CircRNA Information

General Information
circRNA Basic Information
CircID chr11:102378015|102378145
Strand +
CircType exon
Host Gene ENSG00000110330.7;
Algorism CIRI2;
Sequence CCCTGCAAATAGGGCATTTTCTTAGAGAAGGGGCACATTCCTGGCATACTACCAGATGACCACAAGGAATAAATACAACAGAAACTTCTTTGTCCATACACACTTTACAAGTTCGTTCTTCTTGCAACCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:102378015|102378145 hsa-miR-17-5p 0 0 1
chr11:102378015|102378145 hsa-miR-17-3p 0 0 1
chr11:102378015|102378145 hsa-miR-20a-5p 0 0 1
chr11:102378015|102378145 hsa-miR-20a-3p 0 0 1
chr11:102378015|102378145 hsa-miR-93-5p 0 0 1
chr11:102378015|102378145 hsa-miR-93-3p 0 0 1
chr11:102378015|102378145 hsa-miR-106a-5p 0 0 1
chr11:102378015|102378145 hsa-miR-106a-3p 0 0 1
chr11:102378015|102378145 hsa-miR-206 0 0 1
chr11:102378015|102378145 hsa-miR-106b-5p 0 0 1
chr11:102378015|102378145 hsa-miR-106b-3p 0 0 1
chr11:102378015|102378145 hsa-miR-20b-5p 0 0 1
chr11:102378015|102378145 hsa-miR-20b-3p 0 0 1
chr11:102378015|102378145 hsa-miR-519d-5p 0 0 1
chr11:102378015|102378145 hsa-miR-519d-3p 0 0 1
chr11:102378015|102378145 hsa-miR-595 0 0 1
chr11:102378015|102378145 hsa-miR-613 0 1 1
chr11:102378015|102378145 hsa-miR-942-5p 0 0 1
chr11:102378015|102378145 hsa-miR-942-3p 0 0 1
chr11:102378015|102378145 hsa-miR-1267 0 0 1
chr11:102378015|102378145 hsa-miR-502-5p 0 0 1
chr11:102378015|102378145 hsa-miR-455-5p 0 0 1
chr11:102378015|102378145 hsa-miR-1 0 0 1
chr11:102378015|102378145 hsa-miR-365 0 0 1
chr11:102378015|102378145 hsa-miR-6086 0 1 0
chr11:102378015|102378145 hsa-miR-6867-5p 1 1 0
chr11:102378015|102378145 hsa-miR-6759-5p 1 0 0
chr11:102378015|102378145 hsa-miR-3189-5p 1 0 0
chr11:102378015|102378145 hsa-miR-656-5p 1 0 0
chr11:102378015|102378145 hsa-miR-6889-3p 1 0 0
chr11:102378015|102378145 hsa-miR-3675-3p 0 1 0
chr11:102378015|102378145 hsa-miR-6865-5p 1 0 0
chr11:102378015|102378145 hsa-miR-3127-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:102378015|102378145
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MAYYQMTTRNKYNRNFFVHTHFTSSFFLQP
Nucleotide Sequence CTGGCATACTACCAGATGACCACAAGGAATAAATACAACAGAAACTTCTTTGTCCATACACACTTTACAAGTTCGTTCTTCTTGCAACCT

CircID chr11:102378015|102378145
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICR
Nucleotide Sequence TTGCAAGAAGAACGAACTTGTAAAGTGTGTATGGACAAAGAAGTTTCTGTTGTATTTATTCCTTGTGGTCATCTGGTAGTATGCCAGGAATGTGCCCCTTCTCTAAGAAAATGCCCTATTTGCAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites