CircRNA Information

General Information
circRNA Basic Information
CircID chr11:124884500|124884619
Strand +
CircType exon
Host Gene ENSG00000154133.13;
Algorism CIRI2;
Sequence CAGGTTGTTTTGGCCTGAGGAGCAGCCCTGCCTGCTGCTCTTCCCCCACCATTTGGATCACAGGAAGTGGAGGAGCCAGAGGTGCCTTTGTGGAGGACAGCAGTGGCTGCTGGGAGAGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:124884500|124884619 hsa-miR-15a-5p 0 0 1
chr11:124884500|124884619 hsa-miR-15a-3p 0 0 1
chr11:124884500|124884619 hsa-miR-214-5p 0 0 1
chr11:124884500|124884619 hsa-miR-214-3p 0 0 1
chr11:124884500|124884619 hsa-miR-15b-5p 0 0 1
chr11:124884500|124884619 hsa-miR-15b-3p 0 0 1
chr11:124884500|124884619 hsa-miR-149-5p 0 0 1
chr11:124884500|124884619 hsa-miR-149-3p 0 0 1
chr11:124884500|124884619 hsa-miR-150-5p 0 0 1
chr11:124884500|124884619 hsa-miR-150-3p 0 0 1
chr11:124884500|124884619 hsa-miR-195-5p 0 0 1
chr11:124884500|124884619 hsa-miR-195-3p 0 0 1
chr11:124884500|124884619 hsa-miR-424-5p 0 0 1
chr11:124884500|124884619 hsa-miR-424-3p 0 0 1
chr11:124884500|124884619 hsa-miR-497-5p 0 0 1
chr11:124884500|124884619 hsa-miR-497-3p 0 0 1
chr11:124884500|124884619 hsa-miR-522-5p 0 0 1
chr11:124884500|124884619 hsa-miR-522-3p 0 0 1
chr11:124884500|124884619 hsa-miR-506-5p 0 0 1
chr11:124884500|124884619 hsa-miR-506-3p 0 0 1
chr11:124884500|124884619 hsa-miR-625-5p 0 0 1
chr11:124884500|124884619 hsa-miR-625-3p 0 0 1
chr11:124884500|124884619 hsa-miR-626 0 0 1
chr11:124884500|124884619 hsa-miR-640 0 0 1
chr11:124884500|124884619 hsa-miR-541-5p 0 0 1
chr11:124884500|124884619 hsa-miR-541-3p 0 0 1
chr11:124884500|124884619 hsa-miR-940 0 1 1
chr11:124884500|124884619 hsa-miR-1275 0 1 1
chr11:124884500|124884619 hsa-miR-532-3p 0 0 1
chr11:124884500|124884619 hsa-miR-654-5p 0 0 1
chr11:124884500|124884619 hsa-miR-1207-5p 0 0 1
chr11:124884500|124884619 hsa-miR-16 0 0 1
chr11:124884500|124884619 hsa-miR-124 0 0 1
chr11:124884500|124884619 hsa-miR-663a 1 0 0
chr11:124884500|124884619 hsa-miR-548m 0 1 0
chr11:124884500|124884619 hsa-miR-2278 0 1 0
chr11:124884500|124884619 hsa-miR-3183 0 1 0
chr11:124884500|124884619 hsa-miR-4268 0 1 0
chr11:124884500|124884619 hsa-miR-4271 0 1 0
chr11:124884500|124884619 hsa-miR-4514 0 1 0
chr11:124884500|124884619 hsa-miR-548an 0 1 0
chr11:124884500|124884619 hsa-miR-4692 0 1 0
chr11:124884500|124884619 hsa-miR-6077 0 1 0
chr11:124884500|124884619 hsa-miR-6132 0 1 0
chr11:124884500|124884619 hsa-miR-1972 0 1 0
chr11:124884500|124884619 hsa-miR-6892-3p 0 1 0
chr11:124884500|124884619 hsa-miR-6880-5p 0 1 0
chr11:124884500|124884619 hsa-miR-6762-3p 0 1 0
chr11:124884500|124884619 hsa-miR-7110-3p 0 1 0
chr11:124884500|124884619 hsa-miR-503-5p 0 1 0
chr11:124884500|124884619 hsa-miR-4713-5p 0 1 0
chr11:124884500|124884619 hsa-miR-4690-5p 0 1 0
chr11:124884500|124884619 hsa-miR-3191-5p 1 1 0
chr11:124884500|124884619 hsa-miR-6782-3p 0 1 0
chr11:124884500|124884619 hsa-miR-7152-5p 0 1 0
chr11:124884500|124884619 hsa-miR-4763-3p 1 1 0
chr11:124884500|124884619 hsa-miR-7111-5p 0 1 0
chr11:124884500|124884619 hsa-miR-6780b-5p 0 1 0
chr11:124884500|124884619 hsa-miR-6836-5p 0 1 0
chr11:124884500|124884619 hsa-miR-4725-3p 0 1 0
chr11:124884500|124884619 hsa-miR-4665-5p 0 1 0
chr11:124884500|124884619 hsa-miR-6792-3p 0 1 0
chr11:124884500|124884619 hsa-miR-6862-3p 1 0 0
chr11:124884500|124884619 hsa-miR-4723-3p 1 0 0
chr11:124884500|124884619 hsa-miR-4691-5p 0 1 0
chr11:124884500|124884619 hsa-miR-3619-5p 0 1 0
chr11:124884500|124884619 hsa-miR-6838-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:124884500|124884619
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MPAALPPPFGSQEVEEPEVPLWRTAVAAGRG
Nucleotide Sequence CTGCCTGCTGCTCTTCCCCCACCATTTGGATCACAGGAAGTGGAGGAGCCAGAGGTGCCTTTGTGGAGGACAGCAGTGGCTGCTGGGAGAGGG

CircID chr11:124884500|124884619
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MFWPEEQPCLLLFPHHLDHRKWRSQRCLCGGQQWLLGE
Nucleotide Sequence TTGTTTTGGCCTGAGGAGCAGCCCTGCCTGCTGCTCTTCCCCCACCATTTGGATCACAGGAAGTGGAGGAGCCAGAGGTGCCTTTGTGGAGGACAGCAGTGGCTGCTGGGAGAG

CircID chr11:124884500|124884619
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MRSSPACCSSPTIWITGSGGARGAFVEDSSGCWER
Nucleotide Sequence CTGAGGAGCAGCCCTGCCTGCTGCTCTTCCCCCACCATTTGGATCACAGGAAGTGGAGGAGCCAGAGGTGCCTTTGTGGAGGACAGCAGTGGCTGCTGGGAGAGG

CircID chr11:124884500|124884619
ORF Type ORF4
Protein Length 34
Nucleotide Length 102
Protein Sequence MLSSTKAPLAPPLPVIQMVGEEQQAGLLLRPKQP
Nucleotide Sequence CTGCTGTCCTCCACAAAGGCACCTCTGGCTCCTCCACTTCCTGTGATCCAAATGGTGGGGGAAGAGCAGCAGGCAGGGCTGCTCCTCAGGCCAAAACAACCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites