CircRNA Information

General Information
circRNA Basic Information
CircID chr11:119021959|119022175
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTTGTCTTTACTAGAAACATGAAATTAGCCAGGCGTGGTGGCACATGCATCCAATCCCAGCTACTCAGGAGGCTGAGCCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTACAGCGAGCCAAGATCGCATCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAACAAACAAACAAAAAAAGTAATACTCTACTATGCTTCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:119021959|119022175 hsa-miR-122-5p 0 0 1
chr11:119021959|119022175 hsa-miR-122-3p 0 0 1
chr11:119021959|119022175 hsa-miR-130a-5p 0 0 1
chr11:119021959|119022175 hsa-miR-130a-3p 0 0 1
chr11:119021959|119022175 hsa-miR-149-5p 0 0 1
chr11:119021959|119022175 hsa-miR-149-3p 0 0 1
chr11:119021959|119022175 hsa-miR-301a-5p 0 0 1
chr11:119021959|119022175 hsa-miR-301a-3p 0 0 1
chr11:119021959|119022175 hsa-miR-130b-5p 0 0 1
chr11:119021959|119022175 hsa-miR-130b-3p 0 0 1
chr11:119021959|119022175 hsa-miR-325 0 0 1
chr11:119021959|119022175 hsa-miR-496 0 0 1
chr11:119021959|119022175 hsa-miR-498-5p 0 0 1
chr11:119021959|119022175 hsa-miR-498-3p 0 0 1
chr11:119021959|119022175 hsa-miR-411-5p 0 0 1
chr11:119021959|119022175 hsa-miR-411-3p 0 0 1
chr11:119021959|119022175 hsa-miR-454-5p 0 0 1
chr11:119021959|119022175 hsa-miR-454-3p 0 0 1
chr11:119021959|119022175 hsa-miR-301b-5p 0 0 1
chr11:119021959|119022175 hsa-miR-301b-3p 0 0 1
chr11:119021959|119022175 hsa-miR-1227-5p 0 0 1
chr11:119021959|119022175 hsa-miR-1227-3p 0 0 1
chr11:119021959|119022175 hsa-miR-1200 0 0 1
chr11:119021959|119022175 hsa-miR-1322 0 0 1
chr11:119021959|119022175 hsa-miR-129-5p 0 0 1
chr11:119021959|119022175 hsa-miR-139-3p 0 0 1
chr11:119021959|119022175 hsa-miR-628-3p 0 0 1
chr11:119021959|119022175 hsa-miR-455-5p 0 0 1
chr11:119021959|119022175 hsa-miR-720 0 0 1
chr11:119021959|119022175 hsa-miR-24 0 0 1
chr11:119021959|119022175 hsa-miR-892b 1 1 0
chr11:119021959|119022175 hsa-miR-1303 1 1 0
chr11:119021959|119022175 hsa-miR-1538 1 0 0
chr11:119021959|119022175 hsa-miR-3135a 1 1 0
chr11:119021959|119022175 hsa-miR-3652 0 1 0
chr11:119021959|119022175 hsa-miR-4430 0 1 0
chr11:119021959|119022175 hsa-miR-3135b 0 1 0
chr11:119021959|119022175 hsa-miR-4654 0 1 0
chr11:119021959|119022175 hsa-miR-4682 1 0 0
chr11:119021959|119022175 hsa-miR-143-5p 0 1 0
chr11:119021959|119022175 hsa-miR-504-3p 0 1 0
chr11:119021959|119022175 hsa-miR-4665-3p 1 0 0
chr11:119021959|119022175 hsa-miR-6765-5p 1 0 0
chr11:119021959|119022175 hsa-miR-6861-5p 1 0 0
chr11:119021959|119022175 hsa-miR-27a-5p 1 0 0
chr11:119021959|119022175 hsa-miR-3934-3p 1 0 0
chr11:119021959|119022175 hsa-miR-5001-3p 0 1 0
chr11:119021959|119022175 hsa-miR-5580-5p 0 1 0
chr11:119021959|119022175 hsa-miR-660-3p 0 1 0
chr11:119021959|119022175 hsa-miR-1244 0 1 0
chr11:119021959|119022175 hsa-miR-6831-5p 1 0 0
chr11:119021959|119022175 hsa-miR-3116 1 0 0
chr11:119021959|119022175 hsa-miR-6791-3p 1 1 0
chr11:119021959|119022175 hsa-miR-6877-3p 1 0 0
chr11:119021959|119022175 hsa-miR-6829-3p 0 1 0
chr11:119021959|119022175 hsa-miR-619-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:119021959|119022175
ORF Type ORF1
Protein Length 66
Nucleotide Length 198
Protein Sequence MKLARRGGTCIQSQLLRRLSQENRLNPGGRGYSEPRSHHCTPAWATRAKLRLKNKQTKKVILYYAS
Nucleotide Sequence ATGAAATTAGCCAGGCGTGGTGGCACATGCATCCAATCCCAGCTACTCAGGAGGCTGAGCCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTACAGCGAGCCAAGATCGCATCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAACAAACAAACAAAAAAAGTAATACTCTACTATGCTTCA

CircID chr11:119021959|119022175
ORF Type ORF2
Protein Length 57
Nucleotide Length 171
Protein Sequence MHPIPATQEAEPGESLEPGRQRLQRAKIASLHSSLGNKSETPSQKQTNKKSNTLLCF
Nucleotide Sequence ATGCATCCAATCCCAGCTACTCAGGAGGCTGAGCCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTACAGCGAGCCAAGATCGCATCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAACAAACAAACAAAAAAAGTAATACTCTACTATGCTTC

CircID chr11:119021959|119022175
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MLPRLECNDAILARCNLCLPGSSDSPGSAS
Nucleotide Sequence TTGTTGCCCAGGCTGGAGTGCAATGATGCGATCTTGGCTCGCTGTAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGGCTCAGCCTCCTGA

CircID chr11:119021959|119022175
ORF Type ORF4
Protein Length 41
Nucleotide Length 126
Protein Sequence MFVFETEFRSCCPGWSAMMRSWLAVTSASRVQAILLAQPPE
Nucleotide Sequence TTGTTTGTTTTTGAGACGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGATGCGATCTTGGCTCGCTGTAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGGCTCAGCCTCCTGAGTAG

CircID chr11:119021959|119022175
ORF Type ORF5
Protein Length 35
Nucleotide Length 105
Protein Sequence MPPGFKRFSWLSLLSSWDWMHVPPRLANFMFLVKT
Nucleotide Sequence CTGCCTCCCGGGTTCAAGCGATTCTCCTGGCTCAGCCTCCTGAGTAGCTGGGATTGGATGCATGTGCCACCACGCCTGGCTAATTTCATGTTTCTAGTAAAGACA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites