CircNet

General Information

circRNA Basic Information

CircID	chr11:113823605\|113833557
Strand	-
CircType	exon
Host Gene	ENSG00000048028.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAAAAGAGAAATATCATGTTTATGCAAGAGCTTCAGTATTTGTTTGCTCTAATGATGGGATCAAATAGAAAATTTGTAGACCCGTCTGCAGCCCTGGATCTATTAAAGGGAGCATTCCGATCATCTGAGGAACAGCAGGTACATGTACAGGAGCAAGGAGCTTATTCGAAATAAGAGAGAGTGTATTCGAAAGTTGAAGGAGGAAATAAAAATTCTGCAGCAAAAATTGGAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr11:113823605\|113833557
ORF Type	ORF1
Protein Length	53
Nucleotide Length	159
Protein Sequence	MFMQELQYLFALMMGSNRKFVDPSAALDLLKGAFRSSEEQQVHVQEQGAYSK*
Nucleotide Sequence	ATGTTTATGCAAGAGCTTCAGTATTTGTTTGCTCTAATGATGGGATCAAATAGAAAATTTGTAGACCCGTCTGCAGCCCTGGATCTATTAAAGGGAGCATTCCGATCATCTGAGGAACAGCAGGTACATGTACAGGAGCAAGGAGCTTATTCGAAATAA

CircID	chr11:113823605\|113833557
ORF Type	ORF2
Protein Length	35
Nucleotide Length	105
Protein Sequence	MIGMLPLIDPGLQTGLQIFYLIPSLEQTNTEALA*
Nucleotide Sequence	ATGATCGGAATGCTCCCTTTAATAGATCCAGGGCTGCAGACGGGTCTACAAATTTTCTATTTGATCCCATCATTAGAGCAAACAAATACTGAAGCTCTTGCATAA

CircID	chr11:113823605\|113833557
ORF Type	ORF3
Protein Length	30
Nucleotide Length	90
Protein Sequence	MYRSKELIRNKRECIRKLKEEIKILQQKLE
Nucleotide Sequence	ATGTACAGGAGCAAGGAGCTTATTCGAAATAAGAGAGAGTGTATTCGAAAGTTGAAGGAGGAAATAAAAATTCTGCAGCAAAAATTGGAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr11:113823605\|113833557	NOP56	0	2	0
chr11:113823605\|113833557	ELAVL1	6	1	0
chr11:113823605\|113833557	UPF1	2	0	0
chr11:113823605\|113833557	TAF15	0	1	0
chr11:113823605\|113833557	FMR1	0	1	2
chr11:113823605\|113833557	SRSF1	0	0	2
chr11:113823605\|113833557	NOP58	1	0	3
chr11:113823605\|113833557	U2AF1	2	0	0
chr11:113823605\|113833557	U2AF2	16	5	0
chr11:113823605\|113833557	DDX54	0	0	1
chr11:113823605\|113833557	RBM10	2	0	0
chr11:113823605\|113833557	HNRNPL	0	1	0
chr11:113823605\|113833557	SF3A3	1	0	0
chr11:113823605\|113833557	FIP1L1	0	1	0
chr11:113823605\|113833557	PTBP1	1	3	0
chr11:113823605\|113833557	HNRNPC	0	2	0
chr11:113823605\|113833557	DHX9	0	0	1
chr11:113823605\|113833557	HNRNPA1	0	1	0
chr11:113823605\|113833557	SMNDC1	1	0	0
chr11:113823605\|113833557	ACIN1	1	0	0
chr11:113823605\|113833557	LIN28B	1	0	0
chr11:113823605\|113833557	IGF2BP1	0	0	1
chr11:113823605\|113833557	IGF2BP2	0	0	3
chr11:113823605\|113833557	TARDBP	0	6	1
chr11:113823605\|113833557	BUD13	1	0	0
chr11:113823605\|113833557	RBFOX2	2	0	0
chr11:113823605\|113833557	CSTF2T	0	0	1
chr11:113823605\|113833557	TIA1	2	0	0
chr11:113823605\|113833557	HNRNPK	0	1	0
chr11:113823605\|113833557	FBL	2	0	0
chr11:113823605\|113833557	EIF4A3	1	3	3
chr11:113823605\|113833557	AGO2	1	0	1

CircRNA Information