CircNet

General Information

circRNA Basic Information

CircID	chr11:108169744\|108190500
Strand	-
CircType	exon
Host Gene	ENSG00000149308.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAGCATGCAAAGTTCCCCAAGGTTTGCTGGCAGTCAGAGAGGATCTGCCATAATAATTGCCTCTCCAGTCCAGCCTGTACTCCAAGGAATGGTAGGGATGATCCCAGTATCTGTGGTTGGACAGAATGGAAATAACTTTTCTACTCCTCCTCGGCAGGTTCTTCATATGCCTTTGACAGCACCTGTATGCAATAGAAGTATCCCTCAATTCCCCGTCCCTCCAAAATCTCAGAAGGCTCAGGGACTAAGAAACAAGCCTTGTATAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr11:108169744\|108190500	hsa-miR-211-3p	0	1	1
chr11:108169744\|108190500	hsa-miR-216a-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr11:108169744\|108190500
ORF Type	ORF1
Protein Length	87
Nucleotide Length	261
Protein Sequence	MQSSPRFAGSQRGSAIIIASPVQPVLQGMVGMIPVSVVGQNGNNFSTPPRQVLHMPLTAPVCNRSIPQFPVPPKSQKAQGLRNKPCI
Nucleotide Sequence	ATGCAAAGTTCCCCAAGGTTTGCTGGCAGTCAGAGAGGATCTGCCATAATAATTGCCTCTCCAGTCCAGCCTGTACTCCAAGGAATGGTAGGGATGATCCCAGTATCTGTGGTTGGACAGAATGGAAATAACTTTTCTACTCCTCCTCGGCAGGTTCTTCATATGCCTTTGACAGCACCTGTATGCAATAGAAGTATCCCTCAATTCCCCGTCCCTCCAAAATCTCAGAAGGCTCAGGGACTAAGAAACAAGCCTTGTATA

CircID	chr11:108169744\|108190500
ORF Type	ORF2
Protein Length	55
Nucleotide Length	165
Protein Sequence	MKNLPRRSRKVISILSNHRYWDHPYHSLEYRLDWRGNYYGRSSLTASKPWGTLHA
Nucleotide Sequence	ATGAAGAACCTGCCGAGGAGGAGTAGAAAAGTTATTTCCATTCTGTCCAACCACAGATACTGGGATCATCCCTACCATTCCTTGGAGTACAGGCTGGACTGGAGAGGCAATTATTATGGCAGATCCTCTCTGACTGCCAGCAAACCTTGGGGAACTTTGCATGCT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr11:108169744\|108190500	NOP56	2	1	0
chr11:108169744\|108190500	ELAVL1	11	9	1
chr11:108169744\|108190500	PUM2	0	0	1
chr11:108169744\|108190500	PRPF8	0	3	0
chr11:108169744\|108190500	UPF1	1	0	0
chr11:108169744\|108190500	CPSF4	1	1	0
chr11:108169744\|108190500	FUS	4	0	0
chr11:108169744\|108190500	QKI	6	0	0
chr11:108169744\|108190500	SRSF1	0	0	1
chr11:108169744\|108190500	NOP58	1	1	1
chr11:108169744\|108190500	U2AF1	1	0	2
chr11:108169744\|108190500	U2AF2	19	11	5
chr11:108169744\|108190500	SRSF9	0	0	1
chr11:108169744\|108190500	DDX54	0	0	1
chr11:108169744\|108190500	RBM10	2	1	0
chr11:108169744\|108190500	PCBP2	2	1	0
chr11:108169744\|108190500	HNRNPM	0	1	0
chr11:108169744\|108190500	PTBP1	7	20	1
chr11:108169744\|108190500	HNRNPC	24	12	0
chr11:108169744\|108190500	HNRNPD	2	0	0
chr11:108169744\|108190500	TRA2A	0	0	1
chr11:108169744\|108190500	HNRNPA1	2	2	0
chr11:108169744\|108190500	ZC3H7B	1	0	0
chr11:108169744\|108190500	SMNDC1	1	0	3
chr11:108169744\|108190500	ACIN1	0	0	1
chr11:108169744\|108190500	RANGAP1	0	0	1
chr11:108169744\|108190500	LIN28B	2	1	0
chr11:108169744\|108190500	IGF2BP1	0	2	6
chr11:108169744\|108190500	IGF2BP3	0	0	2
chr11:108169744\|108190500	IGF2BP2	2	0	4
chr11:108169744\|108190500	TARDBP	3	0	0
chr11:108169744\|108190500	YTHDC1	0	0	1
chr11:108169744\|108190500	BUD13	1	0	2
chr11:108169744\|108190500	CSTF2T	7	0	0
chr11:108169744\|108190500	CSTF2	11	0	0
chr11:108169744\|108190500	RBM22	0	2	0
chr11:108169744\|108190500	TIAL1	0	1	0
chr11:108169744\|108190500	HNRNPK	0	1	0
chr11:108169744\|108190500	FBL	1	1	0
chr11:108169744\|108190500	EIF4A3	0	1	3
chr11:108169744\|108190500	AGO2	0	0	2

CircRNA Information