101032461|101032681 hsa-miR-7109-5p 1 0 0
chr11:101032461|101032681 hsa-miR-1226-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6740-5p 1 0 0
chr11:101032461|101032681 hsa-miR-3691-5p 1 1 0
chr11:101032461|101032681 hsa-miR-149-3p 1 0 0
chr11:101032461|101032681 hsa-miR-3162-5p 1 0 0
chr11:101032461|101032681 hsa-miR-873-3p 0 1 0
chr11:101032461|101032681 hsa-miR-5197-3p 0 1 0
chr11:101032461|101032681 hsa-miR-1207-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6769b-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6812-5p 1 1 0
chr11:101032461|101032681 hsa-miR-6865-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6870-5p 1 0 0
chr11:101032461|101032681 hsa-miR-1343-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6737-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6752-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6756-5p 1 1 0
chr11:101032461|101032681 hsa-miR-6769a-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6803-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6819-5p 1 1 0
chr11:101032461|101032681 hsa-miR-6842-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6851-5p 1 0 0
chr11:101032461|101032681 hsa-miR-7110-5p 1 0 0
chr11:101032461|101032681 hsa-miR-10401-5p 1 0 0
chr11:101032461|101032681 hsa-miR-1249-5p 1 1 0
chr11:101032461|101032681 hsa-miR-6751-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6763-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6779-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6797-5p 1 1 0
chr11:101032461|101032681 hsa-miR-6808-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6875-5p 1 0 0
chr11:101032461|101032681 hsa-miR-7111-5p 1 0 0
chr11:101032461|101032681 hsa-miR-4728-5p 1 0 0
chr11:101032461|101032681 hsa-miR-5196-5p 1 0 0
chr11:101032461|101032681 hsa-miR-4726-5p 1 0 0
chr11:101032461|101032681 hsa-miR-4745-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6738-5p 1 0 0
chr11:101032461|101032681 hsa-miR-675-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6795-5p 1 1 0
chr11:101032461|101032681 hsa-miR-6858-5p 1 1 0
chr11:101032461|101032681 hsa-miR-6883-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6887-5p 1 1 0
chr11:101032461|101032681 hsa-miR-4769-5p 1 0 0
chr11:101032461|101032681 hsa-miR-3085-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6731-5p 1 1 0
chr11:101032461|101032681 hsa-miR-6758-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6856-5p 1 1 0
chr11:101032461|101032681 hsa-miR-1914-3p 1 0 0
chr11:101032461|101032681 hsa-miR-6855-5p 1 0 0
chr11:101032461|101032681 hsa-miR-3679-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6891-5p 1 0 0
chr11:101032461|101032681 hsa-miR-6785-5p 1 1 0
chr11:101032461|101032681 hsa-miR-6790-5p 1 0 0
chr11:101032461|101032681 hsa-miR-4781-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:101032461|101032681
ORF Type ORF1
Protein Length 55
Nucleotide Length 168
Protein Sequence LAFFFSLIIHPHPTFSLPIRFVQMLFGILFSLWNPSCLEYSSLLAFGISSPRTFC
Nucleotide Sequence CTGGCTTTCTTCTTCAGTCTCATCATCCATCCCCACCCCACATTCTCTCTCCCCATCAGGTTTGTGCAAATGTTGTTTGGGATACTCTTCTCTCTTTGGAATCCCTCCTGTTTGGAATACTCTTCTCTTCTTGCCTTTGGCATCTCCTCACCACGCACGTTCTGCTAA
CircID chr11:101032461|101032681
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MCKCCLGYSSLFGIPPVWNTLLFLPLASPHHARSANS
Nucleotide Sequence TTGTGCAAATGTTGTTTGGGATACTCTTCTCTCTTTGGAATCCCTCCTGTTTGGAATACTCTTCTCTTCTTGCCTTTGGCATCTCCTCACCACGCACGTTCTGCTAATTCCTAA
CircID chr11:101032461|101032681
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MESLLFGILFSSCLWHLLTTHVLLIPKLLIDCGLALTFFRMP
Nucleotide Sequence TTGGAATCCCTCCTGTTTGGAATACTCTTCTCTTCTTGCCTTTGGCATCTCCTCACCACGCACGTTCTGCTAATTCCTAAACTGCTTATAGATTGTGGCTTAGCTTTGACTTTTTTCAGGATGCCT
CircID chr11:101032461|101032681
ORF Type ORF4
Protein Length 47
Nucleotide Length 141
Protein Sequence MPKARREEYSKQEGFQREKSIPNNICTNLMGRENVGWGWMMRLKKKA
Nucleotide Sequence ATGCCAAAGGCAAGAAGAGAAGAGTATTCCAAACAGGAGGGATTCCAAAGAGAGAAGAGTATCCCAAACAACATTTGCACAAACCTGATGGGGAGAGAGAATGTGGGGTGGGGATGGATGATGAGACTGAAGAAGAAAGCC
CircID chr11:101032461|101032681
ORF Type ORF5
Protein Length 52
Nucleotide Length 159
Protein Sequence MKKVKAKPQSISSLGISRTCVVRRCQRQEEKSIPNRRDSKERRVSQTTFAQT
Nucleotide Sequence CTGAAAAAAGTCAAAGCTAAGCCACAATCTATAAGCAGTTTAGGAATTAGCAGAACGTGCGTGGTGAGGAGATGCCAAAGGCAAGAAGAGAAGAGTATTCCAAACAGGAGGGATTCCAAAGAGAGAAGAGTATCCCAAACAACATTTGCACAAACCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab