CircRNA Information

General Information
circRNA Basic Information
CircID chr11:123059669|123059917
Strand +
CircType exon
Host Gene ENSG00000109971.12;
Algorism CIRI2;
Sequence ACCCACTTGGGTGGAGAAGATTTTGACAACCGAATGGTCAACCATTTTATTGCTGAGTTTAAGCGCAAGCATAAGAAGGACATCAGTGAGAACAAGAGAGCTGTAAGACGCCTCCGTACTGCTTGTGAACGTGCTAAGCGTACCCTCTCTTCCAGCACCCAGGCCAGTATTGAGATCGATTCTCTCTATGAAGGAATCGACTTCTATACCTCCATTACCCGTGCCCGATTTGAAGAACTGAATGCTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:123059669|123059917 hsa-miR-205-5p 0 0 1
chr11:123059669|123059917 hsa-miR-205-3p 0 0 1
chr11:123059669|123059917 hsa-miR-200b-5p 0 0 1
chr11:123059669|123059917 hsa-miR-200b-3p 0 0 1
chr11:123059669|123059917 hsa-miR-200c-5p 0 0 1
chr11:123059669|123059917 hsa-miR-200c-3p 0 0 1
chr11:123059669|123059917 hsa-miR-429 0 0 1
chr11:123059669|123059917 hsa-miR-376b-5p 0 0 1
chr11:123059669|123059917 hsa-miR-376b-3p 0 0 1
chr11:123059669|123059917 hsa-miR-202-5p 0 0 1
chr11:123059669|123059917 hsa-miR-202-3p 0 0 1
chr11:123059669|123059917 hsa-miR-193b-5p 0 0 1
chr11:123059669|123059917 hsa-miR-193b-3p 0 0 1
chr11:123059669|123059917 hsa-miR-522-5p 0 0 1
chr11:123059669|123059917 hsa-miR-522-3p 0 0 1
chr11:123059669|123059917 hsa-miR-545-5p 0 0 1
chr11:123059669|123059917 hsa-miR-545-3p 0 0 1
chr11:123059669|123059917 hsa-miR-563 0 0 1
chr11:123059669|123059917 hsa-miR-564 0 0 1
chr11:123059669|123059917 hsa-miR-591 0 0 1
chr11:123059669|123059917 hsa-miR-600 0 0 1
chr11:123059669|123059917 hsa-miR-607 0 0 1
chr11:123059669|123059917 hsa-miR-661 1 1 1
chr11:123059669|123059917 hsa-miR-892b 0 0 1
chr11:123059669|123059917 hsa-miR-942-5p 0 0 1
chr11:123059669|123059917 hsa-miR-942-3p 0 0 1
chr11:123059669|123059917 hsa-miR-1179 0 0 1
chr11:123059669|123059917 hsa-miR-1229-5p 0 0 1
chr11:123059669|123059917 hsa-miR-1229-3p 0 0 1
chr11:123059669|123059917 hsa-miR-1237-5p 0 0 1
chr11:123059669|123059917 hsa-miR-1237-3p 0 0 1
chr11:123059669|123059917 hsa-miR-1287-5p 0 0 1
chr11:123059669|123059917 hsa-miR-1287-3p 0 0 1
chr11:123059669|123059917 hsa-miR-1248 0 1 1
chr11:123059669|123059917 hsa-miR-513b-5p 0 0 1
chr11:123059669|123059917 hsa-miR-513b-3p 0 0 1
chr11:123059669|123059917 hsa-miR-512-5p 0 0 1
chr11:123059669|123059917 hsa-miR-193a-3p 0 0 1
chr11:123059669|123059917 hsa-miR-515-5p 0 0 1
chr11:123059669|123059917 hsa-miR-7 0 0 1
chr11:123059669|123059917 hsa-miR-453 0 0 1
chr11:123059669|123059917 hsa-miR-376a 0 0 1
chr11:123059669|123059917 hsa-miR-601 1 0 0
chr11:123059669|123059917 hsa-miR-762 1 0 0
chr11:123059669|123059917 hsa-miR-3176 0 1 0
chr11:123059669|123059917 hsa-miR-4420 0 1 0
chr11:123059669|123059917 hsa-miR-3976 0 1 0
chr11:123059669|123059917 hsa-miR-4706 1 0 0
chr11:123059669|123059917 hsa-miR-5787 1 0 0
chr11:123059669|123059917 hsa-miR-6077 0 1 0
chr11:123059669|123059917 hsa-miR-6090 1 0 0
chr11:123059669|123059917 hsa-miR-8085 1 0 0
chr11:123059669|123059917 hsa-miR-9718 1 0 0
chr11:123059669|123059917 hsa-miR-22-5p 0 1 0
chr11:123059669|123059917 hsa-miR-3622a-5p 1 0 0
chr11:123059669|123059917 hsa-miR-6880-5p 1 0 0
chr11:123059669|123059917 hsa-miR-7847-3p 1 0 0
chr11:123059669|123059917 hsa-miR-6741-5p 1 1 0
chr11:123059669|123059917 hsa-miR-6721-5p 1 0 0
chr11:123059669|123059917 hsa-miR-6776-5p 1 1 0
chr11:123059669|123059917 hsa-miR-6868-3p 0 1 0
chr11:123059669|123059917 hsa-miR-6749-5p 1 0 0
chr11:123059669|123059917 hsa-miR-149-3p 1 0 0
chr11:123059669|123059917 hsa-miR-4695-3p 0 1 0
chr11:123059669|123059917 hsa-miR-4750-5p 1 1 0
chr11:123059669|123059917 hsa-miR-6741-3p 1 0 0
chr11:123059669|123059917 hsa-miR-758-5p 0 1 0
chr11:123059669|123059917 hsa-miR-6755-3p 0 1 0
chr11:123059669|123059917 hsa-miR-1298-5p 0 1 0
chr11:123059669|123059917 hsa-miR-4802-5p 0 1 0
chr11:123059669|123059917 hsa-miR-6841-5p 0 1 0
chr11:123059669|123059917 hsa-miR-7107-5p 1 0 0
chr11:123059669|123059917 hsa-miR-4728-5p 1 0 0
chr11:123059669|123059917 hsa-miR-5189-5p 1 0 0
chr11:123059669|123059917 hsa-miR-6846-5p 1 0 0
chr11:123059669|123059917 hsa-miR-6883-5p 1 0 0
chr11:123059669|123059917 hsa-miR-6731-5p 1 0 0
chr11:123059669|123059917 hsa-miR-6856-5p 0 1 0
chr11:123059669|123059917 hsa-miR-7156-5p 0 1 0
chr11:123059669|123059917 hsa-miR-494-5p 1 1 0
chr11:123059669|123059917 hsa-miR-195-3p 0 1 0
chr11:123059669|123059917 hsa-miR-380-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:123059669|123059917
ORF Type ORF1
Protein Length 81
Nucleotide Length 243
Protein Sequence MGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNAD
Nucleotide Sequence TTGGGTGGAGAAGATTTTGACAACCGAATGGTCAACCATTTTATTGCTGAGTTTAAGCGCAAGCATAAGAAGGACATCAGTGAGAACAAGAGAGCTGTAAGACGCCTCCGTACTGCTTGTGAACGTGCTAAGCGTACCCTCTCTTCCAGCACCCAGGCCAGTATTGAGATCGATTCTCTCTATGAAGGAATCGACTTCTATACCTCCATTACCCGTGCCCGATTTGAAGAACTGAATGCTGAC
CircID chr11:123059669|123059917
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MTTEWSTILLLSLSASIRRTSVRTREL
Nucleotide Sequence TTGACAACCGAATGGTCAACCATTTTATTGCTGAGTTTAAGCGCAAGCATAAGAAGGACATCAGTGAGAACAAGAGAGCTGTAA
CircID chr11:123059669|123059917
ORF Type ORF3
Protein Length 40
Nucleotide Length 123
Protein Sequence MLVNVLSVPSLPAPRPVLRSILSMKESTSIPPLPVPDLKN
Nucleotide Sequence CTGCTTGTGAACGTGCTAAGCGTACCCTCTCTTCCAGCACCCAGGCCAGTATTGAGATCGATTCTCTCTATGAAGGAATCGACTTCTATACCTCCATTACCCGTGCCCGATTTGAAGAACTGA
CircID chr11:123059669|123059917
ORF Type ORF4
Protein Length 54
Nucleotide Length 162
Protein Sequence MGAGREGTLSTFTSSTEASYSSLVLTDVLLMLALKLSNKMVDHSVVKIFSTQVG
Nucleotide Sequence CTGGGTGCTGGAAGAGAGGGTACGCTTAGCACGTTCACAAGCAGTACGGAGGCGTCTTACAGCTCTCTTGTTCTCACTGATGTCCTTCTTATGCTTGCGCTTAAACTCAGCAATAAAATGGTTGACCATTCGGTTGTCAAAATCTTCTCCACCCAAGTGGGT
CircID chr11:123059669|123059917
ORF Type ORF5
Protein Length 55
Nucleotide Length 165
Protein Sequence MAWVLEERVRLARSQAVRRRLTALLFSLMSFLCLRLNSAIKWLTIRLSKSSPPKW
Nucleotide Sequence CTGGCCTGGGTGCTGGAAGAGAGGGTACGCTTAGCACGTTCACAAGCAGTACGGAGGCGTCTTACAGCTCTCTTGTTCTCACTGATGTCCTTCTTATGCTTGCGCTTAAACTCAGCAATAAAATGGTTGACCATTCGGTTGTCAAAATCTTCTCCACCCAAGTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab