CircRNA Information

General Information
circRNA Basic Information
CircID chr11:1186512|1186727
Strand -
CircType exon
Host Gene ENSG00000215182.8;
Algorism CIRI2;
Sequence TTTGTCTCCTACAACCAGCACAACCTCTACTACTATAACCAGCACAACTTCTGCCCCTATAAGCAGCACAACTTCCACACCACAGACCAGCACAACTTCGGCTCCTACAACCAGCACAACTTCTGGTCCTGGAACTACTTCAAGCCCTGTTCCCACCACCAGCACAACCTCTGCCCCTACAACCAGCACAACCTCTGCCCCTACAACCAGAACAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:1186512|1186727 hsa-miR-382-5p 0 0 1
chr11:1186512|1186727 hsa-miR-382-3p 0 0 1
chr11:1186512|1186727 hsa-miR-573 0 0 1
chr11:1186512|1186727 hsa-miR-411-5p 0 0 1
chr11:1186512|1186727 hsa-miR-411-3p 0 0 1
chr11:1186512|1186727 hsa-miR-298 0 1 1
chr11:1186512|1186727 hsa-miR-541-5p 0 0 1
chr11:1186512|1186727 hsa-miR-541-3p 0 0 1
chr11:1186512|1186727 hsa-miR-708-5p 0 0 1
chr11:1186512|1186727 hsa-miR-708-3p 0 0 1
chr11:1186512|1186727 hsa-miR-665 0 0 1
chr11:1186512|1186727 hsa-miR-1292-5p 0 0 1
chr11:1186512|1186727 hsa-miR-1292-3p 0 0 1
chr11:1186512|1186727 hsa-miR-486-3p 1 0 1
chr11:1186512|1186727 hsa-miR-654-5p 1 0 1
chr11:1186512|1186727 hsa-miR-28-5p 0 0 1
chr11:1186512|1186727 hsa-miR-876-3p 0 0 1
chr11:1186512|1186727 hsa-miR-1244 0 0 1
chr11:1186512|1186727 hsa-miR-323-5p 0 0 1
chr11:1186512|1186727 hsa-miR-138 0 0 1
chr11:1186512|1186727 hsa-miR-218 0 0 1
chr11:1186512|1186727 hsa-miR-453 0 0 1
chr11:1186512|1186727 hsa-miR-608 1 0 0
chr11:1186512|1186727 hsa-miR-610 1 0 0
chr11:1186512|1186727 hsa-miR-637 1 0 0
chr11:1186512|1186727 hsa-miR-658 1 0 0
chr11:1186512|1186727 hsa-miR-762 1 0 0
chr11:1186512|1186727 hsa-miR-2113 1 0 0
chr11:1186512|1186727 hsa-miR-3132 1 0 0
chr11:1186512|1186727 hsa-miR-3196 1 0 0
chr11:1186512|1186727 hsa-miR-4257 1 0 0
chr11:1186512|1186727 hsa-miR-4271 1 0 0
chr11:1186512|1186727 hsa-miR-3911 1 0 0
chr11:1186512|1186727 hsa-miR-3945 1 0 0
chr11:1186512|1186727 hsa-miR-4440 1 0 0
chr11:1186512|1186727 hsa-miR-4447 1 0 0
chr11:1186512|1186727 hsa-miR-4467 1 0 0
chr11:1186512|1186727 hsa-miR-4507 1 0 0
chr11:1186512|1186727 hsa-miR-1587 1 0 0
chr11:1186512|1186727 hsa-miR-4537 1 1 0
chr11:1186512|1186727 hsa-miR-4651 1 0 0
chr11:1186512|1186727 hsa-miR-4654 1 0 0
chr11:1186512|1186727 hsa-miR-4656 1 0 0
chr11:1186512|1186727 hsa-miR-4657 1 0 0
chr11:1186512|1186727 hsa-miR-4688 1 1 0
chr11:1186512|1186727 hsa-miR-4759 0 1 0
chr11:1186512|1186727 hsa-miR-5090 1 1 0
chr11:1186512|1186727 hsa-miR-5787 1 0 0
chr11:1186512|1186727 hsa-miR-6085 1 0 0
chr11:1186512|1186727 hsa-miR-6086 1 0 0
chr11:1186512|1186727 hsa-miR-6127 1 0 0
chr11:1186512|1186727 hsa-miR-6131 1 0 0
chr11:1186512|1186727 hsa-miR-7150 1 0 0
chr11:1186512|1186727 hsa-miR-8089 1 0 0
chr11:1186512|1186727 hsa-miR-12115 1 0 0
chr11:1186512|1186727 hsa-miR-12127 1 1 0
chr11:1186512|1186727 hsa-miR-138-5p 1 1 0
chr11:1186512|1186727 hsa-miR-150-3p 1 0 0
chr11:1186512|1186727 hsa-miR-4433b-3p 1 0 0
chr11:1186512|1186727 hsa-miR-92a-2-5p 1 0 0
chr11:1186512|1186727 hsa-miR-128-1-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6840-3p 1 0 0
chr11:1186512|1186727 hsa-miR-6747-5p 1 0 0
chr11:1186512|1186727 hsa-miR-7106-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6894-5p 1 0 0
chr11:1186512|1186727 hsa-miR-25-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6799-5p 1 0 0
chr11:1186512|1186727 hsa-miR-3692-5p 1 1 0
chr11:1186512|1186727 hsa-miR-6833-5p 1 1 0
chr11:1186512|1186727 hsa-miR-1227-5p 1 0 0
chr11:1186512|1186727 hsa-miR-7114-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6880-5p 1 0 0
chr11:1186512|1186727 hsa-miR-7847-3p 1 0 0
chr11:1186512|1186727 hsa-miR-4722-5p 1 0 0
chr11:1186512|1186727 hsa-miR-3064-5p 1 0 0
chr11:1186512|1186727 hsa-miR-7160-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6820-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6727-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6759-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6721-5p 1 1 0
chr11:1186512|1186727 hsa-miR-197-5p 1 0 0
chr11:1186512|1186727 hsa-miR-8069 1 0 0
chr11:1186512|1186727 hsa-miR-7845-5p 1 0 0
chr11:1186512|1186727 hsa-miR-3663-5p 1 1 0
chr11:1186512|1186727 hsa-miR-6742-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6871-5p 1 0 0
chr11:1186512|1186727 hsa-miR-3180-3p 1 1 0
chr11:1186512|1186727 hsa-miR-6748-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6772-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6796-5p 1 1 0
chr11:1186512|1186727 hsa-miR-6829-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6805-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6827-5p 1 0 0
chr11:1186512|1186727 hsa-miR-2467-3p 1 0 0
chr11:1186512|1186727 hsa-miR-6782-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6810-5p 1 0 0
chr11:1186512|1186727 hsa-miR-7109-5p 1 0 0
chr11:1186512|1186727 hsa-miR-1226-5p 1 0 0
chr11:1186512|1186727 hsa-miR-4640-5p 1 0 0
chr11:1186512|1186727 hsa-miR-885-3p 1 0 0
chr11:1186512|1186727 hsa-miR-1908-5p 1 0 0
chr11:1186512|1186727 hsa-let-7b-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6824-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6789-5p 1 1 0
chr11:1186512|1186727 hsa-miR-6781-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6877-5p 1 0 0
chr11:1186512|1186727 hsa-miR-423-5p 1 1 0
chr11:1186512|1186727 hsa-miR-7152-3p 1 0 0
chr11:1186512|1186727 hsa-let-7i-5p 1 0 0
chr11:1186512|1186727 hsa-let-7c-5p 1 0 0
chr11:1186512|1186727 hsa-miR-10400-5p 1 0 0
chr11:1186512|1186727 hsa-miR-1207-5p 1 0 0
chr11:1186512|1186727 hsa-miR-1233-5p 1 0 0
chr11:1186512|1186727 hsa-miR-4763-3p 1 1 0
chr11:1186512|1186727 hsa-miR-6769b-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6778-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6787-5p 0 1 0
chr11:1186512|1186727 hsa-miR-6816-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6870-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6775-5p 1 0 0
chr11:1186512|1186727 hsa-miR-3180 1 1 0
chr11:1186512|1186727 hsa-miR-6743-5p 1 1 0
chr11:1186512|1186727 hsa-miR-6752-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6769a-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6803-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6813-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6819-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6851-5p 1 0 0
chr11:1186512|1186727 hsa-miR-7110-5p 1 0 0
chr11:1186512|1186727 hsa-miR-10401-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6722-3p 1 1 0
chr11:1186512|1186727 hsa-miR-6797-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6808-5p 1 0 0
chr11:1186512|1186727 hsa-miR-7111-5p 1 0 0
chr11:1186512|1186727 hsa-miR-3620-5p 1 0 0
chr11:1186512|1186727 hsa-miR-4728-5p 1 0 0
chr11:1186512|1186727 hsa-miR-5196-5p 1 0 0
chr11:1186512|1186727 hsa-miR-1909-3p 1 0 0
chr11:1186512|1186727 hsa-miR-328-5p 1 0 0
chr11:1186512|1186727 hsa-miR-4685-5p 1 1 0
chr11:1186512|1186727 hsa-miR-4726-5p 1 0 0
chr11:1186512|1186727 hsa-miR-4749-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6735-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6738-5p 1 0 0
chr11:1186512|1186727 hsa-miR-675-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6795-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6846-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6848-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6887-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6831-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6845-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6885-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6511a-5p 1 1 0
chr11:1186512|1186727 hsa-miR-7843-5p 1 0 0
chr11:1186512|1186727 hsa-miR-377-5p 1 1 0
chr11:1186512|1186727 hsa-miR-4472 1 0 0
chr11:1186512|1186727 hsa-miR-6750-5p 1 0 0
chr11:1186512|1186727 hsa-miR-6766-5p 1 1 0
chr11:1186512|1186727 hsa-miR-323b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:1186512|1186727
ORF Type ORF1
Protein Length 71
Nucleotide Length 213
Protein Sequence LSPTTSTTSTTITSTTSAPISSTTSTPQTSTTSAPTTSTTSGPGTTSSPVPTTSTTSAPTTSTTSAPTTRT
Nucleotide Sequence TTGTCTCCTACAACCAGCACAACCTCTACTACTATAACCAGCACAACTTCTGCCCCTATAAGCAGCACAACTTCCACACCACAGACCAGCACAACTTCGGCTCCTACAACCAGCACAACTTCTGGTCCTGGAACTACTTCAAGCCCTGTTCCCACCACCAGCACAACCTCTGCCCCTACAACCAGCACAACCTCTGCCCCTACAACCAGAACA
CircID chr11:1186512|1186727
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MVLELLQALFPPPAQPLPLQPAQPLPLQPEQ
Nucleotide Sequence CTGGTCCTGGAACTACTTCAAGCCCTGTTCCCACCACCAGCACAACCTCTGCCCCTACAACCAGCACAACCTCTGCCCCTACAACCAGAACAA
CircID chr11:1186512|1186727
ORF Type ORF3
Protein Length 70
Nucleotide Length 210
Protein Sequence MVVGAEVVLVVGAEVVLVVGTGLEVVPGPEVVLVVGAEVVLVCGVEVVLLIGAEVVLVIVVEVVLVVGDK
Nucleotide Sequence CTGGTTGTAGGGGCAGAGGTTGTGCTGGTTGTAGGGGCAGAGGTTGTGCTGGTGGTGGGAACAGGGCTTGAAGTAGTTCCAGGACCAGAAGTTGTGCTGGTTGTAGGAGCCGAAGTTGTGCTGGTCTGTGGTGTGGAAGTTGTGCTGCTTATAGGGGCAGAAGTTGTGCTGGTTATAGTAGTAGAGGTTGTGCTGGTTGTAGGAGACAAA
CircID chr11:1186512|1186727
ORF Type ORF4
Protein Length 28
Nucleotide Length 84
Protein Sequence MWCGSCAAYRGRSCAGYSSRGCAGCRRQ
Nucleotide Sequence CTGTGGTGTGGAAGTTGTGCTGCTTATAGGGGCAGAAGTTGTGCTGGTTATAGTAGTAGAGGTTGTGCTGGTTGTAGGAGACAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab