CircRNA Information

General Information
circRNA Basic Information
CircID chr11:119334928|119335137
Strand -
CircType exon
Host Gene ENSG00000173456.4;
Algorism CIRI2;
Sequence CTGGCCACCTTTCCCTCTACCAAGACTCCACTTCCGTCTTACCCACTTCTTCCTCAGATTCTTGGTACCCCCTGGGTTGGAGACTGCTCATTTTCCTTCCAAATTAATCCCAGACCCCCTAAAATATTGACAACCTTGACAACCCCCCAACCGAGGAGCCAGACTTTGTTTTGGACTAACTTCCATAGCCCTATCATGGAGGCAGTGTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:119334928|119335137 hsa-miR-208a-5p 0 0 1
chr11:119334928|119335137 hsa-miR-208a-3p 0 0 1
chr11:119334928|119335137 hsa-miR-149-5p 0 0 1
chr11:119334928|119335137 hsa-miR-149-3p 0 0 1
chr11:119334928|119335137 hsa-miR-379-5p 0 0 1
chr11:119334928|119335137 hsa-miR-379-3p 0 0 1
chr11:119334928|119335137 hsa-miR-555 0 0 1
chr11:119334928|119335137 hsa-miR-208b-5p 0 0 1
chr11:119334928|119335137 hsa-miR-208b-3p 0 0 1
chr11:119334928|119335137 hsa-miR-924 0 0 1
chr11:119334928|119335137 hsa-miR-1275 0 0 1
chr11:119334928|119335137 hsa-miR-1252-5p 0 0 1
chr11:119334928|119335137 hsa-miR-1252-3p 0 0 1
chr11:119334928|119335137 hsa-miR-1289 0 0 1
chr11:119334928|119335137 hsa-miR-515-5p 0 0 1
chr11:119334928|119335137 hsa-miR-453 0 0 1
chr11:119334928|119335137 hsa-miR-601 1 0 0
chr11:119334928|119335137 hsa-miR-892b 1 0 0
chr11:119334928|119335137 hsa-miR-760 1 0 0
chr11:119334928|119335137 hsa-miR-1182 1 0 0
chr11:119334928|119335137 hsa-miR-1293 1 0 0
chr11:119334928|119335137 hsa-miR-1268a 1 0 0
chr11:119334928|119335137 hsa-miR-2861 1 0 0
chr11:119334928|119335137 hsa-miR-3125 1 0 0
chr11:119334928|119335137 hsa-miR-3132 1 0 0
chr11:119334928|119335137 hsa-miR-3147 1 0 0
chr11:119334928|119335137 hsa-miR-3185 1 0 0
chr11:119334928|119335137 hsa-miR-4314 1 0 0
chr11:119334928|119335137 hsa-miR-4257 1 0 0
chr11:119334928|119335137 hsa-miR-4259 1 0 0
chr11:119334928|119335137 hsa-miR-4271 1 0 0
chr11:119334928|119335137 hsa-miR-4278 1 0 0
chr11:119334928|119335137 hsa-miR-3916 1 0 0
chr11:119334928|119335137 hsa-miR-1268b 1 0 0
chr11:119334928|119335137 hsa-miR-4425 1 0 0
chr11:119334928|119335137 hsa-miR-4448 1 0 0
chr11:119334928|119335137 hsa-miR-4450 1 0 0
chr11:119334928|119335137 hsa-miR-4458 1 0 0
chr11:119334928|119335137 hsa-miR-4476 1 0 0
chr11:119334928|119335137 hsa-miR-4507 1 0 0
chr11:119334928|119335137 hsa-miR-4510 1 0 0
chr11:119334928|119335137 hsa-miR-4516 1 0 0
chr11:119334928|119335137 hsa-miR-4533 1 0 0
chr11:119334928|119335137 hsa-miR-4657 1 0 0
chr11:119334928|119335137 hsa-miR-4689 1 0 0
chr11:119334928|119335137 hsa-miR-4739 1 0 0
chr11:119334928|119335137 hsa-miR-4741 1 0 0
chr11:119334928|119335137 hsa-miR-4748 1 0 0
chr11:119334928|119335137 hsa-miR-5572 1 0 0
chr11:119334928|119335137 hsa-miR-5703 1 0 0
chr11:119334928|119335137 hsa-miR-6081 1 0 0
chr11:119334928|119335137 hsa-miR-6124 1 0 0
chr11:119334928|119335137 hsa-miR-6127 1 0 0
chr11:119334928|119335137 hsa-miR-6129 1 0 0
chr11:119334928|119335137 hsa-miR-6133 1 0 0
chr11:119334928|119335137 hsa-miR-6134 1 0 0
chr11:119334928|119335137 hsa-miR-7150 1 0 0
chr11:119334928|119335137 hsa-miR-8088 1 0 0
chr11:119334928|119335137 hsa-miR-8089 1 0 0
chr11:119334928|119335137 hsa-miR-12114 1 0 0
chr11:119334928|119335137 hsa-miR-12115 1 0 0
chr11:119334928|119335137 hsa-miR-12118 1 0 0
chr11:119334928|119335137 hsa-miR-12119 1 0 0
chr11:119334928|119335137 hsa-miR-4433b-3p 1 0 0
chr11:119334928|119335137 hsa-miR-92a-1-5p 1 0 0
chr11:119334928|119335137 hsa-miR-7155-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6747-5p 1 0 0
chr11:119334928|119335137 hsa-miR-4433a-3p 1 0 0
chr11:119334928|119335137 hsa-miR-6765-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6857-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6728-5p 1 0 0
chr11:119334928|119335137 hsa-miR-766-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6833-5p 1 0 0
chr11:119334928|119335137 hsa-miR-3192-5p 1 0 0
chr11:119334928|119335137 hsa-miR-7847-3p 1 0 0
chr11:119334928|119335137 hsa-miR-4695-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6746-5p 1 0 0
chr11:119334928|119335137 hsa-miR-3928-3p 1 0 0
chr11:119334928|119335137 hsa-miR-197-5p 1 0 0
chr11:119334928|119335137 hsa-miR-433-3p 1 0 0
chr11:119334928|119335137 hsa-miR-6871-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6748-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6793-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6796-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6732-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6805-5p 1 0 0
chr11:119334928|119335137 hsa-miR-23a-5p 1 0 0
chr11:119334928|119335137 hsa-miR-1224-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6760-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6881-5p 1 0 0
chr11:119334928|119335137 hsa-miR-3156-5p 1 0 0
chr11:119334928|119335137 hsa-miR-615-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6835-5p 1 0 0
chr11:119334928|119335137 hsa-miR-7109-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6740-5p 1 0 0
chr11:119334928|119335137 hsa-miR-1229-5p 1 0 0
chr11:119334928|119335137 hsa-miR-193b-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6771-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6823-5p 1 0 0
chr11:119334928|119335137 hsa-miR-3202 1 0 0
chr11:119334928|119335137 hsa-miR-193a-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6824-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6789-5p 1 0 0
chr11:119334928|119335137 hsa-miR-3162-5p 1 0 0
chr11:119334928|119335137 hsa-miR-1225-5p 1 0 0
chr11:119334928|119335137 hsa-miR-1273h-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6769b-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6778-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6812-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6870-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6752-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6756-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6803-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6842-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6851-5p 1 0 0
chr11:119334928|119335137 hsa-miR-7110-5p 1 0 0
chr11:119334928|119335137 hsa-miR-10401-5p 1 0 0
chr11:119334928|119335137 hsa-miR-11181-3p 1 0 0
chr11:119334928|119335137 hsa-miR-1249-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6751-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6763-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6788-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6797-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6780b-5p 1 0 0
chr11:119334928|119335137 hsa-miR-328-5p 1 0 0
chr11:119334928|119335137 hsa-miR-4725-3p 1 0 0
chr11:119334928|119335137 hsa-miR-4745-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6794-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6795-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6846-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6848-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6858-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6887-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6831-5p 1 0 0
chr11:119334928|119335137 hsa-miR-4758-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6511a-5p 1 0 0
chr11:119334928|119335137 hsa-miR-3085-5p 1 0 0
chr11:119334928|119335137 hsa-miR-3198 1 0 0
chr11:119334928|119335137 hsa-miR-3940-5p 1 0 0
chr11:119334928|119335137 hsa-miR-1914-3p 1 0 0
chr11:119334928|119335137 hsa-miR-6855-5p 1 0 0
chr11:119334928|119335137 hsa-miR-4700-5p 1 0 0
chr11:119334928|119335137 hsa-miR-324-3p 1 0 0
chr11:119334928|119335137 hsa-miR-4646-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6876-5p 1 0 0
chr11:119334928|119335137 hsa-miR-4472 1 0 0
chr11:119334928|119335137 hsa-miR-4716-3p 1 0 0
chr11:119334928|119335137 hsa-miR-6849-5p 1 0 0
chr11:119334928|119335137 hsa-miR-6753-3p 1 0 0
chr11:119334928|119335137 hsa-miR-10400-3p 1 0 0
chr11:119334928|119335137 hsa-miR-619-5p 1 0 0
chr11:119334928|119335137 hsa-miR-494-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:119334928|119335137
ORF Type ORF1
Protein Length 70
Nucleotide Length 210
Protein Sequence LATFPSTKTPLPSYPLLPQILGTPWVGDCSFSFQINPRPPKILTTLTTPQPRSQTLFWTNFHSPIMEAVY
Nucleotide Sequence CTGGCCACCTTTCCCTCTACCAAGACTCCACTTCCGTCTTACCCACTTCTTCCTCAGATTCTTGGTACCCCCTGGGTTGGAGACTGCTCATTTTCCTTCCAAATTAATCCCAGACCCCCTAAAATATTGACAACCTTGACAACCCCCCAACCGAGGAGCCAGACTTTGTTTTGGACTAACTTCCATAGCCCTATCATGGAGGCAGTGTAC
CircID chr11:119334928|119335137
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MEVSPKQSLAPRLGGCQGCQYFRGSGINLEGK
Nucleotide Sequence ATGGAAGTTAGTCCAAAACAAAGTCTGGCTCCTCGGTTGGGGGGTTGTCAAGGTTGTCAATATTTTAGGGGGTCTGGGATTAATTTGGAAGGAAAATGA
CircID chr11:119334928|119335137
ORF Type ORF3
Protein Length 47
Nucleotide Length 144
Protein Sequence MIGLWKLVQNKVWLLGWGVVKVVNILGGLGLIWKENEQSPTQGVPRI
Nucleotide Sequence ATGATAGGGCTATGGAAGTTAGTCCAAAACAAAGTCTGGCTCCTCGGTTGGGGGGTTGTCAAGGTTGTCAATATTTTAGGGGGTCTGGGATTAATTTGGAAGGAAAATGAGCAGTCTCCAACCCAGGGGGTACCAAGAATCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab