CircRNA Information

General Information
circRNA Basic Information
CircID chr11:118998291|118998558
Strand +
CircType exon
Host Gene ENSG00000186166.7;
Algorism CIRI2;
Sequence CGTCAGGTTTCCATGGCTCAGGTGTTCCCGCACCTCACAGCCGCAGCACAGGCACCAGCAGCATCGCTCGTGTTCGGGCACATAGCGCTCCACCTGAGCGGCGCGGATGGCCTTGCGGGCCGCCTCCACCTGCCGCAGAGAGGCCAAGTAGAACCCCGAGGGGGACCCCCAAATCACACCCGCTCTGGCCTTCACTGACCTGCCCCGCACTCCCATCCCATCTCTAGCCTTGCCTCCGCACCTGGGGCAGGAGCCTCTCCAAAGCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:118998291|118998558 hsa-miR-185-5p 0 0 1
chr11:118998291|118998558 hsa-miR-185-3p 0 0 1
chr11:118998291|118998558 hsa-miR-620 0 0 1
chr11:118998291|118998558 hsa-miR-650 1 1 1
chr11:118998291|118998558 hsa-miR-658 1 1 1
chr11:118998291|118998558 hsa-miR-675-5p 0 0 1
chr11:118998291|118998558 hsa-miR-675-3p 0 0 1
chr11:118998291|118998558 hsa-miR-890 0 0 1
chr11:118998291|118998558 hsa-miR-744-5p 0 0 1
chr11:118998291|118998558 hsa-miR-744-3p 0 0 1
chr11:118998291|118998558 hsa-miR-937-5p 0 0 1
chr11:118998291|118998558 hsa-miR-937-3p 0 0 1
chr11:118998291|118998558 hsa-miR-1294 0 0 1
chr11:118998291|118998558 hsa-miR-1270 0 0 1
chr11:118998291|118998558 hsa-miR-1275 0 0 1
chr11:118998291|118998558 hsa-miR-125a-3p 0 0 1
chr11:118998291|118998558 hsa-miR-486-3p 0 1 1
chr11:118998291|118998558 hsa-miR-615-5p 1 1 1
chr11:118998291|118998558 hsa-miR-455-5p 0 0 1
chr11:118998291|118998558 hsa-miR-324-3p 0 0 1
chr11:118998291|118998558 hsa-miR-550 0 0 1
chr11:118998291|118998558 hsa-miR-138 0 0 1
chr11:118998291|118998558 hsa-miR-768-5p 0 0 1
chr11:118998291|118998558 hsa-miR-886-3p 0 0 1
chr11:118998291|118998558 hsa-miR-602 1 1 0
chr11:118998291|118998558 hsa-miR-608 1 0 0
chr11:118998291|118998558 hsa-miR-663a 1 0 0
chr11:118998291|118998558 hsa-miR-762 1 0 0
chr11:118998291|118998558 hsa-miR-1322 1 0 0
chr11:118998291|118998558 hsa-miR-1976 0 1 0
chr11:118998291|118998558 hsa-miR-3132 1 0 0
chr11:118998291|118998558 hsa-miR-3147 1 0 0
chr11:118998291|118998558 hsa-miR-3188 0 1 0
chr11:118998291|118998558 hsa-miR-3612 1 1 0
chr11:118998291|118998558 hsa-miR-3621 1 0 0
chr11:118998291|118998558 hsa-miR-3652 1 0 0
chr11:118998291|118998558 hsa-miR-3665 1 1 0
chr11:118998291|118998558 hsa-miR-3911 1 0 0
chr11:118998291|118998558 hsa-miR-4443 1 0 0
chr11:118998291|118998558 hsa-miR-3135b 1 0 0
chr11:118998291|118998558 hsa-miR-4466 1 1 0
chr11:118998291|118998558 hsa-miR-4505 1 0 0
chr11:118998291|118998558 hsa-miR-2392 1 1 0
chr11:118998291|118998558 hsa-miR-4507 1 0 0
chr11:118998291|118998558 hsa-miR-4514 1 0 0
chr11:118998291|118998558 hsa-miR-3960 1 1 0
chr11:118998291|118998558 hsa-miR-4651 1 0 0
chr11:118998291|118998558 hsa-miR-4706 1 0 0
chr11:118998291|118998558 hsa-miR-4736 0 1 0
chr11:118998291|118998558 hsa-miR-4754 1 0 0
chr11:118998291|118998558 hsa-miR-4767 1 0 0
chr11:118998291|118998558 hsa-miR-5090 1 1 0
chr11:118998291|118998558 hsa-miR-6088 1 0 0
chr11:118998291|118998558 hsa-miR-6126 1 1 0
chr11:118998291|118998558 hsa-miR-6127 1 0 0
chr11:118998291|118998558 hsa-miR-6132 1 1 0
chr11:118998291|118998558 hsa-miR-7150 1 0 0
chr11:118998291|118998558 hsa-miR-7974 1 1 0
chr11:118998291|118998558 hsa-miR-8072 1 0 0
chr11:118998291|118998558 hsa-miR-12114 0 1 0
chr11:118998291|118998558 hsa-miR-12127 0 1 0
chr11:118998291|118998558 hsa-miR-12131 0 1 0
chr11:118998291|118998558 hsa-miR-138-5p 1 1 0
chr11:118998291|118998558 hsa-miR-4433b-3p 1 1 0
chr11:118998291|118998558 hsa-miR-15a-3p 0 1 0
chr11:118998291|118998558 hsa-miR-504-3p 1 1 0
chr11:118998291|118998558 hsa-miR-6809-5p 1 1 0
chr11:118998291|118998558 hsa-miR-4433a-3p 1 0 0
chr11:118998291|118998558 hsa-miR-6728-5p 1 1 0
chr11:118998291|118998558 hsa-miR-6833-5p 1 0 0
chr11:118998291|118998558 hsa-miR-3934-5p 1 1 0
chr11:118998291|118998558 hsa-miR-7114-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6089 1 0 0
chr11:118998291|118998558 hsa-miR-6807-5p 0 1 0
chr11:118998291|118998558 hsa-miR-6757-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6880-5p 1 1 0
chr11:118998291|118998558 hsa-miR-7847-3p 1 1 0
chr11:118998291|118998558 hsa-miR-4695-5p 1 0 0
chr11:118998291|118998558 hsa-miR-4755-3p 1 0 0
chr11:118998291|118998558 hsa-miR-6890-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6727-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6721-5p 0 1 0
chr11:118998291|118998558 hsa-miR-197-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6871-5p 1 1 0
chr11:118998291|118998558 hsa-miR-3180-3p 1 0 0
chr11:118998291|118998558 hsa-miR-6796-5p 0 1 0
chr11:118998291|118998558 hsa-miR-4697-3p 1 0 0
chr11:118998291|118998558 hsa-miR-6732-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6805-5p 1 0 0
chr11:118998291|118998558 hsa-miR-2467-3p 1 0 0
chr11:118998291|118998558 hsa-miR-6782-5p 1 0 0
chr11:118998291|118998558 hsa-miR-5006-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6850-5p 1 0 0
chr11:118998291|118998558 hsa-miR-3934-3p 0 1 0
chr11:118998291|118998558 hsa-miR-1226-5p 1 0 0
chr11:118998291|118998558 hsa-miR-1229-5p 1 0 0
chr11:118998291|118998558 hsa-miR-4640-5p 1 0 0
chr11:118998291|118998558 hsa-miR-3127-5p 1 0 0
chr11:118998291|118998558 hsa-miR-92b-5p 1 0 0
chr11:118998291|118998558 hsa-miR-4787-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6802-5p 0 1 0
chr11:118998291|118998558 hsa-miR-3922-5p 1 1 0
chr11:118998291|118998558 hsa-miR-4708-3p 1 1 0
chr11:118998291|118998558 hsa-miR-6811-3p 0 1 0
chr11:118998291|118998558 hsa-miR-10400-5p 1 0 0
chr11:118998291|118998558 hsa-miR-1207-5p 1 0 0
chr11:118998291|118998558 hsa-miR-1233-5p 1 0 0
chr11:118998291|118998558 hsa-miR-4763-3p 1 1 0
chr11:118998291|118998558 hsa-miR-6778-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6787-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6812-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6816-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6893-5p 1 1 0
chr11:118998291|118998558 hsa-miR-6775-5p 1 1 0
chr11:118998291|118998558 hsa-miR-1343-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6743-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6752-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6756-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6803-5p 1 1 0
chr11:118998291|118998558 hsa-miR-6819-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6851-5p 1 1 0
chr11:118998291|118998558 hsa-miR-7110-5p 1 0 0
chr11:118998291|118998558 hsa-miR-10401-5p 0 1 0
chr11:118998291|118998558 hsa-miR-6722-3p 1 0 0
chr11:118998291|118998558 hsa-miR-6751-5p 1 1 0
chr11:118998291|118998558 hsa-miR-6797-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6808-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6879-5p 1 0 0
chr11:118998291|118998558 hsa-miR-3620-5p 1 0 0
chr11:118998291|118998558 hsa-miR-4728-5p 1 0 0
chr11:118998291|118998558 hsa-miR-5196-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6780b-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6836-5p 1 0 0
chr11:118998291|118998558 hsa-miR-10396a-5p 1 0 0
chr11:118998291|118998558 hsa-miR-10396b-5p 1 0 0
chr11:118998291|118998558 hsa-miR-1237-5p 1 0 0
chr11:118998291|118998558 hsa-miR-1909-3p 1 0 0
chr11:118998291|118998558 hsa-miR-328-5p 1 0 0
chr11:118998291|118998558 hsa-miR-4685-5p 1 0 0
chr11:118998291|118998558 hsa-miR-4725-3p 1 0 0
chr11:118998291|118998558 hsa-miR-4726-5p 1 0 0
chr11:118998291|118998558 hsa-miR-4749-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6729-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6858-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6845-5p 1 0 0
chr11:118998291|118998558 hsa-miR-4769-5p 1 0 0
chr11:118998291|118998558 hsa-miR-6511b-5p 1 0 0
chr11:118998291|118998558 hsa-miR-3085-5p 1 0 0
chr11:118998291|118998558 hsa-miR-3940-5p 1 0 0
chr11:118998291|118998558 hsa-miR-1271-3p 0 1 0
chr11:118998291|118998558 hsa-miR-6785-5p 1 0 0
chr11:118998291|118998558 hsa-miR-550a-5p 1 0 0
chr11:118998291|118998558 hsa-miR-4757-5p 1 1 0
chr11:118998291|118998558 hsa-miR-6744-3p 1 1 0
chr11:118998291|118998558 hsa-miR-3622b-3p 0 1 0
chr11:118998291|118998558 hsa-miR-7157-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:118998291|118998558
ORF Type ORF1
Protein Length 61
Nucleotide Length 186
Protein Sequence MAQVFPHLTAAAQAPAASLVFGHIALHLSGADGLAGRLHLPQRGQVEPRGGPPNHTRSGLH
Nucleotide Sequence ATGGCTCAGGTGTTCCCGCACCTCACAGCCGCAGCACAGGCACCAGCAGCATCGCTCGTGTTCGGGCACATAGCGCTCCACCTGAGCGGCGCGGATGGCCTTGCGGGCCGCCTCCACCTGCCGCAGAGAGGCCAAGTAGAACCCCGAGGGGGACCCCCAAATCACACCCGCTCTGGCCTTCACTGA
CircID chr11:118998291|118998558
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MAFTDLPRTPIPSLALPPHLGQEPLQSL
Nucleotide Sequence CTGGCCTTCACTGACCTGCCCCGCACTCCCATCCCATCTCTAGCCTTGCCTCCGCACCTGGGGCAGGAGCCTCTCCAAAGCCTC
CircID chr11:118998291|118998558
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MGVPLGVLLGLSAAGGGGPQGHPRRSGGALCARTRAMLLVPVLRL
Nucleotide Sequence TTGGGGGTCCCCCTCGGGGTTCTACTTGGCCTCTCTGCGGCAGGTGGAGGCGGCCCGCAAGGCCATCCGCGCCGCTCAGGTGGAGCGCTATGTGCCCGAACACGAGCGATGCTGCTGGTGCCTGTGCTGCGGCTGTGA
CircID chr11:118998291|118998558
ORF Type ORF4
Protein Length 72
Nucleotide Length 216
Protein Sequence MGVRGRSVKARAGVIWGSPSGFYLASLRQVEAARKAIRAAQVERYVPEHERCCWCLCCGCEVREHLSHGNLT
Nucleotide Sequence ATGGGAGTGCGGGGCAGGTCAGTGAAGGCCAGAGCGGGTGTGATTTGGGGGTCCCCCTCGGGGTTCTACTTGGCCTCTCTGCGGCAGGTGGAGGCGGCCCGCAAGGCCATCCGCGCCGCTCAGGTGGAGCGCTATGTGCCCGAACACGAGCGATGCTGCTGGTGCCTGTGCTGCGGCTGTGAGGTGCGGGAACACCTGAGCCATGGAAACCTGACG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab