CircRNA Information

General Information
circRNA Basic Information
CircID chr11:117999655|117999843
Strand +
CircType exon
Host Gene ENSG00000110324.8;
Algorism CIRI2;
Sequence CCTGCACTAGTTCAGTGAGTTGGCCTCCTCCTGCCCCAGACACCCTGACCAGCCCTGCAGGGCCTGGCTGGGGCCAGCCCCAGTGGACTTGCAGAAAAGTGCCCAGACTGCCTCGTGCCTAACTTCTGCCCCAGGGGCCCTCCTCCTGGTCCAGGCAGAGGAGCAGGCATGGCTAAAATCAAAAGCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:117999655|117999843 hsa-miR-130a-5p 0 0 1
chr11:117999655|117999843 hsa-miR-130a-3p 0 0 1
chr11:117999655|117999843 hsa-miR-301a-5p 0 0 1
chr11:117999655|117999843 hsa-miR-301a-3p 0 0 1
chr11:117999655|117999843 hsa-miR-130b-5p 0 0 1
chr11:117999655|117999843 hsa-miR-130b-3p 0 0 1
chr11:117999655|117999843 hsa-miR-612 1 1 1
chr11:117999655|117999843 hsa-miR-622 0 0 1
chr11:117999655|117999843 hsa-miR-637 1 0 1
chr11:117999655|117999843 hsa-miR-661 0 0 1
chr11:117999655|117999843 hsa-miR-454-5p 0 0 1
chr11:117999655|117999843 hsa-miR-454-3p 0 0 1
chr11:117999655|117999843 hsa-miR-765 0 0 1
chr11:117999655|117999843 hsa-miR-298 0 1 1
chr11:117999655|117999843 hsa-miR-665 0 1 1
chr11:117999655|117999843 hsa-miR-301b-5p 0 0 1
chr11:117999655|117999843 hsa-miR-301b-3p 0 0 1
chr11:117999655|117999843 hsa-miR-1231 1 0 1
chr11:117999655|117999843 hsa-miR-1205 0 1 1
chr11:117999655|117999843 hsa-miR-1291 0 0 1
chr11:117999655|117999843 hsa-miR-1827 0 0 1
chr11:117999655|117999843 hsa-miR-296-5p 0 0 1
chr11:117999655|117999843 hsa-miR-486-3p 0 1 1
chr11:117999655|117999843 hsa-miR-331-3p 0 0 1
chr11:117999655|117999843 hsa-miR-1285 0 0 1
chr11:117999655|117999843 hsa-miR-544 0 0 1
chr11:117999655|117999843 hsa-miR-1254 0 0 1
chr11:117999655|117999843 hsa-miR-663a 1 0 0
chr11:117999655|117999843 hsa-miR-762 1 1 0
chr11:117999655|117999843 hsa-miR-1183 1 0 0
chr11:117999655|117999843 hsa-miR-1469 1 0 0
chr11:117999655|117999843 hsa-miR-3141 1 0 0
chr11:117999655|117999843 hsa-miR-3147 1 0 0
chr11:117999655|117999843 hsa-miR-3155a 0 1 0
chr11:117999655|117999843 hsa-miR-3196 1 0 0
chr11:117999655|117999843 hsa-miR-4298 1 0 0
chr11:117999655|117999843 hsa-miR-4260 0 1 0
chr11:117999655|117999843 hsa-miR-4268 0 1 0
chr11:117999655|117999843 hsa-miR-4270 1 0 0
chr11:117999655|117999843 hsa-miR-3155b 0 1 0
chr11:117999655|117999843 hsa-miR-4486 1 0 0
chr11:117999655|117999843 hsa-miR-4492 0 1 0
chr11:117999655|117999843 hsa-miR-4498 1 1 0
chr11:117999655|117999843 hsa-miR-1587 1 0 0
chr11:117999655|117999843 hsa-miR-4656 1 0 0
chr11:117999655|117999843 hsa-miR-4669 1 0 0
chr11:117999655|117999843 hsa-miR-4688 1 0 0
chr11:117999655|117999843 hsa-miR-4692 1 0 0
chr11:117999655|117999843 hsa-miR-4734 1 1 0
chr11:117999655|117999843 hsa-miR-4741 1 0 0
chr11:117999655|117999843 hsa-miR-5090 1 0 0
chr11:117999655|117999843 hsa-miR-5787 1 0 0
chr11:117999655|117999843 hsa-miR-6080 0 1 0
chr11:117999655|117999843 hsa-miR-6081 1 0 0
chr11:117999655|117999843 hsa-miR-6131 0 1 0
chr11:117999655|117999843 hsa-miR-6132 0 1 0
chr11:117999655|117999843 hsa-miR-6860 1 0 0
chr11:117999655|117999843 hsa-miR-8089 1 0 0
chr11:117999655|117999843 hsa-miR-12128 1 0 0
chr11:117999655|117999843 hsa-miR-3157-5p 0 1 0
chr11:117999655|117999843 hsa-miR-6747-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6861-5p 1 0 0
chr11:117999655|117999843 hsa-miR-7106-5p 0 1 0
chr11:117999655|117999843 hsa-miR-6857-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6804-5p 1 0 0
chr11:117999655|117999843 hsa-miR-3622a-5p 0 1 0
chr11:117999655|117999843 hsa-miR-4695-5p 1 0 0
chr11:117999655|117999843 hsa-miR-4722-5p 1 1 0
chr11:117999655|117999843 hsa-miR-4755-3p 1 1 0
chr11:117999655|117999843 hsa-miR-593-5p 0 1 0
chr11:117999655|117999843 hsa-miR-6727-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6806-5p 0 1 0
chr11:117999655|117999843 hsa-miR-3180-3p 1 0 0
chr11:117999655|117999843 hsa-miR-6772-5p 1 0 0
chr11:117999655|117999843 hsa-miR-185-3p 0 1 0
chr11:117999655|117999843 hsa-miR-6798-5p 0 1 0
chr11:117999655|117999843 hsa-miR-942-5p 0 1 0
chr11:117999655|117999843 hsa-miR-5088-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6772-3p 0 1 0
chr11:117999655|117999843 hsa-miR-6740-5p 1 0 0
chr11:117999655|117999843 hsa-miR-1229-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6894-3p 0 1 0
chr11:117999655|117999843 hsa-miR-5001-3p 0 1 0
chr11:117999655|117999843 hsa-miR-296-3p 1 0 0
chr11:117999655|117999843 hsa-miR-6823-5p 1 1 0
chr11:117999655|117999843 hsa-miR-4638-3p 1 0 0
chr11:117999655|117999843 hsa-miR-3690 0 1 0
chr11:117999655|117999843 hsa-miR-4446-3p 0 1 0
chr11:117999655|117999843 hsa-miR-937-5p 1 0 0
chr11:117999655|117999843 hsa-miR-3162-5p 1 0 0
chr11:117999655|117999843 hsa-miR-2276-3p 0 1 0
chr11:117999655|117999843 hsa-miR-4776-5p 1 1 0
chr11:117999655|117999843 hsa-miR-1225-5p 1 0 0
chr11:117999655|117999843 hsa-miR-5003-3p 0 1 0
chr11:117999655|117999843 hsa-miR-744-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6872-3p 0 1 0
chr11:117999655|117999843 hsa-miR-4763-3p 1 0 0
chr11:117999655|117999843 hsa-miR-6816-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6775-5p 1 1 0
chr11:117999655|117999843 hsa-miR-5001-5p 0 1 0
chr11:117999655|117999843 hsa-miR-6743-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6752-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6803-5p 1 0 0
chr11:117999655|117999843 hsa-miR-7110-5p 1 0 0
chr11:117999655|117999843 hsa-miR-11181-3p 0 1 0
chr11:117999655|117999843 hsa-miR-6722-3p 1 0 0
chr11:117999655|117999843 hsa-miR-6774-5p 1 1 0
chr11:117999655|117999843 hsa-miR-7111-5p 1 0 0
chr11:117999655|117999843 hsa-miR-3620-5p 1 1 0
chr11:117999655|117999843 hsa-miR-5189-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6836-5p 1 1 0
chr11:117999655|117999843 hsa-miR-10396b-5p 1 0 0
chr11:117999655|117999843 hsa-miR-1237-5p 1 0 0
chr11:117999655|117999843 hsa-miR-449c-5p 1 0 0
chr11:117999655|117999843 hsa-miR-4649-5p 1 0 0
chr11:117999655|117999843 hsa-miR-4685-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6735-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6777-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6846-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6889-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6511a-5p 1 1 0
chr11:117999655|117999843 hsa-miR-6511b-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6799-3p 0 1 0
chr11:117999655|117999843 hsa-miR-1271-3p 0 1 0
chr11:117999655|117999843 hsa-miR-3116 0 1 0
chr11:117999655|117999843 hsa-miR-6724-5p 1 0 0
chr11:117999655|117999843 hsa-miR-6791-5p 1 1 0
chr11:117999655|117999843 hsa-miR-10392-3p 0 1 0
chr11:117999655|117999843 hsa-miR-330-5p 1 0 0
chr11:117999655|117999843 hsa-miR-10394-5p 0 1 0
chr11:117999655|117999843 hsa-miR-6715b-5p 1 0 0
chr11:117999655|117999843 hsa-miR-181b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:117999655|117999843
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MQGLAGASPSGLAEKCPDCLVPNFCPRGPPPGPGRGAGMAKIKSS
Nucleotide Sequence CTGCAGGGCCTGGCTGGGGCCAGCCCCAGTGGACTTGCAGAAAAGTGCCCAGACTGCCTCGTGCCTAACTTCTGCCCCAGGGGCCCTCCTCCTGGTCCAGGCAGAGGAGCAGGCATGGCTAAAATCAAAAGCAGC
CircID chr11:117999655|117999843
ORF Type ORF2
Protein Length 56
Nucleotide Length 168
Protein Sequence MASSCPRHPDQPCRAWLGPAPVDLQKSAQTASCLTSAPGALLLVQAEEQAWLKSKA
Nucleotide Sequence TTGGCCTCCTCCTGCCCCAGACACCCTGACCAGCCCTGCAGGGCCTGGCTGGGGCCAGCCCCAGTGGACTTGCAGAAAAGTGCCCAGACTGCCTCGTGCCTAACTTCTGCCCCAGGGGCCCTCCTCCTGGTCCAGGCAGAGGAGCAGGCATGGCTAAAATCAAAAGCA
CircID chr11:117999655|117999843
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MTSPAGPGWGQPQWTCRKVPRLPRA
Nucleotide Sequence CTGACCAGCCCTGCAGGGCCTGGCTGGGGCCAGCCCCAGTGGACTTGCAGAAAAGTGCCCAGACTGCCTCGTGCCTAA
CircID chr11:117999655|117999843
ORF Type ORF4
Protein Length 58
Nucleotide Length 177
Protein Sequence LLLILAMPAPLPGPGGGPLGQKLGTRQSGHFSASPLGLAPARPCRAGQGVWGRRRPTH
Nucleotide Sequence CTGCTTTTGATTTTAGCCATGCCTGCTCCTCTGCCTGGACCAGGAGGAGGGCCCCTGGGGCAGAAGTTAGGCACGAGGCAGTCTGGGCACTTTTCTGCAAGTCCACTGGGGCTGGCCCCAGCCAGGCCCTGCAGGGCTGGTCAGGGTGTCTGGGGCAGGAGGAGGCCAACTCACTGA
CircID chr11:117999655|117999843
ORF Type ORF5
Protein Length 35
Nucleotide Length 105
Protein Sequence MGTFLQVHWGWPQPGPAGLVRVSGAGGGQLTELVQ
Nucleotide Sequence CTGGGCACTTTTCTGCAAGTCCACTGGGGCTGGCCCCAGCCAGGCCCTGCAGGGCTGGTCAGGGTGTCTGGGGCAGGAGGAGGCCAACTCACTGAACTAGTGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab