CircRNA Information

General Information
circRNA Basic Information
CircID chr11:126263771|126263914
Strand +
CircType exon
Host Gene ENSG00000182934.10;
Algorism CIRI2;
Sequence GTGGCTCTTGCCCAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCTTGTGGCTCCTTCCAACCCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:126263771|126263914 hsa-miR-31-5p 0 0 1
chr11:126263771|126263914 hsa-miR-31-3p 0 0 1
chr11:126263771|126263914 hsa-miR-335-5p 0 0 1
chr11:126263771|126263914 hsa-miR-335-3p 0 0 1
chr11:126263771|126263914 hsa-miR-526b-5p 0 0 1
chr11:126263771|126263914 hsa-miR-526b-3p 0 0 1
chr11:126263771|126263914 hsa-miR-1178-5p 0 0 1
chr11:126263771|126263914 hsa-miR-1178-3p 0 0 1
chr11:126263771|126263914 hsa-miR-491-5p 0 0 1
chr11:126263771|126263914 hsa-miR-657 0 1 0
chr11:126263771|126263914 hsa-miR-2110 1 1 0
chr11:126263771|126263914 hsa-miR-3153 0 1 0
chr11:126263771|126263914 hsa-miR-3154 0 1 0
chr11:126263771|126263914 hsa-miR-4322 1 0 0
chr11:126263771|126263914 hsa-miR-3943 0 1 0
chr11:126263771|126263914 hsa-miR-4467 1 0 0
chr11:126263771|126263914 hsa-miR-4533 0 1 0
chr11:126263771|126263914 hsa-miR-3960 1 0 0
chr11:126263771|126263914 hsa-miR-6085 1 0 0
chr11:126263771|126263914 hsa-miR-6132 1 0 0
chr11:126263771|126263914 hsa-miR-8053 0 1 0
chr11:126263771|126263914 hsa-miR-8072 1 0 0
chr11:126263771|126263914 hsa-miR-6857-5p 1 0 0
chr11:126263771|126263914 hsa-miR-6759-5p 1 0 0
chr11:126263771|126263914 hsa-miR-6742-5p 1 0 0
chr11:126263771|126263914 hsa-miR-6796-5p 1 0 0
chr11:126263771|126263914 hsa-miR-296-3p 1 0 0
chr11:126263771|126263914 hsa-miR-449b-3p 0 1 0
chr11:126263771|126263914 hsa-miR-4524b-3p 0 1 0
chr11:126263771|126263914 hsa-miR-10400-5p 1 0 0
chr11:126263771|126263914 hsa-miR-6812-5p 1 0 0
chr11:126263771|126263914 hsa-miR-6763-5p 1 0 0
chr11:126263771|126263914 hsa-miR-5196-5p 1 0 0
chr11:126263771|126263914 hsa-miR-6780b-5p 1 0 0
chr11:126263771|126263914 hsa-miR-4725-3p 1 0 0
chr11:126263771|126263914 hsa-miR-6731-5p 1 0 0
chr11:126263771|126263914 hsa-miR-4665-5p 1 0 0
chr11:126263771|126263914 hsa-miR-6855-5p 0 1 0
chr11:126263771|126263914 hsa-miR-4747-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:126263771|126263914
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MPNTKSPLSPQALLPVSRMCFRVCEQPVFSVVQRQSEGACGSFQP
Nucleotide Sequence TTGCCCAATACCAAATCGCCGCTTTCCCCACAAGCCCTTCTTCCTGTATCAAGAATGTGCTTTAGAGTATGTGAGCAACCTGTCTTCAGTGTAGTACAAAGGCAGAGTGAGGGGGCTTGTGGCTCCTTCCAACCC

CircID chr11:126263771|126263914
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MKTGCSHTLKHILDTGRRACGESGDLVLGKSH
Nucleotide Sequence CTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGATACAGGAAGAAGGGCTTGTGGGGAAAGCGGCGATTTGGTATTGGGCAAGAGCCAC

CircID chr11:126263771|126263914
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MEGATSPLTLPLYYTEDRLLTYSKAHS
Nucleotide Sequence TTGGAAGGAGCCACAAGCCCCCTCACTCTGCCTTTGTACTACACTGAAGACAGGTTGCTCACATACTCTAAAGCACATTCTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites