CircRNA Information

General Information
circRNA Basic Information
CircID chr11:10306431|10306631
Strand -
CircType exon
Host Gene ENSG00000148926.8;
Algorism CIRI2;
Sequence GGTGCAGAAGCTGGCACACCAGATCTACCAGTTCACAGATAAGGACAAGGACAACGTCGCCCCCAGGAGCAAGATCAGCCCCCAGGGCTACGGCCGCCGGCGCCGGCGCTCCCTGCCCGAGGCCGGCCCGGGTCGGACTCTGGTGTCTTCTAAGCCACAAGCACACGGGGCTCCAGCCCCCCCGAGTGGAAGTGCTCCCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:10306431|10306631 hsa-miR-379-5p 0 0 1
chr11:10306431|10306631 hsa-miR-379-3p 0 0 1
chr11:10306431|10306631 hsa-miR-636 1 0 1
chr11:10306431|10306631 hsa-miR-637 1 1 1
chr11:10306431|10306631 hsa-miR-939-5p 0 0 1
chr11:10306431|10306631 hsa-miR-939-3p 0 0 1
chr11:10306431|10306631 hsa-miR-1227-5p 0 0 1
chr11:10306431|10306631 hsa-miR-1227-3p 0 0 1
chr11:10306431|10306631 hsa-miR-1202 0 1 1
chr11:10306431|10306631 hsa-miR-1225-3p 0 1 1
chr11:10306431|10306631 hsa-miR-339-3p 0 0 1
chr11:10306431|10306631 hsa-miR-1207-5p 1 1 1
chr11:10306431|10306631 hsa-miR-582-3p 0 0 1
chr11:10306431|10306631 hsa-miR-218 0 0 1
chr11:10306431|10306631 hsa-miR-544 0 0 1
chr11:10306431|10306631 hsa-miR-129-3p 0 0 1
chr11:10306431|10306631 hsa-miR-638 1 0 0
chr11:10306431|10306631 hsa-miR-762 1 1 0
chr11:10306431|10306631 hsa-miR-3195 0 1 0
chr11:10306431|10306631 hsa-miR-3196 1 0 0
chr11:10306431|10306631 hsa-miR-4292 1 1 0
chr11:10306431|10306631 hsa-miR-3937 1 1 0
chr11:10306431|10306631 hsa-miR-1268b 1 0 0
chr11:10306431|10306631 hsa-miR-3135b 0 1 0
chr11:10306431|10306631 hsa-miR-4488 1 1 0
chr11:10306431|10306631 hsa-miR-4498 1 1 0
chr11:10306431|10306631 hsa-miR-4538 1 0 0
chr11:10306431|10306631 hsa-miR-4706 1 0 0
chr11:10306431|10306631 hsa-miR-4741 1 0 0
chr11:10306431|10306631 hsa-miR-6085 1 0 0
chr11:10306431|10306631 hsa-miR-6090 0 1 0
chr11:10306431|10306631 hsa-miR-7978 0 1 0
chr11:10306431|10306631 hsa-miR-12119 1 0 0
chr11:10306431|10306631 hsa-miR-128-1-5p 0 1 0
chr11:10306431|10306631 hsa-miR-6842-3p 1 0 0
chr11:10306431|10306631 hsa-miR-7108-5p 1 0 0
chr11:10306431|10306631 hsa-miR-491-5p 0 1 0
chr11:10306431|10306631 hsa-miR-3180-3p 1 0 0
chr11:10306431|10306631 hsa-miR-185-3p 1 1 0
chr11:10306431|10306631 hsa-miR-6805-5p 1 0 0
chr11:10306431|10306631 hsa-miR-1343-3p 0 1 0
chr11:10306431|10306631 hsa-miR-6852-5p 0 1 0
chr11:10306431|10306631 hsa-miR-1909-5p 1 1 0
chr11:10306431|10306631 hsa-miR-4787-5p 1 0 0
chr11:10306431|10306631 hsa-miR-7112-5p 1 1 0
chr11:10306431|10306631 hsa-miR-2355-3p 1 1 0
chr11:10306431|10306631 hsa-miR-502-5p 1 0 0
chr11:10306431|10306631 hsa-miR-1199-3p 0 1 0
chr11:10306431|10306631 hsa-miR-493-3p 1 0 0
chr11:10306431|10306631 hsa-miR-10400-5p 1 0 0
chr11:10306431|10306631 hsa-miR-4763-3p 1 1 0
chr11:10306431|10306631 hsa-miR-6816-5p 1 0 0
chr11:10306431|10306631 hsa-miR-1343-5p 1 1 0
chr11:10306431|10306631 hsa-miR-5001-5p 1 1 0
chr11:10306431|10306631 hsa-miR-6754-5p 0 1 0
chr11:10306431|10306631 hsa-miR-6803-5p 1 0 0
chr11:10306431|10306631 hsa-miR-6813-5p 1 0 0
chr11:10306431|10306631 hsa-miR-6751-5p 1 1 0
chr11:10306431|10306631 hsa-miR-3620-5p 1 0 0
chr11:10306431|10306631 hsa-miR-10392-5p 1 0 0
chr11:10306431|10306631 hsa-miR-10396b-5p 1 0 0
chr11:10306431|10306631 hsa-miR-328-5p 1 1 0
chr11:10306431|10306631 hsa-miR-6846-5p 1 1 0
chr11:10306431|10306631 hsa-miR-6848-5p 1 1 0
chr11:10306431|10306631 hsa-miR-6889-5p 0 1 0
chr11:10306431|10306631 hsa-miR-4697-5p 0 1 0
chr11:10306431|10306631 hsa-miR-6885-5p 1 1 0
chr11:10306431|10306631 hsa-miR-6724-5p 1 0 0
chr11:10306431|10306631 hsa-miR-6791-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:10306431|10306631
ORF Type ORF1
Protein Length 63
Nucleotide Length 189
Protein Sequence MAHQIYQFTDKDKDNVAPRSKISPQGYGRRRRRSLPEAGPGRTLVSSKPQAHGAPAPPSGSAP
Nucleotide Sequence CTGGCACACCAGATCTACCAGTTCACAGATAAGGACAAGGACAACGTCGCCCCCAGGAGCAAGATCAGCCCCCAGGGCTACGGCCGCCGGCGCCGGCGCTCCCTGCCCGAGGCCGGCCCGGGTCGGACTCTGGTGTCTTCTAAGCCACAAGCACACGGGGCTCCAGCCCCCCCGAGTGGAAGTGCTCCC

CircID chr11:10306431|10306631
ORF Type ORF2
Protein Length 53
Nucleotide Length 159
Protein Sequence MWLRRHQSPTRAGLGQGAPAPAAVALGADLAPGGDVVLVLICELVDLVCQLLH
Nucleotide Sequence TTGTGGCTTAGAAGACACCAGAGTCCGACCCGGGCCGGCCTCGGGCAGGGAGCGCCGGCGCCGGCGGCCGTAGCCCTGGGGGCTGATCTTGCTCCTGGGGGCGACGTTGTCCTTGTCCTTATCTGTGAACTGGTAGATCTGGTGTGCCAGCTTCTGCAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites