CircRNA Information

General Information
circRNA Basic Information
CircID chr11:114253769|114254051
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence GGCCTAGTGGCCAGGGGGCAAGCTAAGAGGCTGTCTGGAGGCTTTATATGTGTCTGGAGTTAAGGGGAGAGGAGGAGGGTAGACAGGGGTCTCTCCCCAGGTGGGATCTGAATATCTGTCCTCCCCTCTTCTTCATGCCACCTGACTCCTTCGGCCCCCTGGCTGCCTTTAGCTGTGGTACTGCTGACAACCCTGCTTGCTACTGCCTTATCCAGCACAGTGAAAAACTTCTCCAGCCTGGCAAGGCCACGTTGGTTAATAGTCCCTTTCCCATGTCCAGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:114253769|114254051 hsa-miR-214-5p 0 0 1
chr11:114253769|114254051 hsa-miR-214-3p 0 0 1
chr11:114253769|114254051 hsa-miR-185-5p 0 0 1
chr11:114253769|114254051 hsa-miR-185-3p 0 0 1
chr11:114253769|114254051 hsa-miR-340-5p 0 0 1
chr11:114253769|114254051 hsa-miR-340-3p 0 0 1
chr11:114253769|114254051 hsa-miR-506-5p 0 0 1
chr11:114253769|114254051 hsa-miR-506-3p 0 0 1
chr11:114253769|114254051 hsa-miR-588 0 0 1
chr11:114253769|114254051 hsa-miR-922 0 0 1
chr11:114253769|114254051 hsa-miR-934 0 0 1
chr11:114253769|114254051 hsa-miR-939-5p 0 0 1
chr11:114253769|114254051 hsa-miR-939-3p 0 0 1
chr11:114253769|114254051 hsa-miR-1202 0 0 1
chr11:114253769|114254051 hsa-miR-1204 0 1 1
chr11:114253769|114254051 hsa-miR-1208 0 0 1
chr11:114253769|114254051 hsa-miR-1287-5p 0 0 1
chr11:114253769|114254051 hsa-miR-1287-3p 0 0 1
chr11:114253769|114254051 hsa-miR-1261 1 1 1
chr11:114253769|114254051 hsa-miR-1324 0 0 1
chr11:114253769|114254051 hsa-miR-125a-3p 0 0 1
chr11:114253769|114254051 hsa-miR-296-3p 0 0 1
chr11:114253769|114254051 hsa-miR-142-5p 0 0 1
chr11:114253769|114254051 hsa-miR-339-5p 0 0 1
chr11:114253769|114254051 hsa-miR-508-5p 0 0 1
chr11:114253769|114254051 hsa-miR-1224-3p 0 1 1
chr11:114253769|114254051 hsa-miR-331-3p 0 0 1
chr11:114253769|114254051 hsa-miR-140-3p 0 0 1
chr11:114253769|114254051 hsa-miR-1260 0 0 1
chr11:114253769|114254051 hsa-miR-1280 0 0 1
chr11:114253769|114254051 hsa-miR-124 0 0 1
chr11:114253769|114254051 hsa-miR-453 0 0 1
chr11:114253769|114254051 hsa-miR-3153 0 1 0
chr11:114253769|114254051 hsa-miR-3175 0 1 0
chr11:114253769|114254051 hsa-miR-3185 0 1 0
chr11:114253769|114254051 hsa-miR-4313 0 1 0
chr11:114253769|114254051 hsa-miR-4269 1 0 0
chr11:114253769|114254051 hsa-miR-4270 1 0 0
chr11:114253769|114254051 hsa-miR-4290 0 1 0
chr11:114253769|114254051 hsa-miR-3652 1 1 0
chr11:114253769|114254051 hsa-miR-3714 1 0 0
chr11:114253769|114254051 hsa-miR-3945 1 0 0
chr11:114253769|114254051 hsa-miR-378e 1 0 0
chr11:114253769|114254051 hsa-miR-378f 1 0 0
chr11:114253769|114254051 hsa-miR-4428 0 1 0
chr11:114253769|114254051 hsa-miR-378h 1 0 0
chr11:114253769|114254051 hsa-miR-3135b 1 0 0
chr11:114253769|114254051 hsa-miR-4510 0 1 0
chr11:114253769|114254051 hsa-miR-4656 1 1 0
chr11:114253769|114254051 hsa-miR-4692 1 0 0
chr11:114253769|114254051 hsa-miR-4739 1 0 0
chr11:114253769|114254051 hsa-miR-4741 1 0 0
chr11:114253769|114254051 hsa-miR-5193 0 1 0
chr11:114253769|114254051 hsa-miR-5100 1 1 0
chr11:114253769|114254051 hsa-miR-6074 0 1 0
chr11:114253769|114254051 hsa-miR-6085 1 0 0
chr11:114253769|114254051 hsa-miR-6127 1 0 0
chr11:114253769|114254051 hsa-miR-6129 1 1 0
chr11:114253769|114254051 hsa-miR-6131 1 0 0
chr11:114253769|114254051 hsa-miR-6860 1 0 0
chr11:114253769|114254051 hsa-miR-8060 0 1 0
chr11:114253769|114254051 hsa-miR-8085 1 1 0
chr11:114253769|114254051 hsa-miR-8089 0 1 0
chr11:114253769|114254051 hsa-miR-12126 0 1 0
chr11:114253769|114254051 hsa-miR-128-1-5p 0 1 0
chr11:114253769|114254051 hsa-miR-3150a-3p 0 1 0
chr11:114253769|114254051 hsa-miR-6861-5p 1 0 0
chr11:114253769|114254051 hsa-miR-7106-5p 0 1 0
chr11:114253769|114254051 hsa-miR-6825-5p 0 1 0
chr11:114253769|114254051 hsa-miR-766-3p 1 0 0
chr11:114253769|114254051 hsa-miR-4695-5p 1 0 0
chr11:114253769|114254051 hsa-miR-7154-3p 0 1 0
chr11:114253769|114254051 hsa-miR-4755-3p 0 1 0
chr11:114253769|114254051 hsa-miR-3622b-5p 1 0 0
chr11:114253769|114254051 hsa-miR-770-5p 0 1 0
chr11:114253769|114254051 hsa-miR-1915-5p 0 1 0
chr11:114253769|114254051 hsa-miR-3180-3p 1 0 0
chr11:114253769|114254051 hsa-miR-6732-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6805-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6798-5p 1 1 0
chr11:114253769|114254051 hsa-miR-5006-5p 0 1 0
chr11:114253769|114254051 hsa-miR-6835-5p 1 0 0
chr11:114253769|114254051 hsa-miR-4640-5p 1 0 0
chr11:114253769|114254051 hsa-miR-30c-2-3p 0 1 0
chr11:114253769|114254051 hsa-miR-6823-5p 0 1 0
chr11:114253769|114254051 hsa-miR-4717-3p 1 0 0
chr11:114253769|114254051 hsa-miR-7111-3p 0 1 0
chr11:114253769|114254051 hsa-miR-4743-5p 1 1 0
chr11:114253769|114254051 hsa-miR-4638-3p 1 0 0
chr11:114253769|114254051 hsa-miR-4667-3p 0 1 0
chr11:114253769|114254051 hsa-miR-6781-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6877-5p 1 1 0
chr11:114253769|114254051 hsa-miR-3190-5p 0 1 0
chr11:114253769|114254051 hsa-miR-1225-5p 1 0 0
chr11:114253769|114254051 hsa-miR-1250-5p 1 0 0
chr11:114253769|114254051 hsa-miR-3180-5p 1 0 0
chr11:114253769|114254051 hsa-miR-7848-3p 0 1 0
chr11:114253769|114254051 hsa-miR-34a-5p 1 0 0
chr11:114253769|114254051 hsa-miR-5004-5p 0 1 0
chr11:114253769|114254051 hsa-miR-6846-3p 0 1 0
chr11:114253769|114254051 hsa-miR-6509-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6780b-3p 0 1 0
chr11:114253769|114254051 hsa-miR-1207-5p 1 0 0
chr11:114253769|114254051 hsa-miR-4763-3p 1 0 0
chr11:114253769|114254051 hsa-miR-6865-5p 0 1 0
chr11:114253769|114254051 hsa-miR-6893-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6775-5p 1 0 0
chr11:114253769|114254051 hsa-miR-5001-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6726-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6752-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6813-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6815-5p 0 1 0
chr11:114253769|114254051 hsa-miR-6851-5p 1 0 0
chr11:114253769|114254051 hsa-miR-7107-5p 1 0 0
chr11:114253769|114254051 hsa-miR-10401-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6722-3p 1 0 0
chr11:114253769|114254051 hsa-miR-6808-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6879-5p 1 0 0
chr11:114253769|114254051 hsa-miR-3620-5p 1 0 0
chr11:114253769|114254051 hsa-miR-5189-5p 1 0 0
chr11:114253769|114254051 hsa-miR-5196-5p 1 0 0
chr11:114253769|114254051 hsa-miR-642b-3p 0 1 0
chr11:114253769|114254051 hsa-miR-6780b-5p 1 0 0
chr11:114253769|114254051 hsa-miR-328-5p 1 1 0
chr11:114253769|114254051 hsa-miR-449c-5p 1 0 0
chr11:114253769|114254051 hsa-miR-4632-5p 1 0 0
chr11:114253769|114254051 hsa-miR-4649-5p 1 0 0
chr11:114253769|114254051 hsa-miR-4685-5p 1 0 0
chr11:114253769|114254051 hsa-miR-4725-3p 1 0 0
chr11:114253769|114254051 hsa-miR-4726-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6729-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6735-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6794-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6795-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6846-5p 1 1 0
chr11:114253769|114254051 hsa-miR-6848-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6887-5p 1 1 0
chr11:114253769|114254051 hsa-miR-3187-5p 1 0 0
chr11:114253769|114254051 hsa-miR-34b-5p 0 1 0
chr11:114253769|114254051 hsa-miR-6511a-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6511b-5p 1 0 0
chr11:114253769|114254051 hsa-miR-30c-1-3p 0 1 0
chr11:114253769|114254051 hsa-miR-1914-3p 1 0 0
chr11:114253769|114254051 hsa-miR-6877-3p 1 1 0
chr11:114253769|114254051 hsa-miR-4700-5p 0 1 0
chr11:114253769|114254051 hsa-miR-4747-5p 1 0 0
chr11:114253769|114254051 hsa-miR-4716-3p 1 0 0
chr11:114253769|114254051 hsa-miR-4667-5p 0 1 0
chr11:114253769|114254051 hsa-miR-2682-3p 0 1 0
chr11:114253769|114254051 hsa-miR-6762-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6819-3p 1 0 0
chr11:114253769|114254051 hsa-miR-6744-3p 1 0 0
chr11:114253769|114254051 hsa-miR-323b-5p 0 1 0
chr11:114253769|114254051 hsa-miR-449b-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6876-3p 0 1 0
chr11:114253769|114254051 hsa-miR-3619-5p 1 0 0
chr11:114253769|114254051 hsa-miR-6771-3p 0 1 0
chr11:114253769|114254051 hsa-miR-5699-3p 0 1 0
chr11:114253769|114254051 hsa-miR-7157-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:114253769|114254051
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence MTPSAPWLPLAVVLLTTLLATALSSTVKNFSSLARPRWLIVPFPCPA
Nucleotide Sequence CTGACTCCTTCGGCCCCCTGGCTGCCTTTAGCTGTGGTACTGCTGACAACCCTGCTTGCTACTGCCTTATCCAGCACAGTGAAAAACTTCTCCAGCCTGGCAAGGCCACGTTGGTTAATAGTCCCTTTCCCATGTCCAGCT
CircID chr11:114253769|114254051
ORF Type ORF2
Protein Length 78
Nucleotide Length 234
Protein Sequence MCLELRGEEEGRQGSLPRWDLNICPPLFFMPPDSFGPLAAFSCGTADNPACYCLIQHSEKLLQPGKATLVNSPFPMSS
Nucleotide Sequence ATGTGTCTGGAGTTAAGGGGAGAGGAGGAGGGTAGACAGGGGTCTCTCCCCAGGTGGGATCTGAATATCTGTCCTCCCCTCTTCTTCATGCCACCTGACTCCTTCGGCCCCCTGGCTGCCTTTAGCTGTGGTACTGCTGACAACCCTGCTTGCTACTGCCTTATCCAGCACAGTGAAAAACTTCTCCAGCCTGGCAAGGCCACGTTGGTTAATAGTCCCTTTCCCATGTCCAGC
CircID chr11:114253769|114254051
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MDMGKGLLTNVALPGWRSFSLCWIRQ
Nucleotide Sequence CTGGACATGGGAAAGGGACTATTAACCAACGTGGCCTTGCCAGGCTGGAGAAGTTTTTCACTGTGCTGGATAAGGCAGTAG
CircID chr11:114253769|114254051
ORF Type ORF4
Protein Length 48
Nucleotide Length 147
Protein Sequence MSAVPQLKAARGPKESGGMKKRGGQIFRSHLGRDPCLPSSSPLNSRHI
Nucleotide Sequence TTGTCAGCAGTACCACAGCTAAAGGCAGCCAGGGGGCCGAAGGAGTCAGGTGGCATGAAGAAGAGGGGAGGACAGATATTCAGATCCCACCTGGGGAGAGACCCCTGTCTACCCTCCTCCTCTCCCCTTAACTCCAGACACATATAA
CircID chr11:114253769|114254051
ORF Type ORF5
Protein Length 58
Nucleotide Length 177
Protein Sequence MEKFFTVLDKAVASRVVSSTTAKGSQGAEGVRWHEEEGRTDIQIPPGERPLSTLLLSP
Nucleotide Sequence CTGGAGAAGTTTTTCACTGTGCTGGATAAGGCAGTAGCAAGCAGGGTTGTCAGCAGTACCACAGCTAAAGGCAGCCAGGGGGCCGAAGGAGTCAGGTGGCATGAAGAAGAGGGGAGGACAGATATTCAGATCCCACCTGGGGAGAGACCCCTGTCTACCCTCCTCCTCTCCCCTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab