CircRNA Information

General Information
circRNA Basic Information
CircID chr11:119309728|119309850
Strand +
CircType exon
Host Gene ENSG00000076706.13;
Algorism CIRI2;
Sequence CATTCCCAGCTCCCTGCTCACTCTTCTCTCAGCCAAAGCCTCCAAAGGGACTAGAGAGAAGCCTCCTGCTCCCCTCGCCTGCACACCCCCTTTCAGAGGGCCACTGGGTTAGGACCTGAGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:119309728|119309850 hsa-miR-204-5p 0 0 1
chr11:119309728|119309850 hsa-miR-204-3p 0 0 1
chr11:119309728|119309850 hsa-miR-211-5p 0 0 1
chr11:119309728|119309850 hsa-miR-211-3p 0 0 1
chr11:119309728|119309850 hsa-miR-328-5p 0 0 1
chr11:119309728|119309850 hsa-miR-328-3p 0 0 1
chr11:119309728|119309850 hsa-miR-488-5p 0 0 1
chr11:119309728|119309850 hsa-miR-488-3p 0 0 1
chr11:119309728|119309850 hsa-miR-554 0 0 1
chr11:119309728|119309850 hsa-miR-647 0 0 1
chr11:119309728|119309850 hsa-miR-650 0 0 1
chr11:119309728|119309850 hsa-miR-920 0 1 1
chr11:119309728|119309850 hsa-miR-939-5p 0 0 1
chr11:119309728|119309850 hsa-miR-939-3p 0 0 1
chr11:119309728|119309850 hsa-miR-942-5p 0 0 1
chr11:119309728|119309850 hsa-miR-942-3p 0 0 1
chr11:119309728|119309850 hsa-miR-663b 1 0 1
chr11:119309728|119309850 hsa-miR-1291 0 0 1
chr11:119309728|119309850 hsa-miR-1251-5p 0 0 1
chr11:119309728|119309850 hsa-miR-1251-3p 0 0 1
chr11:119309728|119309850 hsa-miR-1253 0 1 1
chr11:119309728|119309850 hsa-miR-768-5p 0 0 1
chr11:119309728|119309850 hsa-miR-608 1 0 0
chr11:119309728|119309850 hsa-miR-623 1 0 0
chr11:119309728|119309850 hsa-miR-637 1 0 0
chr11:119309728|119309850 hsa-miR-648 1 0 0
chr11:119309728|119309850 hsa-miR-658 1 0 0
chr11:119309728|119309850 hsa-miR-762 1 0 0
chr11:119309728|119309850 hsa-miR-933 1 0 0
chr11:119309728|119309850 hsa-miR-3154 1 1 0
chr11:119309728|119309850 hsa-miR-3188 1 1 0
chr11:119309728|119309850 hsa-miR-4300 0 1 0
chr11:119309728|119309850 hsa-miR-4266 1 0 0
chr11:119309728|119309850 hsa-miR-4270 0 1 0
chr11:119309728|119309850 hsa-miR-4278 1 0 0
chr11:119309728|119309850 hsa-miR-3665 1 0 0
chr11:119309728|119309850 hsa-miR-3936 1 0 0
chr11:119309728|119309850 hsa-miR-1268b 1 0 0
chr11:119309728|119309850 hsa-miR-4443 0 1 0
chr11:119309728|119309850 hsa-miR-4466 1 0 0
chr11:119309728|119309850 hsa-miR-4478 1 0 0
chr11:119309728|119309850 hsa-miR-4481 1 0 0
chr11:119309728|119309850 hsa-miR-4505 1 0 0
chr11:119309728|119309850 hsa-miR-4516 1 0 0
chr11:119309728|119309850 hsa-miR-4525 1 0 0
chr11:119309728|119309850 hsa-miR-4533 1 0 0
chr11:119309728|119309850 hsa-miR-4651 1 0 0
chr11:119309728|119309850 hsa-miR-4656 1 0 0
chr11:119309728|119309850 hsa-miR-4669 1 0 0
chr11:119309728|119309850 hsa-miR-4689 1 0 0
chr11:119309728|119309850 hsa-miR-4706 1 0 0
chr11:119309728|119309850 hsa-miR-4710 1 0 0
chr11:119309728|119309850 hsa-miR-4734 1 0 0
chr11:119309728|119309850 hsa-miR-4767 1 0 0
chr11:119309728|119309850 hsa-miR-4784 1 0 0
chr11:119309728|119309850 hsa-miR-5192 1 0 0
chr11:119309728|119309850 hsa-miR-5693 0 1 0
chr11:119309728|119309850 hsa-miR-5698 1 0 0
chr11:119309728|119309850 hsa-miR-5739 1 0 0
chr11:119309728|119309850 hsa-miR-5787 1 0 0
chr11:119309728|119309850 hsa-miR-6085 1 0 0
chr11:119309728|119309850 hsa-miR-6090 1 0 0
chr11:119309728|119309850 hsa-miR-6127 1 0 0
chr11:119309728|119309850 hsa-miR-6165 0 1 0
chr11:119309728|119309850 hsa-miR-9900 0 1 0
chr11:119309728|119309850 hsa-miR-12115 1 0 0
chr11:119309728|119309850 hsa-miR-12119 1 0 0
chr11:119309728|119309850 hsa-miR-143-5p 1 0 0
chr11:119309728|119309850 hsa-miR-4433b-3p 1 0 0
chr11:119309728|119309850 hsa-miR-6734-5p 1 1 0
chr11:119309728|119309850 hsa-miR-504-3p 1 0 0
chr11:119309728|119309850 hsa-miR-6747-5p 1 1 0
chr11:119309728|119309850 hsa-miR-4433a-3p 1 0 0
chr11:119309728|119309850 hsa-miR-210-3p 1 0 0
chr11:119309728|119309850 hsa-miR-125a-3p 1 0 0
chr11:119309728|119309850 hsa-miR-6799-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6804-5p 1 0 0
chr11:119309728|119309850 hsa-miR-1236-5p 1 0 0
chr11:119309728|119309850 hsa-miR-3192-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6746-5p 1 0 0
chr11:119309728|119309850 hsa-miR-4722-5p 0 1 0
chr11:119309728|119309850 hsa-miR-6730-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6721-5p 0 1 0
chr11:119309728|119309850 hsa-miR-197-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6873-3p 0 1 0
chr11:119309728|119309850 hsa-miR-6772-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6732-5p 1 1 0
chr11:119309728|119309850 hsa-miR-6805-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6760-5p 1 0 0
chr11:119309728|119309850 hsa-miR-5008-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6815-3p 0 1 0
chr11:119309728|119309850 hsa-miR-1226-5p 1 0 0
chr11:119309728|119309850 hsa-miR-1229-5p 1 0 0
chr11:119309728|119309850 hsa-miR-4640-5p 1 0 0
chr11:119309728|119309850 hsa-miR-1228-5p 1 0 0
chr11:119309728|119309850 hsa-miR-4690-5p 1 0 0
chr11:119309728|119309850 hsa-miR-877-5p 1 0 0
chr11:119309728|119309850 hsa-miR-4787-5p 1 0 0
chr11:119309728|119309850 hsa-miR-5010-5p 1 0 0
chr11:119309728|119309850 hsa-miR-7152-3p 1 0 0
chr11:119309728|119309850 hsa-miR-2277-5p 1 0 0
chr11:119309728|119309850 hsa-miR-1207-5p 1 1 0
chr11:119309728|119309850 hsa-miR-4763-3p 1 0 0
chr11:119309728|119309850 hsa-miR-6769b-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6787-5p 1 1 0
chr11:119309728|119309850 hsa-miR-6812-5p 0 1 0
chr11:119309728|119309850 hsa-miR-1343-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6726-5p 0 1 0
chr11:119309728|119309850 hsa-miR-6752-5p 1 1 0
chr11:119309728|119309850 hsa-miR-6754-5p 0 1 0
chr11:119309728|119309850 hsa-miR-6803-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6842-5p 1 0 0
chr11:119309728|119309850 hsa-miR-7110-5p 1 1 0
chr11:119309728|119309850 hsa-miR-6751-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6788-5p 1 1 0
chr11:119309728|119309850 hsa-miR-6797-5p 1 0 0
chr11:119309728|119309850 hsa-miR-5196-5p 1 0 0
chr11:119309728|119309850 hsa-miR-10526-3p 1 1 0
chr11:119309728|119309850 hsa-miR-4649-5p 1 0 0
chr11:119309728|119309850 hsa-miR-4745-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6729-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6794-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6795-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6846-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6848-5p 1 0 0
chr11:119309728|119309850 hsa-miR-4758-5p 1 0 0
chr11:119309728|119309850 hsa-miR-5586-3p 0 1 0
chr11:119309728|119309850 hsa-miR-6511b-5p 1 1 0
chr11:119309728|119309850 hsa-miR-6731-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6856-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6891-5p 1 0 0
chr11:119309728|119309850 hsa-miR-4716-3p 1 0 0
chr11:119309728|119309850 hsa-miR-6750-5p 1 0 0
chr11:119309728|119309850 hsa-miR-6884-5p 1 0 0
chr11:119309728|119309850 hsa-miR-4768-5p 0 1 0
chr11:119309728|119309850 hsa-miR-6833-3p 0 1 0
chr11:119309728|119309850 hsa-miR-4482-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:119309728|119309850
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MLTLLSAKASKGTREKPPAPLACTPPFRGPLG
Nucleotide Sequence CTGCTCACTCTTCTCTCAGCCAAAGCCTCCAAAGGGACTAGAGAGAAGCCTCCTGCTCCCCTCGCCTGCACACCCCCTTTCAGAGGGCCACTGGGTTAG
CircID chr11:119309728|119309850
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MKGGVQARGAGGFSLVPLEALAERRVSRELGM
Nucleotide Sequence CTGAAAGGGGGTGTGCAGGCGAGGGGAGCAGGAGGCTTCTCTCTAGTCCCTTTGGAGGCTTTGGCTGAGAGAAGAGTGAGCAGGGAGCTGGGAATG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab