CircRNA Information

General Information
circRNA Basic Information
CircID chr11:126265745|126266018
Strand -
CircType exon
Host Gene ENSG00000182934.10;
Algorism CIRI2;
Sequence GTCCCCATCACCTTCCCTTCCAACTTGTTGGCAACAGATTCACAGAGCTGGACGGCAATGTCTGCAGCCACGTTCTTAGCTGAGGAGAGGGGGACAGGTATGTCAGTTCCATGTCAGCAATGACCAATCTTTATGGTACAGGTGAGAAACGCTAGGTGATTCTGCTCTCAACTACCCCTATCCCGCGAGTATGAGTCAGCCCGGTCCTCAGAACTTACCAATGAGATGATCACGCATCTTGTCCAGCACAGATTCCATGTCTTCACGACTCAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:126265745|126266018 hsa-miR-345-5p 0 0 1
chr11:126265745|126266018 hsa-miR-345-3p 0 0 1
chr11:126265745|126266018 hsa-miR-604 0 0 1
chr11:126265745|126266018 hsa-miR-616-5p 0 0 1
chr11:126265745|126266018 hsa-miR-616-3p 0 0 1
chr11:126265745|126266018 hsa-miR-627-5p 0 0 1
chr11:126265745|126266018 hsa-miR-627-3p 0 0 1
chr11:126265745|126266018 hsa-miR-641 0 0 1
chr11:126265745|126266018 hsa-miR-647 0 0 1
chr11:126265745|126266018 hsa-miR-1229-5p 0 0 1
chr11:126265745|126266018 hsa-miR-1229-3p 0 0 1
chr11:126265745|126266018 hsa-miR-1287-5p 0 0 1
chr11:126265745|126266018 hsa-miR-1287-3p 0 0 1
chr11:126265745|126266018 hsa-miR-1257 0 0 1
chr11:126265745|126266018 hsa-miR-1267 0 0 1
chr11:126265745|126266018 hsa-miR-486-5p 0 0 1
chr11:126265745|126266018 hsa-miR-1224-5p 0 0 1
chr11:126265745|126266018 hsa-miR-509-3p 0 0 1
chr11:126265745|126266018 hsa-miR-628-5p 0 0 1
chr11:126265745|126266018 hsa-miR-548b-3p 0 0 1
chr11:126265745|126266018 hsa-miR-612 1 0 0
chr11:126265745|126266018 hsa-miR-3137 1 0 0
chr11:126265745|126266018 hsa-miR-3166 1 0 0
chr11:126265745|126266018 hsa-miR-3135b 1 0 0
chr11:126265745|126266018 hsa-miR-4656 1 0 0
chr11:126265745|126266018 hsa-miR-8089 1 0 0
chr11:126265745|126266018 hsa-miR-4728-3p 1 0 0
chr11:126265745|126266018 hsa-miR-6821-5p 1 0 0
chr11:126265745|126266018 hsa-miR-3944-3p 1 0 0
chr11:126265745|126266018 hsa-miR-6748-3p 1 0 0
chr11:126265745|126266018 hsa-miR-3670 1 0 0
chr11:126265745|126266018 hsa-miR-5001-5p 1 0 0
chr11:126265745|126266018 hsa-miR-3127-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:126265745|126266018
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MLATDSQSWTAMSAATFLAEERGTGMSVPCQQ
Nucleotide Sequence TTGTTGGCAACAGATTCACAGAGCTGGACGGCAATGTCTGCAGCCACGTTCTTAGCTGAGGAGAGGGGGACAGGTATGTCAGTTCCATGTCAGCAATGA

CircID chr11:126265745|126266018
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence MVIADMELTYLSPSPQLRTWLQTLPSSSVNLLPTSWKGR
Nucleotide Sequence TTGGTCATTGCTGACATGGAACTGACATACCTGTCCCCCTCTCCTCAGCTAAGAACGTGGCTGCAGACATTGCCGTCCAGCTCTGTGAATCTGTTGCCAACAAGTTGGAAGGGAAGGTGA

CircID chr11:126265745|126266018
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MCWTRCVIISLVSSEDRADSYSRDRGS
Nucleotide Sequence CTGTGCTGGACAAGATGCGTGATCATCTCATTGGTAAGTTCTGAGGACCGGGCTGACTCATACTCGCGGGATAGGGGTAGTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites