CircRNA Information

General Information
circRNA Basic Information
CircID chr11:118134041|118134141
Strand -
CircType exon
Host Gene ENSG00000177098.7;
Algorism CIRI2;
Sequence CTCCTGCCATCTCACAAGCATGCTCTCAAGCCCTCGCTCCACAAGAGCTCTGATCGGCCTGCCATATGTAGTCTGAGCCCCATCGGCTGCTCTCCCCAGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:118134041|118134141 hsa-miR-183-5p 0 0 1
chr11:118134041|118134141 hsa-miR-183-3p 0 0 1
chr11:118134041|118134141 hsa-miR-143-5p 0 0 1
chr11:118134041|118134141 hsa-miR-143-3p 0 0 1
chr11:118134041|118134141 hsa-miR-383-5p 0 0 1
chr11:118134041|118134141 hsa-miR-383-3p 0 0 1
chr11:118134041|118134141 hsa-miR-581 0 0 1
chr11:118134041|118134141 hsa-miR-661 0 0 1
chr11:118134041|118134141 hsa-miR-939-5p 0 0 1
chr11:118134041|118134141 hsa-miR-939-3p 0 0 1
chr11:118134041|118134141 hsa-miR-1207-5p 0 0 1
chr11:118134041|118134141 hsa-miR-24 0 0 1
chr11:118134041|118134141 hsa-miR-762 1 0 0
chr11:118134041|118134141 hsa-miR-2278 0 1 0
chr11:118134041|118134141 hsa-miR-3175 0 1 0
chr11:118134041|118134141 hsa-miR-4253 1 0 0
chr11:118134041|118134141 hsa-miR-4437 1 1 0
chr11:118134041|118134141 hsa-miR-4479 1 0 0
chr11:118134041|118134141 hsa-miR-4489 1 0 0
chr11:118134041|118134141 hsa-miR-4494 1 0 0
chr11:118134041|118134141 hsa-miR-3960 1 0 0
chr11:118134041|118134141 hsa-miR-4656 1 0 0
chr11:118134041|118134141 hsa-miR-4736 1 0 0
chr11:118134041|118134141 hsa-miR-6090 1 0 0
chr11:118134041|118134141 hsa-miR-8085 0 1 0
chr11:118134041|118134141 hsa-miR-8089 1 1 0
chr11:118134041|118134141 hsa-miR-12115 1 0 0
chr11:118134041|118134141 hsa-miR-6734-5p 1 0 0
chr11:118134041|118134141 hsa-miR-3150a-3p 0 1 0
chr11:118134041|118134141 hsa-miR-6861-5p 1 0 0
chr11:118134041|118134141 hsa-miR-27a-5p 1 1 0
chr11:118134041|118134141 hsa-miR-6728-5p 0 1 0
chr11:118134041|118134141 hsa-miR-6833-5p 1 0 0
chr11:118134041|118134141 hsa-miR-1227-5p 1 0 0
chr11:118134041|118134141 hsa-miR-7114-5p 1 0 0
chr11:118134041|118134141 hsa-miR-7847-3p 1 0 0
chr11:118134041|118134141 hsa-miR-6796-5p 1 0 0
chr11:118134041|118134141 hsa-miR-6786-5p 1 0 0
chr11:118134041|118134141 hsa-miR-5088-5p 1 0 0
chr11:118134041|118134141 hsa-miR-1226-5p 1 1 0
chr11:118134041|118134141 hsa-miR-4640-5p 1 0 0
chr11:118134041|118134141 hsa-miR-6753-5p 1 0 0
chr11:118134041|118134141 hsa-miR-3127-5p 1 1 0
chr11:118134041|118134141 hsa-miR-4690-5p 1 0 0
chr11:118134041|118134141 hsa-miR-149-3p 1 0 0
chr11:118134041|118134141 hsa-miR-3616-3p 1 0 0
chr11:118134041|118134141 hsa-miR-744-5p 1 0 0
chr11:118134041|118134141 hsa-miR-2277-5p 1 0 0
chr11:118134041|118134141 hsa-miR-4283 0 1 0
chr11:118134041|118134141 hsa-miR-1199-3p 1 0 0
chr11:118134041|118134141 hsa-miR-3675-5p 0 1 0
chr11:118134041|118134141 hsa-miR-1233-5p 1 0 0
chr11:118134041|118134141 hsa-miR-4763-3p 1 0 0
chr11:118134041|118134141 hsa-miR-6812-5p 1 0 0
chr11:118134041|118134141 hsa-miR-1343-5p 1 0 0
chr11:118134041|118134141 hsa-miR-5001-5p 1 0 0
chr11:118134041|118134141 hsa-miR-6756-5p 1 0 0
chr11:118134041|118134141 hsa-miR-6797-5p 1 0 0
chr11:118134041|118134141 hsa-miR-6879-5p 1 0 0
chr11:118134041|118134141 hsa-miR-6780b-5p 1 0 0
chr11:118134041|118134141 hsa-miR-6862-5p 1 0 0
chr11:118134041|118134141 hsa-miR-10396a-5p 1 0 0
chr11:118134041|118134141 hsa-miR-10396b-5p 1 0 0
chr11:118134041|118134141 hsa-miR-328-5p 0 1 0
chr11:118134041|118134141 hsa-miR-4632-5p 1 0 0
chr11:118134041|118134141 hsa-miR-4685-5p 1 0 0
chr11:118134041|118134141 hsa-miR-6729-5p 1 0 0
chr11:118134041|118134141 hsa-miR-6795-5p 1 0 0
chr11:118134041|118134141 hsa-miR-6848-5p 1 0 0
chr11:118134041|118134141 hsa-miR-6887-5p 1 0 0
chr11:118134041|118134141 hsa-miR-6731-5p 0 1 0
chr11:118134041|118134141 hsa-miR-4646-5p 1 0 0
chr11:118134041|118134141 hsa-miR-6785-5p 1 0 0
chr11:118134041|118134141 hsa-miR-4667-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:118134041|118134141
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MPSHKHALKPSLHKSSDRPAICSLSPIGCSPQ
Nucleotide Sequence CTGCCATCTCACAAGCATGCTCTCAAGCCCTCGCTCCACAAGAGCTCTGATCGGCCTGCCATATGTAGTCTGAGCCCCATCGGCTGCTCTCCCCAG
CircID chr11:118134041|118134141
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence LGRAADGAQTTYGRPIRALVERGLESMLVRWQE
Nucleotide Sequence CTGGGGAGAGCAGCCGATGGGGCTCAGACTACATATGGCAGGCCGATCAGAGCTCTTGTGGAGCGAGGGCTTGAGAGCATGCTTGTGAGATGGCAGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab