CircRNA Information

General Information
circRNA Basic Information
CircID chr11:10306569|10306756
Strand -
CircType exon
Host Gene ENSG00000148926.8;
Algorism CIRI2;
Sequence TCTGGTGTCTTCTAAGCCACAAGCACACGGGGCTCCAGCCCCCCCGAGTGGAAGTGCTCCCCACTTTCTTTAGGATTTAGGCGCCCATGGTACAAGGAATAGTCGCGCAAGCATCCCGCTGGTGCCTCCCGGGACGAAGGACTTCCCGAGCGGTGTGGGGACCGGGCTCTGACAGCCCTGCGGAGACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:10306569|10306756 hsa-miR-186-5p 0 0 1
chr11:10306569|10306756 hsa-miR-186-3p 0 0 1
chr11:10306569|10306756 hsa-miR-605-5p 0 0 1
chr11:10306569|10306756 hsa-miR-605-3p 0 0 1
chr11:10306569|10306756 hsa-miR-636 0 0 1
chr11:10306569|10306756 hsa-miR-650 0 0 1
chr11:10306569|10306756 hsa-miR-939-5p 0 0 1
chr11:10306569|10306756 hsa-miR-939-3p 0 0 1
chr11:10306569|10306756 hsa-miR-1226-5p 0 0 1
chr11:10306569|10306756 hsa-miR-1226-3p 0 0 1
chr11:10306569|10306756 hsa-miR-1225-3p 0 0 1
chr11:10306569|10306756 hsa-miR-491-5p 0 0 1
chr11:10306569|10306756 hsa-miR-566 0 0 1
chr11:10306569|10306756 hsa-miR-502-5p 1 0 1
chr11:10306569|10306756 hsa-miR-218 0 0 1
chr11:10306569|10306756 hsa-miR-220a 0 0 1
chr11:10306569|10306756 hsa-miR-572 1 0 0
chr11:10306569|10306756 hsa-miR-3196 1 0 0
chr11:10306569|10306756 hsa-miR-4706 1 0 0
chr11:10306569|10306756 hsa-miR-9899 1 0 0
chr11:10306569|10306756 hsa-miR-6741-5p 1 0 0
chr11:10306569|10306756 hsa-miR-6776-5p 1 0 0
chr11:10306569|10306756 hsa-miR-6786-5p 1 0 0
chr11:10306569|10306756 hsa-miR-7109-5p 1 0 0
chr11:10306569|10306756 hsa-miR-6789-5p 1 0 0
chr11:10306569|10306756 hsa-miR-500a-5p 1 0 0
chr11:10306569|10306756 hsa-miR-1343-5p 1 0 0
chr11:10306569|10306756 hsa-miR-10392-5p 1 0 0
chr11:10306569|10306756 hsa-miR-10396a-5p 1 0 0
chr11:10306569|10306756 hsa-miR-10396b-5p 1 0 0
chr11:10306569|10306756 hsa-miR-1909-3p 1 0 0
chr11:10306569|10306756 hsa-miR-328-5p 1 0 0
chr11:10306569|10306756 hsa-miR-4745-5p 1 0 0
chr11:10306569|10306756 hsa-miR-6777-5p 1 0 0
chr11:10306569|10306756 hsa-miR-1238-5p 1 0 0
chr11:10306569|10306756 hsa-miR-4758-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:10306569|10306756
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MVQGIVAQASRWCLPGRRTSRAVWGPGSDSPAET
Nucleotide Sequence ATGGTACAAGGAATAGTCGCGCAAGCATCCCGCTGGTGCCTCCCGGGACGAAGGACTTCCCGAGCGGTGTGGGGACCGGGCTCTGACAGCCCTGCGGAGACC

CircID chr11:10306569|10306756
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MRDYSLYHGRLNPKESGEHFHSGGLEPRVLVA
Nucleotide Sequence TTGCGCGACTATTCCTTGTACCATGGGCGCCTAAATCCTAAAGAAAGTGGGGAGCACTTCCACTCGGGGGGGCTGGAGCCCCGTGTGCTTGTGGCTTAG

CircID chr11:10306569|10306756
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MSEPGPHTAREVLRPGRHQRDACATIPCTMGA
Nucleotide Sequence CTGTCAGAGCCCGGTCCCCACACCGCTCGGGAAGTCCTTCGTCCCGGGAGGCACCAGCGGGATGCTTGCGCGACTATTCCTTGTACCATGGGCGCCTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites