CircRNA Information

General Information
circRNA Basic Information
CircID chr11:116846383|116846532
Strand -
CircType exon
Host Gene ENSG00000160584.14;
Algorism CIRI2;
Sequence TCTCTGTTTCTTGTTACACGCCTGCCTGCTCCATGCTGAAGGAGACTTCGGGGTGCTTGTAGCTGAGCAGAATGTCTGTAATACACGTAGATGGATAGCAAGAGGAGTTTAAATGCTGGCTGCCATCACTCAGGTCTGGGTGCTCATGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:116846383|116846532
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MLHACLLHAEGDFGVLVAEQNVCNTRRWIARGV
Nucleotide Sequence TTGTTACACGCCTGCCTGCTCCATGCTGAAGGAGACTTCGGGGTGCTTGTAGCTGAGCAGAATGTCTGTAATACACGTAGATGGATAGCAAGAGGAGTTTAA

CircID chr11:116846383|116846532
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MLSIYVYYRHSAQLQAPRSLLQHGAGRRVTRNR
Nucleotide Sequence TTGCTATCCATCTACGTGTATTACAGACATTCTGCTCAGCTACAAGCACCCCGAAGTCTCCTTCAGCATGGAGCAGGCAGGCGTGTAACAAGAAACAGA

CircID chr11:116846383|116846532
ORF Type ORF3
Protein Length 39
Nucleotide Length 120
Protein Sequence MSDGSQHLNSSCYPSTCITDILLSYKHPEVSFSMEQAGV
Nucleotide Sequence CTGAGTGATGGCAGCCAGCATTTAAACTCCTCTTGCTATCCATCTACGTGTATTACAGACATTCTGCTCAGCTACAAGCACCCCGAAGTCTCCTTCAGCATGGAGCAGGCAGGCGTGTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites