CircRNA Information

General Information
circRNA Basic Information
CircID chr11:117371080|117371197
Strand +
CircType exon
Host Gene ENSG00000110274.13;
Algorism CIRI2;
Sequence TGCTCAGACTGCTGTCTGCACCTGGGCTGGAGGGCTTGCAGGGAGTAGGGGGACCGGCAGCATCTGAATCCAGAGAAACATCCTTCTTCTCCTCTGGCTGGCTTGTTCTCAGAGACTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:117371080|117371197 hsa-miR-146a-5p 0 0 1
chr11:117371080|117371197 hsa-miR-146a-3p 0 0 1
chr11:117371080|117371197 hsa-miR-326 1 0 1
chr11:117371080|117371197 hsa-miR-589-5p 0 0 1
chr11:117371080|117371197 hsa-miR-589-3p 0 0 1
chr11:117371080|117371197 hsa-miR-593-5p 0 0 1
chr11:117371080|117371197 hsa-miR-593-3p 0 0 1
chr11:117371080|117371197 hsa-miR-622 0 0 1
chr11:117371080|117371197 hsa-miR-766-5p 0 0 1
chr11:117371080|117371197 hsa-miR-766-3p 0 0 1
chr11:117371080|117371197 hsa-miR-1253 0 0 1
chr11:117371080|117371197 hsa-miR-1265 0 0 1
chr11:117371080|117371197 hsa-miR-1324 0 0 1
chr11:117371080|117371197 hsa-miR-330-5p 0 0 1
chr11:117371080|117371197 hsa-miR-146b-5p 0 0 1
chr11:117371080|117371197 hsa-miR-764 0 1 0
chr11:117371080|117371197 hsa-miR-765 1 1 0
chr11:117371080|117371197 hsa-miR-3135a 0 1 0
chr11:117371080|117371197 hsa-miR-3185 1 1 0
chr11:117371080|117371197 hsa-miR-3916 1 1 0
chr11:117371080|117371197 hsa-miR-3921 0 1 0
chr11:117371080|117371197 hsa-miR-4533 1 0 0
chr11:117371080|117371197 hsa-miR-5685 0 1 0
chr11:117371080|117371197 hsa-miR-5706 0 1 0
chr11:117371080|117371197 hsa-miR-6720-5p 0 1 0
chr11:117371080|117371197 hsa-miR-6746-5p 1 0 0
chr11:117371080|117371197 hsa-miR-3194-5p 1 1 0
chr11:117371080|117371197 hsa-miR-5006-5p 1 0 0
chr11:117371080|117371197 hsa-miR-6882-3p 1 0 0
chr11:117371080|117371197 hsa-miR-7113-3p 0 1 0
chr11:117371080|117371197 hsa-miR-3191-5p 1 0 0
chr11:117371080|117371197 hsa-miR-6847-5p 0 1 0
chr11:117371080|117371197 hsa-miR-4640-3p 0 1 0
chr11:117371080|117371197 hsa-miR-4687-5p 0 1 0
chr11:117371080|117371197 hsa-miR-4746-5p 0 1 0
chr11:117371080|117371197 hsa-miR-541-5p 1 0 0
chr11:117371080|117371197 hsa-miR-1287-3p 0 1 0
chr11:117371080|117371197 hsa-miR-550b-3p 0 1 0
chr11:117371080|117371197 hsa-miR-627-5p 0 1 0
chr11:117371080|117371197 hsa-miR-4726-5p 1 0 0
chr11:117371080|117371197 hsa-miR-6511b-5p 0 1 0
chr11:117371080|117371197 hsa-miR-6810-3p 1 1 0
chr11:117371080|117371197 hsa-miR-4691-5p 0 1 0
chr11:117371080|117371197 hsa-miR-4690-3p 0 1 0
chr11:117371080|117371197 hsa-miR-4653-5p 0 1 0
chr11:117371080|117371197 hsa-miR-892c-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:117371080|117371197
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MLSAPGLEGLQGVGGPAASESRETSFFSSGWLVLRD
Nucleotide Sequence CTGCTGTCTGCACCTGGGCTGGAGGGCTTGCAGGGAGTAGGGGGACCGGCAGCATCTGAATCCAGAGAAACATCCTTCTTCTCCTCTGGCTGGCTTGTTCTCAGAGAC

CircID chr11:117371080|117371197
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MRTSQPEEKKDVSLDSDAAGPPTPCKPSSPGADSSLS
Nucleotide Sequence CTGAGAACAAGCCAGCCAGAGGAGAAGAAGGATGTTTCTCTGGATTCAGATGCTGCCGGTCCCCCTACTCCCTGCAAGCCCTCCAGCCCAGGTGCAGACAGCAGTCTGAGC

CircID chr11:117371080|117371197
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MFLWIQMLPVPLLPASPPAQVQTAV
Nucleotide Sequence ATGTTTCTCTGGATTCAGATGCTGCCGGTCCCCCTACTCCCTGCAAGCCCTCCAGCCCAGGTGCAGACAGCAGTCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites