CircNet

General Information

circRNA Basic Information

CircID	chr11:123577367\|123596037
Strand	+
CircType	exon
Host Gene	ENSG00000023171.15;
Algorism	find_circ;CIRI2;DCC;
Sequence	CACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAGGACGGAGACACCATGGTGGAGAAGGGCTCAGATCACTCCTCGGACAAGTCCCCGTCCACACCGGAGCAGGGCGTGCAGCGCAGCTGCTCCTCCCAGTCCGGCCGGAGCGGCGGCAAGAATTCCAAGAAAAGCCAGAGTTGGTATAATCTGACAGTCCGTTTGAAAGACATCTGTTCCATGACTAAAGAAAAAACAGCTCGCCTCATTCCCAATGCCATCCAAGTTTGCACTGATTCAGAAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr11:123577367\|123596037
ORF Type	ORF1
Protein Length	77
Nucleotide Length	231
Protein Sequence	MVEKGSDHSSDKSPSTPEQGVQRSCSSQSGRSGGKNSKKSQSWYNLTVRLKDICSMTKEKTARLIPNAIQVCTDSEK
Nucleotide Sequence	ATGGTGGAGAAGGGCTCAGATCACTCCTCGGACAAGTCCCCGTCCACACCGGAGCAGGGCGTGCAGCGCAGCTGCTCCTCCCAGTCCGGCCGGAGCGGCGGCAAGAATTCCAAGAAAAGCCAGAGTTGGTATAATCTGACAGTCCGTTTGAAAGACATCTGTTCCATGACTAAAGAAAAAACAGCTCGCCTCATTCCCAATGCCATCCAAGTTTGCACTGATTCAGAAAAG

CircID	chr11:123577367\|123596037
ORF Type	ORF2
Protein Length	62
Nucleotide Length	186
Protein Sequence	MALGMRRAVFSLVMEQMSFKRTVRLYQLWLFLEFLPPLRPDWEEQLRCTPCSGVDGDLSEE*
Nucleotide Sequence	ATGGCATTGGGAATGAGGCGAGCTGTTTTTTCTTTAGTCATGGAACAGATGTCTTTCAAACGGACTGTCAGATTATACCAACTCTGGCTTTTCTTGGAATTCTTGCCGCCGCTCCGGCCGGACTGGGAGGAGCAGCTGCGCTGCACGCCCTGCTCCGGTGTGGACGGGGACTTGTCCGAGGAGTGA

CircID	chr11:123577367\|123596037
ORF Type	ORF3
Protein Length	33
Nucleotide Length	99
Protein Sequence	MVSPSWFCGVGERDRFRRMGEQAGVLRLELLAV
Nucleotide Sequence	ATGGTGTCTCCGTCCTGGTTCTGCGGGGTTGGCGAGCGAGACCGCTTCCGGAGGATGGGCGAGCAGGCCGGCGTGCTGCGGTTGGAGTTACTGGCAGTG

CircID	chr11:123577367\|123596037
ORF Type	ORF4
Protein Length	78
Nucleotide Length	234
Protein Sequence	LPVTPTAARRPARPSSGSGLARQPRRTRTETPWWRRAQITPRTSPRPHRSRACSAAAPPSPAGAAARIPRKARVGII*
Nucleotide Sequence	CTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCCTCCGGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAGGACGGAGACACCATGGTGGAGAAGGGCTCAGATCACTCCTCGGACAAGTCCCCGTCCACACCGGAGCAGGGCGTGCAGCGCAGCTGCTCCTCCCAGTCCGGCCGGAGCGGCGGCAAGAATTCCAAGAAAAGCCAGAGTTGGTATAATCTGA

CircID	chr11:123577367\|123596037
ORF Type	ORF5
Protein Length	65
Nucleotide Length	195
Protein Sequence	LDGIGNEASCFFFSHGTDVFQTDCQIIPTLAFLGILAAAPAGLGGAAALHALLRCGRGLVRGVI*
Nucleotide Sequence	TTGGATGGCATTGGGAATGAGGCGAGCTGTTTTTTCTTTAGTCATGGAACAGATGTCTTTCAAACGGACTGTCAGATTATACCAACTCTGGCTTTTCTTGGAATTCTTGCCGCCGCTCCGGCCGGACTGGGAGGAGCAGCTGCGCTGCACGCCCTGCTCCGGTGTGGACGGGGACTTGTCCGAGGAGTGATCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr11:123577367\|123596037	WTAP	1	0	0
chr11:123577367\|123596037	HNRNPA1	1	0	0
chr11:123577367\|123596037	FUS	3	2	0
chr11:123577367\|123596037	ACIN1	0	0	3
chr11:123577367\|123596037	CSTF2	0	2	0
chr11:123577367\|123596037	TARDBP	3	0	0
chr11:123577367\|123596037	HNRNPM	1	0	0
chr11:123577367\|123596037	TAF15	1	1	0
chr11:123577367\|123596037	FMR1	0	1	1
chr11:123577367\|123596037	FIP1L1	1	0	0
chr11:123577367\|123596037	U2AF2	2	2	0
chr11:123577367\|123596037	HNRNPC	1	0	0
chr11:123577367\|123596037	PTBP1	6	0	0
chr11:123577367\|123596037	EIF4A3	12	3	3
chr11:123577367\|123596037	AGO2	0	0	2

CircRNA Information