CircRNA Information

General Information
circRNA Basic Information
CircID chr11:1200738|1201052
Strand -
CircType exon
Host Gene ENSG00000215182.8;
Algorism CIRI2;
Sequence CTCCCATATGTCCTCTGAGCTCGGCTTCCAAGGCCAGTGGAACTTGTGCCCCTGTCCAGGCGGCTGCAGCTTTGAACACACTGTCCACGCCCGCTTTCTTGTGGAGGGTGTGGGCTATGGGTCACCTGCTGCCTGGAGGAGGGGCCCTTACCCACCCCGCCTGCAGCCACCTCTCAGGACCAGCCCCGGGGCTGGCCGAGCTCCTCTGGCCATGCATCCAGCCTGCTGTTCTGGGGACGTGAGCATCACCTGAGGGTCTCAGGAATGACGCTTGGACATGGTGATCAGCTGCCTGGTGGCTGCAGGAGGAAGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:1200738|1201052 hsa-miR-214-5p 0 0 1
chr11:1200738|1201052 hsa-miR-214-3p 0 0 1
chr11:1200738|1201052 hsa-miR-320a-5p 0 0 1
chr11:1200738|1201052 hsa-miR-320a-3p 0 0 1
chr11:1200738|1201052 hsa-miR-193b-5p 0 0 1
chr11:1200738|1201052 hsa-miR-193b-3p 0 0 1
chr11:1200738|1201052 hsa-miR-555 0 0 1
chr11:1200738|1201052 hsa-miR-604 0 0 1
chr11:1200738|1201052 hsa-miR-608 1 1 1
chr11:1200738|1201052 hsa-miR-647 0 0 1
chr11:1200738|1201052 hsa-miR-708-5p 0 0 1
chr11:1200738|1201052 hsa-miR-708-3p 0 0 1
chr11:1200738|1201052 hsa-miR-1178-5p 0 0 1
chr11:1200738|1201052 hsa-miR-1178-3p 0 0 1
chr11:1200738|1201052 hsa-miR-1200 0 1 1
chr11:1200738|1201052 hsa-miR-1205 0 0 1
chr11:1200738|1201052 hsa-miR-1287-5p 0 0 1
chr11:1200738|1201052 hsa-miR-1287-3p 0 0 1
chr11:1200738|1201052 hsa-miR-671-5p 1 0 1
chr11:1200738|1201052 hsa-miR-125a-3p 0 1 1
chr11:1200738|1201052 hsa-miR-769-5p 0 0 1
chr11:1200738|1201052 hsa-miR-296-5p 0 1 1
chr11:1200738|1201052 hsa-miR-1184 0 1 1
chr11:1200738|1201052 hsa-miR-330-3p 0 0 1
chr11:1200738|1201052 hsa-miR-28-5p 0 1 1
chr11:1200738|1201052 hsa-miR-320b 0 1 1
chr11:1200738|1201052 hsa-miR-320c 0 0 1
chr11:1200738|1201052 hsa-miR-320d 0 0 1
chr11:1200738|1201052 hsa-miR-193a-3p 0 1 1
chr11:1200738|1201052 hsa-miR-1268 0 0 1
chr11:1200738|1201052 hsa-miR-1254 0 0 1
chr11:1200738|1201052 hsa-miR-663 0 0 1
chr11:1200738|1201052 hsa-miR-449a 0 1 0
chr11:1200738|1201052 hsa-miR-612 1 1 0
chr11:1200738|1201052 hsa-miR-650 1 0 0
chr11:1200738|1201052 hsa-miR-762 1 1 0
chr11:1200738|1201052 hsa-miR-1183 1 0 0
chr11:1200738|1201052 hsa-miR-1268a 0 1 0
chr11:1200738|1201052 hsa-miR-3138 0 1 0
chr11:1200738|1201052 hsa-miR-3176 0 1 0
chr11:1200738|1201052 hsa-miR-4303 1 0 0
chr11:1200738|1201052 hsa-miR-4324 0 1 0
chr11:1200738|1201052 hsa-miR-4268 0 1 0
chr11:1200738|1201052 hsa-miR-4329 0 1 0
chr11:1200738|1201052 hsa-miR-3651 0 1 0
chr11:1200738|1201052 hsa-miR-3652 1 0 0
chr11:1200738|1201052 hsa-miR-3937 0 1 0
chr11:1200738|1201052 hsa-miR-1268b 1 1 0
chr11:1200738|1201052 hsa-miR-4429 0 1 0
chr11:1200738|1201052 hsa-miR-4437 1 1 0
chr11:1200738|1201052 hsa-miR-4449 1 1 0
chr11:1200738|1201052 hsa-miR-4466 1 0 0
chr11:1200738|1201052 hsa-miR-4498 0 1 0
chr11:1200738|1201052 hsa-miR-4508 0 1 0
chr11:1200738|1201052 hsa-miR-4651 1 1 0
chr11:1200738|1201052 hsa-miR-4663 1 1 0
chr11:1200738|1201052 hsa-miR-4673 0 1 0
chr11:1200738|1201052 hsa-miR-4688 1 0 0
chr11:1200738|1201052 hsa-miR-4692 0 1 0
chr11:1200738|1201052 hsa-miR-4734 1 0 0
chr11:1200738|1201052 hsa-miR-4741 1 0 0
chr11:1200738|1201052 hsa-miR-4767 1 0 0
chr11:1200738|1201052 hsa-miR-5787 1 0 0
chr11:1200738|1201052 hsa-miR-6131 0 1 0
chr11:1200738|1201052 hsa-miR-8073 1 0 0
chr11:1200738|1201052 hsa-miR-12115 1 0 0
chr11:1200738|1201052 hsa-miR-125b-2-3p 0 1 0
chr11:1200738|1201052 hsa-miR-4435 0 1 0
chr11:1200738|1201052 hsa-miR-4687-3p 1 0 0
chr11:1200738|1201052 hsa-miR-6089 1 0 0
chr11:1200738|1201052 hsa-miR-3192-5p 1 1 0
chr11:1200738|1201052 hsa-miR-1301-3p 0 1 0
chr11:1200738|1201052 hsa-miR-6875-3p 0 1 0
chr11:1200738|1201052 hsa-miR-6741-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6762-3p 1 0 0
chr11:1200738|1201052 hsa-miR-6727-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6842-3p 1 0 0
chr11:1200738|1201052 hsa-miR-6721-5p 1 0 0
chr11:1200738|1201052 hsa-miR-8069 1 0 0
chr11:1200738|1201052 hsa-miR-3180-3p 1 0 0
chr11:1200738|1201052 hsa-miR-6772-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6827-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6798-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6782-5p 1 0 0
chr11:1200738|1201052 hsa-miR-3194-5p 0 1 0
chr11:1200738|1201052 hsa-miR-6821-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6786-5p 1 0 0
chr11:1200738|1201052 hsa-miR-5088-5p 1 0 0
chr11:1200738|1201052 hsa-miR-3944-3p 1 0 0
chr11:1200738|1201052 hsa-miR-4786-3p 1 0 0
chr11:1200738|1201052 hsa-miR-6784-5p 0 1 0
chr11:1200738|1201052 hsa-miR-6757-3p 0 1 0
chr11:1200738|1201052 hsa-miR-885-3p 1 0 0
chr11:1200738|1201052 hsa-miR-1228-5p 1 0 0
chr11:1200738|1201052 hsa-miR-4690-5p 1 1 0
chr11:1200738|1201052 hsa-miR-6847-5p 0 1 0
chr11:1200738|1201052 hsa-miR-4667-3p 0 1 0
chr11:1200738|1201052 hsa-miR-6830-5p 0 1 0
chr11:1200738|1201052 hsa-miR-6789-5p 1 0 0
chr11:1200738|1201052 hsa-miR-7156-3p 0 1 0
chr11:1200738|1201052 hsa-miR-4715-5p 1 0 0
chr11:1200738|1201052 hsa-miR-7160-3p 0 1 0
chr11:1200738|1201052 hsa-miR-7152-3p 0 1 0
chr11:1200738|1201052 hsa-miR-1911-3p 0 1 0
chr11:1200738|1201052 hsa-miR-4750-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6513-3p 1 0 0
chr11:1200738|1201052 hsa-miR-2355-5p 0 1 0
chr11:1200738|1201052 hsa-miR-4749-3p 1 1 0
chr11:1200738|1201052 hsa-miR-10400-5p 1 0 0
chr11:1200738|1201052 hsa-miR-1273h-5p 1 0 0
chr11:1200738|1201052 hsa-miR-4763-3p 1 0 0
chr11:1200738|1201052 hsa-miR-6769b-5p 0 1 0
chr11:1200738|1201052 hsa-miR-6816-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6865-5p 0 1 0
chr11:1200738|1201052 hsa-miR-6775-5p 1 0 0
chr11:1200738|1201052 hsa-miR-1343-5p 1 0 0
chr11:1200738|1201052 hsa-miR-5001-5p 1 1 0
chr11:1200738|1201052 hsa-miR-6743-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6752-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6756-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6769a-5p 0 1 0
chr11:1200738|1201052 hsa-miR-6815-5p 0 1 0
chr11:1200738|1201052 hsa-miR-6819-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6851-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6722-3p 1 0 0
chr11:1200738|1201052 hsa-miR-3127-3p 1 1 0
chr11:1200738|1201052 hsa-miR-10396a-5p 1 0 0
chr11:1200738|1201052 hsa-miR-1909-3p 1 0 0
chr11:1200738|1201052 hsa-miR-328-5p 1 0 0
chr11:1200738|1201052 hsa-miR-4726-5p 0 1 0
chr11:1200738|1201052 hsa-miR-6729-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6738-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6846-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6848-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6885-5p 1 0 0
chr11:1200738|1201052 hsa-miR-939-5p 1 1 0
chr11:1200738|1201052 hsa-miR-6511b-5p 0 1 0
chr11:1200738|1201052 hsa-miR-10396a-3p 0 1 0
chr11:1200738|1201052 hsa-miR-10396b-3p 0 1 0
chr11:1200738|1201052 hsa-miR-6736-5p 0 1 0
chr11:1200738|1201052 hsa-miR-4646-5p 1 0 0
chr11:1200738|1201052 hsa-miR-6791-5p 1 1 0
chr11:1200738|1201052 hsa-miR-6792-3p 0 1 0
chr11:1200738|1201052 hsa-miR-6823-3p 1 0 0
chr11:1200738|1201052 hsa-miR-3085-3p 1 0 0
chr11:1200738|1201052 hsa-miR-10394-5p 0 1 0
chr11:1200738|1201052 hsa-miR-4691-5p 0 1 0
chr11:1200738|1201052 hsa-miR-449b-5p 0 1 0
chr11:1200738|1201052 hsa-miR-3619-5p 1 1 0
chr11:1200738|1201052 hsa-miR-3922-3p 0 1 0
chr11:1200738|1201052 hsa-miR-519a-2-5p 0 1 0
chr11:1200738|1201052 hsa-miR-520b-5p 0 1 0
chr11:1200738|1201052 hsa-miR-125b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:1200738|1201052
ORF Type ORF1
Protein Length 61
Nucleotide Length 183
Protein Sequence MEEGPLPTPPAATSQDQPRGWPSSSGHASSLLFWGREHHLRVSGMTLGHGDQLPGGCRRKN
Nucleotide Sequence CTGGAGGAGGGGCCCTTACCCACCCCGCCTGCAGCCACCTCTCAGGACCAGCCCCGGGGCTGGCCGAGCTCCTCTGGCCATGCATCCAGCCTGCTGTTCTGGGGACGTGAGCATCACCTGAGGGTCTCAGGAATGACGCTTGGACATGGTGATCAGCTGCCTGGTGGCTGCAGGAGGAAGAAC

CircID chr11:1200738|1201052
ORF Type ORF2
Protein Length 81
Nucleotide Length 246
Protein Sequence MSSELGFQGQWNLCPCPGGCSFEHTVHARFLVEGVGYGSPAAWRRGPYPPRLQPPLRTSPGAGRAPLAMHPACCSGDVSIT
Nucleotide Sequence ATGTCCTCTGAGCTCGGCTTCCAAGGCCAGTGGAACTTGTGCCCCTGTCCAGGCGGCTGCAGCTTTGAACACACTGTCCACGCCCGCTTTCTTGTGGAGGGTGTGGGCTATGGGTCACCTGCTGCCTGGAGGAGGGGCCCTTACCCACCCCGCCTGCAGCCACCTCTCAGGACCAGCCCCGGGGCTGGCCGAGCTCCTCTGGCCATGCATCCAGCCTGCTGTTCTGGGGACGTGAGCATCACCTGA

CircID chr11:1200738|1201052
ORF Type ORF3
Protein Length 75
Nucleotide Length 228
Protein Sequence MSSASKASGTCAPVQAAAALNTLSTPAFLWRVWAMGHLLPGGGALTHPACSHLSGPAPGLAELLWPCIQPAVLGT
Nucleotide Sequence CTGAGCTCGGCTTCCAAGGCCAGTGGAACTTGTGCCCCTGTCCAGGCGGCTGCAGCTTTGAACACACTGTCCACGCCCGCTTTCTTGTGGAGGGTGTGGGCTATGGGTCACCTGCTGCCTGGAGGAGGGGCCCTTACCCACCCCGCCTGCAGCCACCTCTCAGGACCAGCCCCGGGGCTGGCCGAGCTCCTCTGGCCATGCATCCAGCCTGCTGTTCTGGGGACGTGA

CircID chr11:1200738|1201052
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MLTSPEQQAGCMARGARPAPGLVLRGGCRRGG
Nucleotide Sequence ATGCTCACGTCCCCAGAACAGCAGGCTGGATGCATGGCCAGAGGAGCTCGGCCAGCCCCGGGGCTGGTCCTGAGAGGTGGCTGCAGGCGGGGTGGGTAA

CircID chr11:1200738|1201052
ORF Type ORF5
Protein Length 46
Nucleotide Length 141
Protein Sequence MRPSGDAHVPRTAGWMHGQRSSASPGAGPERWLQAGWVRAPPPGSR
Nucleotide Sequence CTGAGACCCTCAGGTGATGCTCACGTCCCCAGAACAGCAGGCTGGATGCATGGCCAGAGGAGCTCGGCCAGCCCCGGGGCTGGTCCTGAGAGGTGGCTGCAGGCGGGGTGGGTAAGGGCCCCTCCTCCAGGCAGCAGGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites