CircRNA Information

General Information
circRNA Basic Information
CircID chr11:10802184|10802398
Strand -
CircType exon
Host Gene ENSG00000110321.14;
Algorism CIRI2;
Sequence TCCTGGACCAGTACCAATTCCGCTACCTGGCATTTGTCCAAACATATCAGCAAGTCCTCCAAGTGGGTCCCTATCCATTTTCATCCTGGGTGGCATGAACGGTCCCTCCAGAAAGAAGTCACTTCTCATCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:10802184|10802398 hsa-miR-432-5p 0 0 1
chr11:10802184|10802398 hsa-miR-432-3p 0 0 1
chr11:10802184|10802398 hsa-miR-617 0 0 1
chr11:10802184|10802398 hsa-miR-765 0 0 1
chr11:10802184|10802398 hsa-miR-890 0 0 1
chr11:10802184|10802398 hsa-miR-190b-5p 0 0 1
chr11:10802184|10802398 hsa-miR-190b-3p 0 0 1
chr11:10802184|10802398 hsa-miR-665 0 0 1
chr11:10802184|10802398 hsa-miR-1206 0 0 1
chr11:10802184|10802398 hsa-miR-1299 0 0 1
chr11:10802184|10802398 hsa-miR-1253 0 0 1
chr11:10802184|10802398 hsa-miR-1255a 0 0 1
chr11:10802184|10802398 hsa-miR-1263 0 0 1
chr11:10802184|10802398 hsa-miR-628-5p 0 0 1
chr11:10802184|10802398 hsa-miR-105 0 0 1
chr11:10802184|10802398 hsa-miR-1255b 0 0 1
chr11:10802184|10802398 hsa-miR-1300 0 0 1
chr11:10802184|10802398 hsa-miR-516b 0 0 1
chr11:10802184|10802398 hsa-miR-768-5p 0 0 1
chr11:10802184|10802398 hsa-miR-190 0 0 1
chr11:10802184|10802398 hsa-miR-663a 1 0 0
chr11:10802184|10802398 hsa-miR-711 0 1 0
chr11:10802184|10802398 hsa-miR-3138 0 1 0
chr11:10802184|10802398 hsa-miR-4498 1 0 0
chr11:10802184|10802398 hsa-miR-4689 1 0 0
chr11:10802184|10802398 hsa-miR-4721 1 0 0
chr11:10802184|10802398 hsa-miR-5190 1 0 0
chr11:10802184|10802398 hsa-miR-8075 1 0 0
chr11:10802184|10802398 hsa-miR-9718 1 0 0
chr11:10802184|10802398 hsa-miR-6894-5p 1 0 0
chr11:10802184|10802398 hsa-miR-3692-5p 1 0 0
chr11:10802184|10802398 hsa-miR-766-5p 1 0 0
chr11:10802184|10802398 hsa-miR-7154-3p 0 1 0
chr11:10802184|10802398 hsa-miR-6721-5p 1 0 0
chr11:10802184|10802398 hsa-miR-3126-5p 0 1 0
chr11:10802184|10802398 hsa-miR-5006-5p 1 1 0
chr11:10802184|10802398 hsa-miR-6815-3p 1 0 0
chr11:10802184|10802398 hsa-miR-1229-5p 1 0 0
chr11:10802184|10802398 hsa-miR-4640-5p 1 0 0
chr11:10802184|10802398 hsa-miR-7850-5p 0 1 0
chr11:10802184|10802398 hsa-miR-7152-3p 0 1 0
chr11:10802184|10802398 hsa-miR-3191-3p 1 0 0
chr11:10802184|10802398 hsa-miR-1225-5p 1 0 0
chr11:10802184|10802398 hsa-miR-4520-2-3p 0 1 0
chr11:10802184|10802398 hsa-miR-1343-5p 1 0 0
chr11:10802184|10802398 hsa-miR-1909-3p 1 0 0
chr11:10802184|10802398 hsa-miR-6858-5p 1 0 0
chr11:10802184|10802398 hsa-miR-6887-5p 1 0 0
chr11:10802184|10802398 hsa-miR-365a-5p 1 0 0
chr11:10802184|10802398 hsa-miR-5581-5p 1 0 0
chr11:10802184|10802398 hsa-miR-515-3p 0 1 0
chr11:10802184|10802398 hsa-miR-6820-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:10802184|10802398
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MSKHISKSSKWVPIHFHPGWHERSLQKEVTSH
Nucleotide Sequence TTGTCCAAACATATCAGCAAGTCCTCCAAGTGGGTCCCTATCCATTTTCATCCTGGGTGGCATGAACGGTCCCTCCAGAAAGAAGTCACTTCTCAT

CircID chr11:10802184|10802398
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence LDQYQFRYLAFVQTYQQVLQVGPYPFSSWVA
Nucleotide Sequence CTGGACCAGTACCAATTCCGCTACCTGGCATTTGTCCAAACATATCAGCAAGTCCTCCAAGTGGGTCCCTATCCATTTTCATCCTGGGTGGCATGA

CircID chr11:10802184|10802398
ORF Type ORF3
Protein Length 43
Nucleotide Length 129
Protein Sequence MRSDFFLEGPFMPPRMKMDRDPLGGLADMFGQMPGSGIGTGPG
Nucleotide Sequence ATGAGAAGTGACTTCTTTCTGGAGGGACCGTTCATGCCACCCAGGATGAAAATGGATAGGGACCCACTTGGAGGACTTGCTGATATGTTTGGACAAATGCCAGGTAGCGGAATTGGTACTGGTCCAGGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites