CircRNA Information

General Information
circRNA Basic Information
CircID chr11:119420058|119420330
Strand +
CircType exon
Host Gene ENSG00000154096.12;
Algorism CIRI2;
Sequence CAGAGCCTTCGTCTGGACTGCCGCCATGAGAATACCAGCAGTTCACCCATCCAGTACGAGTTCAGCCTGACCCGTGAGACAAAGAAGCACGTGCTCTTTGGCACTGTGGGGGTGCCTGAGCACACATACCGCTCCCGAACCAACTTCACCAGCAAATACAACATGAAGGTCCTCTACTTATCCGCCTTCACTAGCAAGGACGAGGGCACCTACACGTGTGCACTCCACCACTCTGGCCATTCCCCACCCATCTCCTCCCAGAACGTCACAGTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:119420058|119420330 hsa-miR-198 0 0 1
chr11:119420058|119420330 hsa-miR-205-5p 0 0 1
chr11:119420058|119420330 hsa-miR-205-3p 0 0 1
chr11:119420058|119420330 hsa-miR-122-5p 0 0 1
chr11:119420058|119420330 hsa-miR-122-3p 0 0 1
chr11:119420058|119420330 hsa-miR-484 0 0 1
chr11:119420058|119420330 hsa-miR-562 0 0 1
chr11:119420058|119420330 hsa-miR-630 0 0 1
chr11:119420058|119420330 hsa-miR-659-5p 0 0 1
chr11:119420058|119420330 hsa-miR-659-3p 0 0 1
chr11:119420058|119420330 hsa-miR-765 1 1 1
chr11:119420058|119420330 hsa-miR-877-5p 0 0 1
chr11:119420058|119420330 hsa-miR-877-3p 0 0 1
chr11:119420058|119420330 hsa-miR-760 0 0 1
chr11:119420058|119420330 hsa-miR-1293 1 0 1
chr11:119420058|119420330 hsa-miR-1243 0 0 1
chr11:119420058|119420330 hsa-miR-1262 0 1 1
chr11:119420058|119420330 hsa-miR-1276 0 0 1
chr11:119420058|119420330 hsa-miR-491-5p 1 0 1
chr11:119420058|119420330 hsa-miR-502-5p 1 1 1
chr11:119420058|119420330 hsa-miR-455-3p 0 0 1
chr11:119420058|119420330 hsa-miR-128 0 0 1
chr11:119420058|119420330 hsa-miR-138 0 0 1
chr11:119420058|119420330 hsa-miR-638 1 0 0
chr11:119420058|119420330 hsa-miR-762 1 0 0
chr11:119420058|119420330 hsa-miR-297 0 1 0
chr11:119420058|119420330 hsa-miR-1183 1 0 0
chr11:119420058|119420330 hsa-miR-1268a 1 0 0
chr11:119420058|119420330 hsa-miR-2110 1 1 0
chr11:119420058|119420330 hsa-miR-3141 1 0 0
chr11:119420058|119420330 hsa-miR-3154 1 0 0
chr11:119420058|119420330 hsa-miR-3165 1 0 0
chr11:119420058|119420330 hsa-miR-3196 1 0 0
chr11:119420058|119420330 hsa-miR-4314 1 0 0
chr11:119420058|119420330 hsa-miR-4271 1 0 0
chr11:119420058|119420330 hsa-miR-3621 1 0 0
chr11:119420058|119420330 hsa-miR-1268b 1 0 0
chr11:119420058|119420330 hsa-miR-4441 1 0 0
chr11:119420058|119420330 hsa-miR-4466 1 0 0
chr11:119420058|119420330 hsa-miR-4467 1 0 0
chr11:119420058|119420330 hsa-miR-3689c 1 0 0
chr11:119420058|119420330 hsa-miR-4488 1 0 0
chr11:119420058|119420330 hsa-miR-4507 1 0 0
chr11:119420058|119420330 hsa-miR-4516 1 0 0
chr11:119420058|119420330 hsa-miR-4525 1 0 0
chr11:119420058|119420330 hsa-miR-4539 0 1 0
chr11:119420058|119420330 hsa-miR-3960 1 0 0
chr11:119420058|119420330 hsa-miR-4651 1 0 0
chr11:119420058|119420330 hsa-miR-4663 1 0 0
chr11:119420058|119420330 hsa-miR-4686 1 0 0
chr11:119420058|119420330 hsa-miR-4689 1 0 0
chr11:119420058|119420330 hsa-miR-4706 1 0 0
chr11:119420058|119420330 hsa-miR-4739 1 1 0
chr11:119420058|119420330 hsa-miR-4751 1 0 0
chr11:119420058|119420330 hsa-miR-4784 1 1 0
chr11:119420058|119420330 hsa-miR-5192 1 0 0
chr11:119420058|119420330 hsa-miR-5698 1 0 0
chr11:119420058|119420330 hsa-miR-5705 1 0 0
chr11:119420058|119420330 hsa-miR-5787 1 0 0
chr11:119420058|119420330 hsa-miR-6081 1 0 0
chr11:119420058|119420330 hsa-miR-6088 1 0 0
chr11:119420058|119420330 hsa-miR-6745 1 0 0
chr11:119420058|119420330 hsa-miR-8075 1 0 0
chr11:119420058|119420330 hsa-miR-12113 0 1 0
chr11:119420058|119420330 hsa-miR-12115 1 0 0
chr11:119420058|119420330 hsa-miR-12119 1 0 0
chr11:119420058|119420330 hsa-miR-138-5p 1 1 0
chr11:119420058|119420330 hsa-miR-370-3p 1 0 0
chr11:119420058|119420330 hsa-miR-4435 0 1 0
chr11:119420058|119420330 hsa-miR-4433b-3p 1 0 0
chr11:119420058|119420330 hsa-miR-92a-2-5p 0 1 0
chr11:119420058|119420330 hsa-miR-6734-5p 1 0 0
chr11:119420058|119420330 hsa-miR-4731-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6747-5p 1 0 0
chr11:119420058|119420330 hsa-miR-125b-1-3p 1 0 0
chr11:119420058|119420330 hsa-miR-7106-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6894-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6857-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6799-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6728-5p 1 0 0
chr11:119420058|119420330 hsa-miR-3692-5p 1 0 0
chr11:119420058|119420330 hsa-miR-8071 1 0 0
chr11:119420058|119420330 hsa-miR-766-5p 1 0 0
chr11:119420058|119420330 hsa-miR-3192-5p 1 1 0
chr11:119420058|119420330 hsa-miR-6757-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6880-5p 1 0 0
chr11:119420058|119420330 hsa-miR-3677-5p 0 1 0
chr11:119420058|119420330 hsa-miR-7154-3p 1 0 0
chr11:119420058|119420330 hsa-miR-6741-5p 1 0 0
chr11:119420058|119420330 hsa-miR-3187-3p 1 0 0
chr11:119420058|119420330 hsa-miR-1178-5p 1 0 0
chr11:119420058|119420330 hsa-miR-8069 1 0 0
chr11:119420058|119420330 hsa-miR-6716-5p 1 0 0
chr11:119420058|119420330 hsa-miR-1292-5p 1 0 0
chr11:119420058|119420330 hsa-miR-3180-3p 1 0 0
chr11:119420058|119420330 hsa-miR-6748-5p 1 1 0
chr11:119420058|119420330 hsa-miR-6805-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6782-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6810-5p 1 0 0
chr11:119420058|119420330 hsa-miR-30b-3p 1 1 0
chr11:119420058|119420330 hsa-miR-6786-5p 1 0 0
chr11:119420058|119420330 hsa-miR-7109-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6740-5p 1 0 0
chr11:119420058|119420330 hsa-miR-3944-3p 1 0 0
chr11:119420058|119420330 hsa-miR-1229-5p 1 0 0
chr11:119420058|119420330 hsa-miR-4640-5p 1 0 0
chr11:119420058|119420330 hsa-miR-1908-5p 1 0 0
chr11:119420058|119420330 hsa-miR-1228-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6771-5p 1 1 0
chr11:119420058|119420330 hsa-miR-4743-5p 1 0 0
chr11:119420058|119420330 hsa-miR-149-3p 1 0 0
chr11:119420058|119420330 hsa-miR-6824-5p 1 0 0
chr11:119420058|119420330 hsa-miR-3162-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6802-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6877-5p 1 0 0
chr11:119420058|119420330 hsa-miR-4740-5p 1 0 0
chr11:119420058|119420330 hsa-miR-5010-5p 1 1 0
chr11:119420058|119420330 hsa-miR-2355-3p 1 1 0
chr11:119420058|119420330 hsa-miR-4529-3p 1 0 0
chr11:119420058|119420330 hsa-miR-6767-3p 0 1 0
chr11:119420058|119420330 hsa-miR-10400-5p 1 0 0
chr11:119420058|119420330 hsa-miR-1233-5p 1 0 0
chr11:119420058|119420330 hsa-miR-1273h-5p 0 1 0
chr11:119420058|119420330 hsa-miR-3689b-3p 1 0 0
chr11:119420058|119420330 hsa-miR-4763-3p 1 0 0
chr11:119420058|119420330 hsa-miR-6769b-5p 1 1 0
chr11:119420058|119420330 hsa-miR-6778-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6812-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6816-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6870-5p 1 1 0
chr11:119420058|119420330 hsa-miR-1343-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6754-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6756-5p 1 1 0
chr11:119420058|119420330 hsa-miR-6769a-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6851-5p 1 0 0
chr11:119420058|119420330 hsa-miR-10401-5p 1 0 0
chr11:119420058|119420330 hsa-miR-11181-3p 1 0 0
chr11:119420058|119420330 hsa-miR-6763-5p 1 1 0
chr11:119420058|119420330 hsa-miR-6779-5p 1 1 0
chr11:119420058|119420330 hsa-miR-6780a-5p 1 1 0
chr11:119420058|119420330 hsa-miR-6788-5p 1 0 0
chr11:119420058|119420330 hsa-miR-7111-5p 1 0 0
chr11:119420058|119420330 hsa-miR-4728-5p 1 0 0
chr11:119420058|119420330 hsa-miR-5196-5p 1 0 0
chr11:119420058|119420330 hsa-miR-1237-5p 1 0 0
chr11:119420058|119420330 hsa-miR-3689a-3p 1 0 0
chr11:119420058|119420330 hsa-miR-4701-3p 1 0 0
chr11:119420058|119420330 hsa-miR-4725-3p 1 0 0
chr11:119420058|119420330 hsa-miR-4726-5p 1 0 0
chr11:119420058|119420330 hsa-miR-675-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6777-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6795-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6846-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6883-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6887-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6889-5p 1 0 0
chr11:119420058|119420330 hsa-miR-939-5p 1 0 0
chr11:119420058|119420330 hsa-miR-4758-5p 1 0 0
chr11:119420058|119420330 hsa-miR-3940-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6736-5p 1 0 0
chr11:119420058|119420330 hsa-miR-3679-5p 1 0 0
chr11:119420058|119420330 hsa-miR-4646-5p 1 0 0
chr11:119420058|119420330 hsa-miR-6785-5p 1 0 0
chr11:119420058|119420330 hsa-miR-3606-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:119420058|119420330
ORF Type ORF1
Protein Length 87
Nucleotide Length 261
Protein Sequence MDCRHENTSSSPIQYEFSLTRETKKHVLFGTVGVPEHTYRSRTNFTSKYNMKVLYLSAFTSKDEGTYTCALHHSGHSPPISSQNVTV
Nucleotide Sequence CTGGACTGCCGCCATGAGAATACCAGCAGTTCACCCATCCAGTACGAGTTCAGCCTGACCCGTGAGACAAAGAAGCACGTGCTCTTTGGCACTGTGGGGGTGCCTGAGCACACATACCGCTCCCGAACCAACTTCACCAGCAAATACAACATGAAGGTCCTCTACTTATCCGCCTTCACTAGCAAGGACGAGGGCACCTACACGTGTGCACTCCACCACTCTGGCCATTCCCCACCCATCTCCTCCCAGAACGTCACAGTG
CircID chr11:119420058|119420330
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MGGDGWGMARVVECTRVGALVLASEGG
Nucleotide Sequence CTGGGAGGAGATGGGTGGGGAATGGCCAGAGTGGTGGAGTGCACACGTGTAGGTGCCCTCGTCCTTGCTAGTGAAGGCGGATAA
CircID chr11:119420058|119420330
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MLYLLVKLVRERYVCSGTPTVPKSTCFFVSRVRLNSYWMGELLVFSWRQSRRRL
Nucleotide Sequence ATGTTGTATTTGCTGGTGAAGTTGGTTCGGGAGCGGTATGTGTGCTCAGGCACCCCCACAGTGCCAAAGAGCACGTGCTTCTTTGTCTCACGGGTCAGGCTGAACTCGTACTGGATGGGTGAACTGCTGGTATTCTCATGGCGGCAGTCCAGACGAAGGCTC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab