CircRNA Information

General Information
circRNA Basic Information
CircID chr11:10306895|10307081
Strand +
CircType exon
Host Gene ENSG00000148926.8;
Algorism CIRI2;
Sequence CTCTGTATGTACAACACGCATTGCACTTTTCCTCTTTAGGTTTTGGAAAGTTCAAGTAATAGTGAGGCTTGCGCCCTGGTGGGGTGACACGCCGTGAGAAATCAGTTTGTGGGCGAGCACGGCTGTGGCTCAGACCCCTGCTCCGGGGGTCTCAGCATTCATTTCTCAGTTTCTCCTCTCCTTAAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:10306895|10307081 hsa-miR-17-5p 0 0 1
chr11:10306895|10307081 hsa-miR-17-3p 0 0 1
chr11:10306895|10307081 hsa-miR-20a-5p 0 0 1
chr11:10306895|10307081 hsa-miR-20a-3p 0 0 1
chr11:10306895|10307081 hsa-miR-93-5p 0 0 1
chr11:10306895|10307081 hsa-miR-93-3p 0 0 1
chr11:10306895|10307081 hsa-miR-106a-5p 0 0 1
chr11:10306895|10307081 hsa-miR-106a-3p 0 0 1
chr11:10306895|10307081 hsa-miR-130a-5p 0 0 1
chr11:10306895|10307081 hsa-miR-130a-3p 0 0 1
chr11:10306895|10307081 hsa-miR-106b-5p 0 0 1
chr11:10306895|10307081 hsa-miR-106b-3p 0 0 1
chr11:10306895|10307081 hsa-miR-301a-5p 0 0 1
chr11:10306895|10307081 hsa-miR-301a-3p 0 0 1
chr11:10306895|10307081 hsa-miR-130b-5p 0 0 1
chr11:10306895|10307081 hsa-miR-130b-3p 0 0 1
chr11:10306895|10307081 hsa-miR-20b-5p 0 0 1
chr11:10306895|10307081 hsa-miR-20b-3p 0 0 1
chr11:10306895|10307081 hsa-miR-519d-5p 0 0 1
chr11:10306895|10307081 hsa-miR-519d-3p 0 0 1
chr11:10306895|10307081 hsa-miR-539-5p 0 0 1
chr11:10306895|10307081 hsa-miR-539-3p 0 0 1
chr11:10306895|10307081 hsa-miR-583 0 0 1
chr11:10306895|10307081 hsa-miR-597-5p 0 0 1
chr11:10306895|10307081 hsa-miR-597-3p 0 0 1
chr11:10306895|10307081 hsa-miR-454-5p 0 0 1
chr11:10306895|10307081 hsa-miR-454-3p 0 0 1
chr11:10306895|10307081 hsa-miR-301b-5p 0 0 1
chr11:10306895|10307081 hsa-miR-301b-3p 0 0 1
chr11:10306895|10307081 hsa-miR-1229-5p 0 0 1
chr11:10306895|10307081 hsa-miR-1229-3p 0 0 1
chr11:10306895|10307081 hsa-miR-1203 0 0 1
chr11:10306895|10307081 hsa-miR-1276 0 0 1
chr11:10306895|10307081 hsa-miR-769-5p 0 0 1
chr11:10306895|10307081 hsa-miR-519b-3p 0 0 1
chr11:10306895|10307081 hsa-miR-519c-3p 0 0 1
chr11:10306895|10307081 hsa-miR-519a 0 0 1
chr11:10306895|10307081 hsa-miR-636 1 0 0
chr11:10306895|10307081 hsa-miR-765 1 0 0
chr11:10306895|10307081 hsa-miR-2110 1 0 0
chr11:10306895|10307081 hsa-miR-3154 1 0 0
chr11:10306895|10307081 hsa-miR-3916 1 0 0
chr11:10306895|10307081 hsa-miR-4428 1 0 0
chr11:10306895|10307081 hsa-miR-4496 1 0 0
chr11:10306895|10307081 hsa-miR-2392 1 0 0
chr11:10306895|10307081 hsa-miR-4533 1 0 0
chr11:10306895|10307081 hsa-miR-4644 1 0 0
chr11:10306895|10307081 hsa-miR-4689 1 0 0
chr11:10306895|10307081 hsa-miR-4706 1 0 0
chr11:10306895|10307081 hsa-miR-4739 1 0 0
chr11:10306895|10307081 hsa-miR-4784 1 0 0
chr11:10306895|10307081 hsa-miR-5191 1 0 0
chr11:10306895|10307081 hsa-miR-5192 1 0 0
chr11:10306895|10307081 hsa-miR-8085 1 0 0
chr11:10306895|10307081 hsa-miR-4433b-3p 1 0 0
chr11:10306895|10307081 hsa-miR-6734-5p 1 0 0
chr11:10306895|10307081 hsa-miR-4665-3p 1 0 0
chr11:10306895|10307081 hsa-miR-3150a-3p 1 0 0
chr11:10306895|10307081 hsa-miR-7106-5p 1 0 0
chr11:10306895|10307081 hsa-miR-6825-5p 1 0 0
chr11:10306895|10307081 hsa-miR-6510-5p 1 0 0
chr11:10306895|10307081 hsa-miR-766-5p 1 0 0
chr11:10306895|10307081 hsa-miR-139-3p 1 0 0
chr11:10306895|10307081 hsa-miR-5187-5p 1 0 0
chr11:10306895|10307081 hsa-miR-7847-3p 1 0 0
chr11:10306895|10307081 hsa-miR-4695-5p 1 0 0
chr11:10306895|10307081 hsa-miR-3180-3p 1 0 0
chr11:10306895|10307081 hsa-miR-6760-5p 1 0 0
chr11:10306895|10307081 hsa-miR-6782-5p 1 0 0
chr11:10306895|10307081 hsa-miR-6753-5p 1 0 0
chr11:10306895|10307081 hsa-miR-1908-5p 1 0 0
chr11:10306895|10307081 hsa-miR-4783-5p 1 0 0
chr11:10306895|10307081 hsa-miR-877-5p 1 0 0
chr11:10306895|10307081 hsa-miR-3202 1 0 0
chr11:10306895|10307081 hsa-miR-6824-5p 1 0 0
chr11:10306895|10307081 hsa-miR-3162-5p 1 0 0
chr11:10306895|10307081 hsa-miR-873-3p 1 0 0
chr11:10306895|10307081 hsa-miR-3180 1 0 0
chr11:10306895|10307081 hsa-miR-6797-5p 1 0 0
chr11:10306895|10307081 hsa-miR-6879-5p 1 0 0
chr11:10306895|10307081 hsa-miR-4649-5p 1 0 0
chr11:10306895|10307081 hsa-miR-4745-5p 1 0 0
chr11:10306895|10307081 hsa-miR-6729-5p 1 0 0
chr11:10306895|10307081 hsa-miR-6858-5p 1 0 0
chr11:10306895|10307081 hsa-miR-30c-1-3p 1 0 0
chr11:10306895|10307081 hsa-miR-6731-5p 1 0 0
chr11:10306895|10307081 hsa-miR-6856-5p 1 0 0
chr11:10306895|10307081 hsa-miR-4747-5p 1 0 0
chr11:10306895|10307081 hsa-miR-6891-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:10306895|10307081
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MWASTAVAQTPAPGVSAFISQFLLSLS
Nucleotide Sequence TTGTGGGCGAGCACGGCTGTGGCTCAGACCCCTGCTCCGGGGGTCTCAGCATTCATTTCTCAGTTTCTCCTCTCCTTAAGC
CircID chr11:10306895|10307081
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MRPGGVTRREKSVCGRARLWLRPLLRGSQHSFLSFSSP
Nucleotide Sequence TTGCGCCCTGGTGGGGTGACACGCCGTGAGAAATCAGTTTGTGGGCGAGCACGGCTGTGGCTCAGACCCCTGCTCCGGGGGTCTCAGCATTCATTTCTCAGTTTCTCCTCTCCTTAA
CircID chr11:10306895|10307081
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MSHSRARPQTDFSRRVTPPGRKPHYYLNFPKPKEEKCNACCTYR
Nucleotide Sequence CTGAGCCACAGCCGTGCTCGCCCACAAACTGATTTCTCACGGCGTGTCACCCCACCAGGGCGCAAGCCTCACTATTACTTGAACTTTCCAAAACCTAAAGAGGAAAAGTGCAATGCGTGTTGTACATACAGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab