CircRNA Information

General Information
circRNA Basic Information
CircID chr11:118901463|118901621
Strand -
CircType exon
Host Gene ENSG00000186174.11;
Algorism CIRI2;
Sequence CTCCCTCAGCCCAGACTGCCCCATGGGAGGGCTCAGGAGGCCCCGGCCTCCACCAAACTCCATGCCCATGGGAGTGCCCGCCAGGCCCTCACCACCAGCCATCTGCCCGGGAAACATGGCAGGATCCATCTGTCGGTGCGCCTGCATCATCCGCTCCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:118901463|118901621 hsa-miR-612 1 0 1
chr11:118901463|118901621 hsa-miR-622 0 1 1
chr11:118901463|118901621 hsa-miR-650 0 0 1
chr11:118901463|118901621 hsa-miR-1200 0 1 1
chr11:118901463|118901621 hsa-miR-1322 0 0 1
chr11:118901463|118901621 hsa-miR-1225-3p 0 0 1
chr11:118901463|118901621 hsa-miR-486-3p 1 1 1
chr11:118901463|118901621 hsa-miR-876-3p 0 0 1
chr11:118901463|118901621 hsa-miR-1233 0 0 1
chr11:118901463|118901621 hsa-miR-323-5p 0 0 1
chr11:118901463|118901621 hsa-miR-138 0 0 1
chr11:118901463|118901621 hsa-miR-1285 0 0 1
chr11:118901463|118901621 hsa-miR-663 0 0 1
chr11:118901463|118901621 hsa-miR-1268a 1 0 0
chr11:118901463|118901621 hsa-miR-1275 1 0 0
chr11:118901463|118901621 hsa-miR-2861 1 1 0
chr11:118901463|118901621 hsa-miR-3147 1 0 0
chr11:118901463|118901621 hsa-miR-3196 1 0 0
chr11:118901463|118901621 hsa-miR-4298 1 0 0
chr11:118901463|118901621 hsa-miR-3652 1 0 0
chr11:118901463|118901621 hsa-miR-1268b 1 0 0
chr11:118901463|118901621 hsa-miR-4443 0 1 0
chr11:118901463|118901621 hsa-miR-4466 1 0 0
chr11:118901463|118901621 hsa-miR-4488 1 0 0
chr11:118901463|118901621 hsa-miR-4656 0 1 0
chr11:118901463|118901621 hsa-miR-4688 1 0 0
chr11:118901463|118901621 hsa-miR-4710 0 1 0
chr11:118901463|118901621 hsa-miR-4767 1 1 0
chr11:118901463|118901621 hsa-miR-5090 1 0 0
chr11:118901463|118901621 hsa-miR-6081 1 0 0
chr11:118901463|118901621 hsa-miR-6860 1 1 0
chr11:118901463|118901621 hsa-miR-138-5p 1 1 0
chr11:118901463|118901621 hsa-miR-128-1-5p 1 0 0
chr11:118901463|118901621 hsa-miR-6765-5p 1 0 0
chr11:118901463|118901621 hsa-miR-6825-5p 1 0 0
chr11:118901463|118901621 hsa-miR-4687-3p 1 0 0
chr11:118901463|118901621 hsa-miR-1227-5p 1 0 0
chr11:118901463|118901621 hsa-miR-6089 1 1 0
chr11:118901463|118901621 hsa-miR-6880-5p 0 1 0
chr11:118901463|118901621 hsa-miR-7847-3p 0 1 0
chr11:118901463|118901621 hsa-miR-6890-5p 1 0 0
chr11:118901463|118901621 hsa-miR-6727-5p 1 0 0
chr11:118901463|118901621 hsa-miR-197-5p 1 0 0
chr11:118901463|118901621 hsa-miR-8069 1 0 0
chr11:118901463|118901621 hsa-miR-3151-5p 1 0 0
chr11:118901463|118901621 hsa-miR-3180-3p 1 0 0
chr11:118901463|118901621 hsa-miR-6514-5p 0 1 0
chr11:118901463|118901621 hsa-miR-7855-5p 0 1 0
chr11:118901463|118901621 hsa-miR-6786-5p 1 0 0
chr11:118901463|118901621 hsa-miR-6835-5p 1 0 0
chr11:118901463|118901621 hsa-miR-1226-5p 0 1 0
chr11:118901463|118901621 hsa-miR-1229-5p 1 0 0
chr11:118901463|118901621 hsa-miR-6784-5p 0 1 0
chr11:118901463|118901621 hsa-miR-3691-5p 0 1 0
chr11:118901463|118901621 hsa-let-7b-5p 1 0 0
chr11:118901463|118901621 hsa-miR-324-5p 1 0 0
chr11:118901463|118901621 hsa-miR-423-5p 1 0 0
chr11:118901463|118901621 hsa-miR-3681-5p 0 1 0
chr11:118901463|118901621 hsa-miR-4750-5p 1 0 0
chr11:118901463|118901621 hsa-miR-3675-5p 1 0 0
chr11:118901463|118901621 hsa-miR-6722-5p 0 1 0
chr11:118901463|118901621 hsa-miR-4763-3p 1 0 0
chr11:118901463|118901621 hsa-miR-6816-5p 1 0 0
chr11:118901463|118901621 hsa-miR-3180 1 0 0
chr11:118901463|118901621 hsa-miR-6743-5p 1 0 0
chr11:118901463|118901621 hsa-miR-6756-5p 1 0 0
chr11:118901463|118901621 hsa-miR-6803-5p 1 0 0
chr11:118901463|118901621 hsa-miR-6751-5p 1 0 0
chr11:118901463|118901621 hsa-miR-10396b-5p 1 0 0
chr11:118901463|118901621 hsa-miR-1237-5p 1 0 0
chr11:118901463|118901621 hsa-miR-328-5p 1 0 0
chr11:118901463|118901621 hsa-miR-4632-5p 0 1 0
chr11:118901463|118901621 hsa-miR-4649-5p 1 0 0
chr11:118901463|118901621 hsa-miR-4749-5p 1 0 0
chr11:118901463|118901621 hsa-miR-6848-5p 1 0 0
chr11:118901463|118901621 hsa-miR-3187-5p 1 0 0
chr11:118901463|118901621 hsa-miR-6791-3p 0 1 0
chr11:118901463|118901621 hsa-miR-6791-5p 1 0 0
chr11:118901463|118901621 hsa-miR-6829-3p 0 1 0
chr11:118901463|118901621 hsa-miR-6751-3p 0 1 0
chr11:118901463|118901621 hsa-miR-6811-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:118901463|118901621
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MPHGRAQEAPASTKLHAHGSARQALTTSHLPGKHGRIHLSVRLHHPLH
Nucleotide Sequence CTGCCCCATGGGAGGGCTCAGGAGGCCCCGGCCTCCACCAAACTCCATGCCCATGGGAGTGCCCGCCAGGCCCTCACCACCAGCCATCTGCCCGGGAAACATGGCAGGATCCATCTGTCGGTGCGCCTGCATCATCCGCTCCAT
CircID chr11:118901463|118901621
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MGGLRRPRPPPNSMPMGVPARPSPPAICPGNMAGSICRCACIIRS
Nucleotide Sequence ATGGGAGGGCTCAGGAGGCCCCGGCCTCCACCAAACTCCATGCCCATGGGAGTGCCCGCCAGGCCCTCACCACCAGCCATCTGCCCGGGAAACATGGCAGGATCCATCTGTCGGTGCGCCTGCATCATCCGCTCC
CircID chr11:118901463|118901621
ORF Type ORF3
Protein Length 53
Nucleotide Length 159
Protein Sequence MERMMQAHRQMDPAMFPGQMAGGEGLAGTPMGMEFGGGRGLLSPPMGQSGLRE
Nucleotide Sequence ATGGAGCGGATGATGCAGGCGCACCGACAGATGGATCCTGCCATGTTTCCCGGGCAGATGGCTGGTGGTGAGGGCCTGGCGGGCACTCCCATGGGCATGGAGTTTGGTGGAGGCCGGGGCCTCCTGAGCCCTCCCATGGGGCAGTCTGGGCTGAGGGAG
CircID chr11:118901463|118901621
ORF Type ORF4
Protein Length 29
Nucleotide Length 90
Protein Sequence MPCFPGRWLVVRAWRALPWAWSLVEAGAS
Nucleotide Sequence CTGCCATGTTTCCCGGGCAGATGGCTGGTGGTGAGGGCCTGGCGGGCACTCCCATGGGCATGGAGTTTGGTGGAGGCCGGGGCCTCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab