CircRNA Information

General Information
circRNA Basic Information
CircID chr11:11942963|11943091
Strand +
CircType exon
Host Gene ENSG00000170242.16;
Algorism CIRI2;
Sequence CTTCATCTGCAGCATAAGGTTCAGCTTTGAAATACATGTACTGCATTTCTCCCCTACTCTTGCCACTCTCATCATATTCACTATCAGTTCCAGAGTCTTCTTCTGCTGTATCCCATGTTTCTTTTTTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:11942963|11943091 hsa-miR-31-5p 0 0 1
chr11:11942963|11943091 hsa-miR-31-3p 0 0 1
chr11:11942963|11943091 hsa-miR-320a-5p 0 0 1
chr11:11942963|11943091 hsa-miR-320a-3p 0 0 1
chr11:11942963|11943091 hsa-miR-494-5p 0 0 1
chr11:11942963|11943091 hsa-miR-494-3p 0 0 1
chr11:11942963|11943091 hsa-miR-539-5p 0 0 1
chr11:11942963|11943091 hsa-miR-539-3p 0 0 1
chr11:11942963|11943091 hsa-miR-607 0 0 1
chr11:11942963|11943091 hsa-miR-298 0 0 1
chr11:11942963|11943091 hsa-miR-922 0 1 1
chr11:11942963|11943091 hsa-miR-1299 0 1 1
chr11:11942963|11943091 hsa-miR-1272 0 0 1
chr11:11942963|11943091 hsa-miR-1322 0 0 1
chr11:11942963|11943091 hsa-miR-330-3p 0 0 1
chr11:11942963|11943091 hsa-miR-875-3p 0 0 1
chr11:11942963|11943091 hsa-miR-320b 0 0 1
chr11:11942963|11943091 hsa-miR-320c 0 0 1
chr11:11942963|11943091 hsa-miR-320d 0 0 1
chr11:11942963|11943091 hsa-miR-760 1 0 0
chr11:11942963|11943091 hsa-miR-1183 0 1 0
chr11:11942963|11943091 hsa-miR-1268a 1 0 0
chr11:11942963|11943091 hsa-miR-1275 1 0 0
chr11:11942963|11943091 hsa-miR-3154 1 0 0
chr11:11942963|11943091 hsa-miR-3174 1 0 0
chr11:11942963|11943091 hsa-miR-3175 1 1 0
chr11:11942963|11943091 hsa-miR-3185 0 1 0
chr11:11942963|11943091 hsa-miR-4306 1 0 0
chr11:11942963|11943091 hsa-miR-1268b 1 0 0
chr11:11942963|11943091 hsa-miR-4430 1 0 0
chr11:11942963|11943091 hsa-miR-3135b 1 0 0
chr11:11942963|11943091 hsa-miR-2392 1 0 0
chr11:11942963|11943091 hsa-miR-4658 1 0 0
chr11:11942963|11943091 hsa-miR-4689 1 0 0
chr11:11942963|11943091 hsa-miR-4739 1 0 0
chr11:11942963|11943091 hsa-miR-5186 1 0 0
chr11:11942963|11943091 hsa-miR-5192 1 0 0
chr11:11942963|11943091 hsa-miR-5698 1 0 0
chr11:11942963|11943091 hsa-miR-6086 1 0 0
chr11:11942963|11943091 hsa-miR-6165 1 0 0
chr11:11942963|11943091 hsa-miR-7150 1 0 0
chr11:11942963|11943091 hsa-miR-8052 1 1 0
chr11:11942963|11943091 hsa-miR-8074 1 0 0
chr11:11942963|11943091 hsa-miR-4433b-3p 1 0 0
chr11:11942963|11943091 hsa-miR-6734-5p 1 0 0
chr11:11942963|11943091 hsa-miR-4433a-3p 1 1 0
chr11:11942963|11943091 hsa-miR-3150a-3p 1 0 0
chr11:11942963|11943091 hsa-miR-6825-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6510-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6804-5p 1 0 0
chr11:11942963|11943091 hsa-miR-1236-5p 1 0 0
chr11:11942963|11943091 hsa-miR-4722-5p 1 0 0
chr11:11942963|11943091 hsa-miR-3677-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6890-5p 1 1 0
chr11:11942963|11943091 hsa-miR-6721-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6716-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6871-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6748-5p 1 0 0
chr11:11942963|11943091 hsa-miR-1224-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6760-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6881-5p 1 0 0
chr11:11942963|11943091 hsa-miR-223-5p 0 1 0
chr11:11942963|11943091 hsa-miR-185-5p 1 0 0
chr11:11942963|11943091 hsa-miR-4693-3p 1 1 0
chr11:11942963|11943091 hsa-miR-1229-5p 1 0 0
chr11:11942963|11943091 hsa-miR-4713-3p 1 0 0
chr11:11942963|11943091 hsa-miR-6824-5p 1 0 0
chr11:11942963|11943091 hsa-miR-3162-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6878-5p 1 0 0
chr11:11942963|11943091 hsa-miR-423-5p 1 0 0
chr11:11942963|11943091 hsa-miR-4796-3p 1 0 0
chr11:11942963|11943091 hsa-miR-514a-5p 0 1 0
chr11:11942963|11943091 hsa-miR-6778-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6865-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6870-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6803-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6751-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6779-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6788-5p 1 0 0
chr11:11942963|11943091 hsa-miR-7111-5p 1 0 0
chr11:11942963|11943091 hsa-miR-4728-5p 1 0 0
chr11:11942963|11943091 hsa-miR-5196-5p 1 0 0
chr11:11942963|11943091 hsa-miR-328-5p 1 0 0
chr11:11942963|11943091 hsa-miR-4745-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6738-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6795-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6887-5p 1 0 0
chr11:11942963|11943091 hsa-miR-4723-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6885-5p 1 0 0
chr11:11942963|11943091 hsa-miR-939-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6511a-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6731-5p 1 0 0
chr11:11942963|11943091 hsa-miR-3679-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6790-5p 1 0 0
chr11:11942963|11943091 hsa-miR-6849-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:11942963|11943091
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MHFSPTLATLIIFTISSRVFFCCIPCFFF
Nucleotide Sequence CTGCATTTCTCCCCTACTCTTGCCACTCTCATCATATTCACTATCAGTTCCAGAGTCTTCTTCTGCTGTATCCCATGTTTCTTTTTT
CircID chr11:11942963|11943091
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MKYMYCISPLLLPLSSYSLSVPESSSAVSHVSFF
Nucleotide Sequence TTGAAATACATGTACTGCATTTCTCCCCTACTCTTGCCACTCTCATCATATTCACTATCAGTTCCAGAGTCTTCTTCTGCTGTATCCCATGTTTCTTTTTTC
CircID chr11:11942963|11943091
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MELIVNMMRVARVGEKCSTCISKLNLMLQMK
Nucleotide Sequence CTGGAACTGATAGTGAATATGATGAGAGTGGCAAGAGTAGGGGAGAAATGCAGTACATGTATTTCAAAGCTGAACCTTATGCTGCAGATGAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab