CircRNA Information

General Information
circRNA Basic Information
CircID chr11:119047992|119048328
Strand -
CircType exon
Host Gene ENSG00000149428.17;
Algorism CIRI2;
Sequence AGCCGTTCGGGCCACTTCTTGCGCTCCTCTACCCGAAAAAACAGCCCTTGGCACAGCTTCCTCAGCTCAGCCAGCTTCTCCTTCAACATCTGATGGATGTGCGATTGGGCAGAGGGGTGGAAGGGACGACAGCAGAGCCTGGAGTCAGCCCCATGTCCTTCTTTATGGGCTCAAGCCCCAGCTCTTCTCTCTCTCTGACCCTGGGAGAGGAAGGAGAGCTCCCACTCCACCTGCCATGTCCTGAGAGGCCCCTCACCACTGTGGTGGCTCCAACACCCTCATCCTCCAGCCAGGTGGATGCGGCGCTGAGCTTCCCAGAGATCTCCTCACGCTGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:119047992|119048328 hsa-miR-122-5p 0 0 1
chr11:119047992|119048328 hsa-miR-122-3p 0 0 1
chr11:119047992|119048328 hsa-miR-150-5p 0 0 1
chr11:119047992|119048328 hsa-miR-150-3p 0 0 1
chr11:119047992|119048328 hsa-miR-186-5p 0 0 1
chr11:119047992|119048328 hsa-miR-186-3p 0 0 1
chr11:119047992|119048328 hsa-miR-326 0 0 1
chr11:119047992|119048328 hsa-miR-345-5p 0 0 1
chr11:119047992|119048328 hsa-miR-345-3p 0 0 1
chr11:119047992|119048328 hsa-miR-484 0 1 1
chr11:119047992|119048328 hsa-miR-503-5p 0 0 1
chr11:119047992|119048328 hsa-miR-503-3p 0 0 1
chr11:119047992|119048328 hsa-miR-558 0 0 1
chr11:119047992|119048328 hsa-miR-609 0 0 1
chr11:119047992|119048328 hsa-miR-626 0 0 1
chr11:119047992|119048328 hsa-miR-653-5p 0 0 1
chr11:119047992|119048328 hsa-miR-653-3p 0 0 1
chr11:119047992|119048328 hsa-miR-765 0 0 1
chr11:119047992|119048328 hsa-miR-877-5p 0 0 1
chr11:119047992|119048328 hsa-miR-877-3p 0 0 1
chr11:119047992|119048328 hsa-miR-760 0 0 1
chr11:119047992|119048328 hsa-miR-920 0 0 1
chr11:119047992|119048328 hsa-miR-1227-5p 0 0 1
chr11:119047992|119048328 hsa-miR-1227-3p 0 0 1
chr11:119047992|119048328 hsa-miR-663b 0 1 1
chr11:119047992|119048328 hsa-miR-1253 0 0 1
chr11:119047992|119048328 hsa-miR-1255a 0 0 1
chr11:119047992|119048328 hsa-miR-1266-5p 0 0 1
chr11:119047992|119048328 hsa-miR-1266-3p 0 0 1
chr11:119047992|119048328 hsa-miR-1252-5p 0 0 1
chr11:119047992|119048328 hsa-miR-1252-3p 0 0 1
chr11:119047992|119048328 hsa-miR-1225-3p 0 0 1
chr11:119047992|119048328 hsa-miR-532-3p 0 0 1
chr11:119047992|119048328 hsa-miR-423-5p 0 0 1
chr11:119047992|119048328 hsa-miR-508-5p 0 0 1
chr11:119047992|119048328 hsa-miR-140-3p 0 0 1
chr11:119047992|119048328 hsa-miR-1207-5p 0 0 1
chr11:119047992|119048328 hsa-miR-324-3p 0 0 1
chr11:119047992|119048328 hsa-miR-330-5p 0 0 1
chr11:119047992|119048328 hsa-miR-337-5p 0 0 1
chr11:119047992|119048328 hsa-miR-1233 0 0 1
chr11:119047992|119048328 hsa-miR-128 0 0 1
chr11:119047992|119048328 hsa-miR-1255b 0 0 1
chr11:119047992|119048328 hsa-miR-638 1 0 0
chr11:119047992|119048328 hsa-miR-762 1 1 0
chr11:119047992|119048328 hsa-miR-2861 1 0 0
chr11:119047992|119048328 hsa-miR-3125 0 1 0
chr11:119047992|119048328 hsa-miR-3132 1 1 0
chr11:119047992|119048328 hsa-miR-3154 1 0 0
chr11:119047992|119048328 hsa-miR-3155a 0 1 0
chr11:119047992|119048328 hsa-miR-3183 0 1 0
chr11:119047992|119048328 hsa-miR-320e 0 1 0
chr11:119047992|119048328 hsa-miR-3197 1 0 0
chr11:119047992|119048328 hsa-miR-4303 0 1 0
chr11:119047992|119048328 hsa-miR-3652 1 1 0
chr11:119047992|119048328 hsa-miR-4429 1 1 0
chr11:119047992|119048328 hsa-miR-4430 1 1 0
chr11:119047992|119048328 hsa-miR-4436a 1 1 0
chr11:119047992|119048328 hsa-miR-4440 1 0 0
chr11:119047992|119048328 hsa-miR-3135b 1 1 0
chr11:119047992|119048328 hsa-miR-4466 1 0 0
chr11:119047992|119048328 hsa-miR-4476 1 0 0
chr11:119047992|119048328 hsa-miR-4478 1 1 0
chr11:119047992|119048328 hsa-miR-3155b 0 1 0
chr11:119047992|119048328 hsa-miR-4487 1 1 0
chr11:119047992|119048328 hsa-miR-4498 1 0 0
chr11:119047992|119048328 hsa-miR-2392 1 0 0
chr11:119047992|119048328 hsa-miR-4516 0 1 0
chr11:119047992|119048328 hsa-miR-4644 0 1 0
chr11:119047992|119048328 hsa-miR-4656 1 1 0
chr11:119047992|119048328 hsa-miR-4663 0 1 0
chr11:119047992|119048328 hsa-miR-4688 1 0 0
chr11:119047992|119048328 hsa-miR-4689 0 1 0
chr11:119047992|119048328 hsa-miR-4706 1 0 0
chr11:119047992|119048328 hsa-miR-4710 1 0 0
chr11:119047992|119048328 hsa-miR-4741 1 0 0
chr11:119047992|119048328 hsa-miR-4784 1 1 0
chr11:119047992|119048328 hsa-miR-5194 1 0 0
chr11:119047992|119048328 hsa-miR-5705 1 0 0
chr11:119047992|119048328 hsa-miR-5787 1 0 0
chr11:119047992|119048328 hsa-miR-6071 0 1 0
chr11:119047992|119048328 hsa-miR-6133 1 1 0
chr11:119047992|119048328 hsa-miR-7150 0 1 0
chr11:119047992|119048328 hsa-miR-8080 0 1 0
chr11:119047992|119048328 hsa-miR-8089 1 0 0
chr11:119047992|119048328 hsa-miR-12114 0 1 0
chr11:119047992|119048328 hsa-miR-12115 1 0 0
chr11:119047992|119048328 hsa-miR-12118 0 1 0
chr11:119047992|119048328 hsa-miR-128-3p 0 1 0
chr11:119047992|119048328 hsa-miR-4433b-3p 1 0 0
chr11:119047992|119048328 hsa-miR-6734-5p 1 0 0
chr11:119047992|119048328 hsa-miR-4731-5p 1 0 0
chr11:119047992|119048328 hsa-miR-504-3p 1 0 0
chr11:119047992|119048328 hsa-miR-3194-3p 0 1 0
chr11:119047992|119048328 hsa-miR-671-5p 1 0 0
chr11:119047992|119048328 hsa-miR-149-5p 1 0 0
chr11:119047992|119048328 hsa-miR-3150a-3p 0 1 0
chr11:119047992|119048328 hsa-miR-6861-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6894-5p 1 1 0
chr11:119047992|119048328 hsa-miR-4687-3p 1 0 0
chr11:119047992|119048328 hsa-miR-6799-5p 1 0 0
chr11:119047992|119048328 hsa-miR-5187-5p 0 1 0
chr11:119047992|119048328 hsa-miR-6880-5p 1 1 0
chr11:119047992|119048328 hsa-miR-7847-3p 1 1 0
chr11:119047992|119048328 hsa-miR-3064-5p 0 1 0
chr11:119047992|119048328 hsa-miR-3677-5p 0 1 0
chr11:119047992|119048328 hsa-miR-505-5p 0 1 0
chr11:119047992|119048328 hsa-miR-7160-5p 1 1 0
chr11:119047992|119048328 hsa-miR-197-5p 1 1 0
chr11:119047992|119048328 hsa-miR-6873-3p 1 0 0
chr11:119047992|119048328 hsa-miR-6845-3p 0 1 0
chr11:119047992|119048328 hsa-miR-185-3p 1 1 0
chr11:119047992|119048328 hsa-miR-6827-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6798-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6760-5p 0 1 0
chr11:119047992|119048328 hsa-miR-6765-3p 1 1 0
chr11:119047992|119048328 hsa-miR-6728-3p 0 1 0
chr11:119047992|119048328 hsa-miR-3150b-3p 1 1 0
chr11:119047992|119048328 hsa-miR-6888-5p 0 1 0
chr11:119047992|119048328 hsa-miR-1226-5p 1 0 0
chr11:119047992|119048328 hsa-miR-3944-3p 1 0 0
chr11:119047992|119048328 hsa-miR-1229-5p 1 0 0
chr11:119047992|119048328 hsa-miR-3127-5p 1 0 0
chr11:119047992|119048328 hsa-miR-7161-3p 0 1 0
chr11:119047992|119048328 hsa-miR-3667-3p 0 1 0
chr11:119047992|119048328 hsa-miR-6771-5p 1 0 0
chr11:119047992|119048328 hsa-miR-485-5p 0 1 0
chr11:119047992|119048328 hsa-miR-6789-5p 1 0 0
chr11:119047992|119048328 hsa-miR-4715-5p 0 1 0
chr11:119047992|119048328 hsa-miR-6878-5p 0 1 0
chr11:119047992|119048328 hsa-miR-4778-3p 0 1 0
chr11:119047992|119048328 hsa-miR-2276-5p 0 1 0
chr11:119047992|119048328 hsa-miR-6801-5p 0 1 0
chr11:119047992|119048328 hsa-miR-4750-5p 1 0 0
chr11:119047992|119048328 hsa-miR-216a-3p 0 1 0
chr11:119047992|119048328 hsa-miR-937-3p 1 0 0
chr11:119047992|119048328 hsa-miR-6802-3p 0 1 0
chr11:119047992|119048328 hsa-miR-3675-5p 0 1 0
chr11:119047992|119048328 hsa-miR-7158-5p 0 1 0
chr11:119047992|119048328 hsa-miR-1233-5p 1 0 0
chr11:119047992|119048328 hsa-miR-1273h-5p 0 1 0
chr11:119047992|119048328 hsa-miR-4763-3p 1 0 0
chr11:119047992|119048328 hsa-miR-6778-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6812-5p 1 0 0
chr11:119047992|119048328 hsa-miR-1343-5p 1 0 0
chr11:119047992|119048328 hsa-miR-5001-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6737-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6743-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6752-5p 1 1 0
chr11:119047992|119048328 hsa-miR-6756-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6803-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6813-5p 1 1 0
chr11:119047992|119048328 hsa-miR-6819-5p 1 0 0
chr11:119047992|119048328 hsa-miR-7107-5p 1 0 0
chr11:119047992|119048328 hsa-miR-1249-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6763-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6875-5p 1 0 0
chr11:119047992|119048328 hsa-miR-3620-5p 1 0 0
chr11:119047992|119048328 hsa-miR-5196-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6780b-5p 1 0 0
chr11:119047992|119048328 hsa-miR-328-5p 1 0 0
chr11:119047992|119048328 hsa-miR-4632-5p 1 0 0
chr11:119047992|119048328 hsa-miR-4649-5p 1 0 0
chr11:119047992|119048328 hsa-miR-4745-5p 0 1 0
chr11:119047992|119048328 hsa-miR-6848-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6858-5p 1 1 0
chr11:119047992|119048328 hsa-miR-6883-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6831-5p 1 0 0
chr11:119047992|119048328 hsa-miR-939-5p 1 1 0
chr11:119047992|119048328 hsa-miR-365b-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6856-5p 0 1 0
chr11:119047992|119048328 hsa-miR-1914-3p 1 0 0
chr11:119047992|119048328 hsa-miR-6736-5p 1 0 0
chr11:119047992|119048328 hsa-miR-3679-5p 1 0 0
chr11:119047992|119048328 hsa-miR-4646-5p 0 1 0
chr11:119047992|119048328 hsa-miR-3184-5p 1 1 0
chr11:119047992|119048328 hsa-miR-6724-5p 1 0 0
chr11:119047992|119048328 hsa-miR-4757-5p 0 1 0
chr11:119047992|119048328 hsa-miR-320a-3p 1 0 0
chr11:119047992|119048328 hsa-miR-320b 1 0 0
chr11:119047992|119048328 hsa-miR-3928-5p 0 1 0
chr11:119047992|119048328 hsa-miR-3059-5p 0 1 0
chr11:119047992|119048328 hsa-miR-6744-3p 0 1 0
chr11:119047992|119048328 hsa-miR-6500-5p 1 0 0
chr11:119047992|119048328 hsa-miR-6764-5p 0 1 0
chr11:119047992|119048328 hsa-miR-6504-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:119047992|119048328
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MCDWAEGWKGRQQSLESAPCPSLWAQAPALLSL
Nucleotide Sequence ATGTGCGATTGGGCAGAGGGGTGGAAGGGACGACAGCAGAGCCTGGAGTCAGCCCCATGTCCTTCTTTATGGGCTCAAGCCCCAGCTCTTCTCTCTCTCTGA
CircID chr11:119047992|119048328
ORF Type ORF2
Protein Length 96
Nucleotide Length 288
Protein Sequence MAQLPQLSQLLLQHLMDVRLGRGVEGTTAEPGVSPMSFFMGSSPSSSLSLTLGEEGELPLHLPCPERPLTTVVAPTPSSSSQVDAALSFPEISSRC
Nucleotide Sequence TTGGCACAGCTTCCTCAGCTCAGCCAGCTTCTCCTTCAACATCTGATGGATGTGCGATTGGGCAGAGGGGTGGAAGGGACGACAGCAGAGCCTGGAGTCAGCCCCATGTCCTTCTTTATGGGCTCAAGCCCCAGCTCTTCTCTCTCTCTGACCCTGGGAGAGGAAGGAGAGCTCCCACTCCACCTGCCATGTCCTGAGAGGCCCCTCACCACTGTGGTGGCTCCAACACCCTCATCCTCCAGCCAGGTGGATGCGGCGCTGAGCTTCCCAGAGATCTCCTCACGCTGC
CircID chr11:119047992|119048328
ORF Type ORF3
Protein Length 68
Nucleotide Length 207
Protein Sequence MEDEGVGATTVVRGLSGHGRWSGSSPSSPRVREREELGLEPIKKDMGLTPGSAVVPSTPLPNRTSIRC
Nucleotide Sequence CTGGAGGATGAGGGTGTTGGAGCCACCACAGTGGTGAGGGGCCTCTCAGGACATGGCAGGTGGAGTGGGAGCTCTCCTTCCTCTCCCAGGGTCAGAGAGAGAGAAGAGCTGGGGCTTGAGCCCATAAAGAAGGACATGGGGCTGACTCCAGGCTCTGCTGTCGTCCCTTCCACCCCTCTGCCCAATCGCACATCCATCAGATGTTGA
CircID chr11:119047992|119048328
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MLKEKLAELRKLCQGLFFRVEERKKWPER
Nucleotide Sequence ATGTTGAAGGAGAAGCTGGCTGAGCTGAGGAAGCTGTGCCAAGGGCTGTTTTTTCGGGTAGAGGAGCGCAAGAAGTGGCCCGAACGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab